Publications

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J. Hamaide, De Groof, G., Van Steenkiste, G., Jeurissen, B., Van Audekerke, J., Naeyaert, M., Van Ruijssevelt, L., Cornil, C., Sijbers, J., Verhoye, M., and Van Der Linden, A., “ Exploring sex differences in the adult zebra finch brain: In vivo diffusion tensor imaging and ex vivo super-resolution track density imaging”, NeuroImage, vol. 146, pp. 789-803, 2017.
X. Haijen, Koirala, B., Tao, X., and Scheunders, P., “A Benchmark Linear Unmixing Dataset With Spectral Variability and Ground Truth”, in 2025 15th Workshop on Hyperspectral Imaging and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2025, pp. 1-5.PDF icon a_benchmark_linear_unmixing_dataset_with_spectral_variability_and_ground_truth.pdf (2.62 MB)
X. Haijen, Koirala, B., Tao, X., and Scheunders, P., “A Two-Step Linear Mixing Model for Unmixing Under Hyperspectral Variability”, in IGARSS 2025 - 2025 IEEE International Geoscience and Remote Sensing Symposium, 2025, pp. 8707-8711.PDF icon a_two_step_linear_mixing_model_for_unmixing_under_hyperspectral_variability.pdf (1.11 MB)
B. Haest, Vanden Borre, J., Spanhove, T., Thoonen, G., Delalieux, S., Kooistra, L., Mücher, C. A., Paelinckx, D., Scheunders, P., and Kempeneers, P., “Habitat mapping and quality assessment of NATURA 2000 Heatland using airborne imaging spectroscopy”, Remote Sensing, vol. 9, no. 3, 2017.
B. Haest, Thoonen, G., Vanden Borre, J., Spanhove, T., Delalieux, S., Bertels, L., Kooistra, L., Mücher, C. A., and Scheunders, P., “An object-based approach to quantity and quality assessment of heathland habitats in the framework of NATURA 2000 using hyperspectral airborne AHS images.”, in Proceedings of GEOBIA 2010, the Geographic Object-Based Image Analysis Conference, 2010, vol. XXXVIII-4/C7.
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C. Gupta, Van de Casteele, E., and Chakravartty, J. K., “Imaging of voids due to deformation in alloy steel using micro-focus X-ray beam”, Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, vol. 267, no. 20, pp. 3488 - 3490, 2009.
W. Guo, Hung, C. - C., Scheunders, P., Kuo, B. - C., Lan, Y., and Ma, Z., “Advanced techniques for computational and information sciences”, Mathematical Problems in Engineering, vol. 2016, 2016.
C. Guglielmetti, Veraart, J., Roelant, E., Mai, Z., Daans, J., Van Audekerke, J., Naeyaert, M., Vanhoutte, G., Delgado Y Palacios, R., Praet, J., Fieremans, E., Ponsaerts, P., Sijbers, J., Van Der Linden, A., and Verhoye, M., “Diffusion kurtosis imaging probes cortical alterations and white matter pathology following cuprizone-induced demyelination and spontaneous remyelination”, NeuroImage, vol. 125, pp. 363–377, 2016.
C. Guglielmetti, Veraart, J., Roelant, E., Mai, Z., Daans, J., Van Audekerke, J., Praet, J., Ponsaerts, P., Sijbers, J., Van Der Linden, A., and Verhoye, M., “Diffusion kurtosis imaging probes cortical alterations and white matter pathology following cuprizone-induced demyelination and spontaneous remyelination”, ISMRM 23th Annual Meeting, Toronto, Ontario, Canada, vol. 23. 2015.PDF icon Download abstract (866.27 KB)
J. Grammens, Van Haver, A., Danckaers, F., Vuylsteke, K., Sijbers, J., Mahluf, L., Angele, P., Kon, E., and Verdonk, P., “Three-dimensional bone morphology is a risk factor for medial postmeniscectomy syndrome: A retrospective cohort study”, Journal of Experimental Orthopaedics, vol. 11, no. 3, p. e12090, 2024.
J. Grammens, “Shaping the future: 3D knee morphology analysis and predictive models for data-driven patient selection”, 2025.PDF icon Download thesis (4.98 MB)
J. Grammens, Van Haver, A., Lumban-Gaol, I., Danckaers, F., Verdonk, P., and Sijbers, J., “Automated landmark annotation for morphometric analysis of distal femur and proximal tibia”, Journal of Imaging, vol. 10, no. 4, 2024.PDF icon Download paper (2.06 MB)
J. Grammens, Van Haver, A., Danckaers, F., Booth, B. G., Sijbers, J., and Verdonk, P., “Small medial femoral condyle morphotype is associated with medial compartment degeneration and distinct morphological characteristics: a comparative pilot study”, Knee Surgery, Sports Traumatology, Arthroscopy, no. 686 , 2020.
J. Goyens, Vasilopoulou-Kampitsi, M., Claes, R., Sijbers, J., and Mancini, L., “Enhanced contrast in X-ray microtomographic images of the membranous labyrinth using different X-ray sources and scanning modes”, Journal of Anatomy, vol. 233, p. 770--782, 2018.PDF icon Download paper (1.44 MB)
L. Goto, Huysmans, T., Lee, W., Molenbroek, J. F. M., and Goossens, R., “A Comparison Between Representative 3D Faces Based on Bi- and Multi-variate and Shape Based Analysis”, in Proceedings of the 20th Congress of the International Ergonomics Association (IEA 2018)- Volume VII, 2019, vol. VII, pp. 1355–1364.
B. Goris, De Beenhouwer, J., De Backer, A., Zanaga, D., Batenburg, K. J., Sánchez-Iglesias, A., Liz-Marzán, L. M., Van Aert, S., Bals, S., Sijbers, J., and Van Tendeloo, G., “Measuring Lattice Strain in Three Dimensions through Electron Microscopy”, Nano Letters, vol. 15, no. 10, pp. 6996–7001, 2015.
B. Goris, De Beenhouwer, J., De Backer, A., Zanaga, D., Batenburg, K. J., Sánchez-Iglesias, A., Liz-Marzán, L. M., Van Aert, S., Sijbers, J., Van Tendeloo, G., and Bals, S., “Investigating lattice strain in Au nanodecahedrons”, European Microscopy Congress 2016. 2016.
B. Goris, Roelandts, T., Batenburg, K. J., Heidari Mezerji, H., and Bals, S., “Advanced reconstruction algorithms for electron tomography: from comparison to combination”, Ultramicroscopy, vol. 127, pp. 40–47, 2013.
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., “Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question”, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
J. Gonnissen, De Backer, A., den Dekker, A. J., Martinez, G. T., Rosenauer, A., Sijbers, J., and Van Aert, S., “Optimal experimental design for the detection of light atoms from high-resolution scanning transmission electron microscopy images”, Applied Physics Letters, vol. 105, no. 063116, 2014.
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., “Detecting and locating light atoms from high-resolution STEM images: the quest for a single optimal design Ultramicroscopy”, Ultramicroscopy, vol. 170, pp. 128-138, 2016.
J. Gonnissen, “Optimal statistical experiment design for detecting and locating light atoms using quantitative high resolution (scanning) transmission electron microscopy”, 2017.PDF icon Download thesis (8.1 MB)
D. Giraldo, “Computational anatomy strategies for characterization of brain patterns associated with Alzheimer's disease”, 2022.PDF icon Download PhD thesis (25.92 MB)
D. Giraldo, Beirinckx, Q., den Dekker, A. J., Jeurissen, B., and Sijbers, J., “Super-resolution reconstruction of multi-slice T2-w FLAIR MRI improves Multiple Sclerosis lesion segmentation”, in 45th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Sydney, Australia, 2023.
D. Giraldo, Sijbers, J., and Romero, E., “Quantification of cognitive impairment to characterize heterogeneity of patients at risk of developing Alzheimer's disease dementia”, Alzheimer’s & Dementia: Diagnosis, Assessment & Disease Monitoring, vol. 13, no. 1, p. e12237, 2021.

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