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M. Siqueira Pinto, “Improved Diagnosis and Prognosis of Mild Traumatic Brain Injury via Harmonised Diffusion MRI”, 2025.

M. Siqueira Pinto, Winzeck, S., Kornaropoulos, E. N., Richter, S., Paolella, R., Correia, M. M., Glocker, B., Williams, G., Vik, A., Posti, J., Håberg, A. Kristine, Stenberg, J., Guns, P. - J., den Dekker, A. J., Menon, D. K., Sijbers, J., Van Dyck, P., and Newcombe, V. F. J., “Use of support vector machines approach via ComBat harmonized diffusion tensor imaging for the diagnosis and prognosis of mild traumatic brain injury: a CENTER-TBI study”, Journal of Neurotrauma, vol. 40, no. 13-14, pp. 1317-1338, 2023.

N. Six, Renders, J., Sijbers, J., and De Beenhouwer, J., “Gauss-Newton-Krylov for Reconstruction of Polychromatic X-ray CT Images”, IEEE Transactions on Computational Imaging, vol. 7, pp. 1304-1313, 2021.

N. Six, Renders, J., De Beenhouwer, J., and Sijbers, J., “Joint reconstruction of attenuation, refraction and dark field X-ray phase contrasts using split Barzilai-Borwein steps”, in SPIE Optical Engineering: Developments in X-Ray Tomography XIV , 2022, vol. 12242, p. 122420O.

N. Six, De Beenhouwer, J., Van Nieuwenhove, V., Vanroose, W., and Sijbers, J., “Joint reconstruction and flat-field estimation using support estimation”, in IEEE Nuclear Science Symposium and Medical Imaging Conference, Sydney, Australia, 2018.

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N. Six, Renders, J., De Beenhouwer, J., and Sijbers, J., “Joint multi-contrast CT for edge illumination X-ray phase contrast imaging using split Barzilai-Borwein steps”, Optics Express, vol. 32, no. 2, pp. 1135-1150, 2024.

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N. Six, De Beenhouwer, J., and Sijbers, J., “poly-DART: A discrete algebraic reconstruction technique for polychromatic X-ray CT”, Optics Express, vol. 27, no. 23, pp. 33427-33435, 2019.

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N. Six, “Improved X-ray CT reconstruction techniques with non-linear imaging models”, 2024.

N. Six, Renders, J., Sijbers, J., and De Beenhouwer, J., “Newton-Krylov Methods For Polychromatic X-Ray CT”, in 2020 IEEE International Conference on Image Processing (ICIP), Abu Dhabi, 2020, pp. 3045-3049.

N. Six, De Beenhouwer, J., and Sijbers, J., “pDART: Discrete algebraic reconstruction using a polychromatic forward model”, in The Fifth International Conference on Image Formation in X-Ray Computed Tomography, Salt Lake City, Utah, USA, 2018.

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C. Smekens, Vanhevel, F., Jeurissen, B., Van Dyck, P., Sijbers, J., and Janssens, T., “Short T2* quantification of knee structures based on accelerated UTE Spiral VIBE MRI with SPIRiT reconstruction”, Proc Intl Soc Mag Reson Med 28. p. 2687, 2020.

C. Smekens, Beirinckx, Q., Vanhevel, F., Van Dyck, P., den Dekker, A. J., Sijbers, J., Janssens, T., and Jeurissen, B., “Super-resolution T2* mapping of the knee using UTE Spiral VIBE MRI”, Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), 29th Annual Meeting, An Online Experience. p. 3920, 2021.

C. Smekens, Van Dyck, P., Janssens, T., Sijbers, J., and Jeurissen, B., “Data-driven characterization of knee structures using non-negative matrix factorization of quantitative UTE Spiral VIBE MRI”, Proc. Intl. Soc. Mag. Reson. Med. 31. 2022.

C. Smekens, Vanhevel, F., Beirinckx, Q., Janssens, T., and Van Dyck, P., “Accelerated Dual-contrast Three-dimensional Knee Magnetic Resonance Imaging Using Super-resolution Reconstructed Deep Learning-enhanced Two-dimensional Dixon Turbo Spin-echo Imaging”, Seminars in Musculoskeletal Radiology, vol. 27, no. S01. Thieme Medical Publishers, Inc., pp. 1-24, 2023.

C. Smekens, Beirinckx, Q., Vanhevel, F., Van Dyck, P., den Dekker, A. J., Sijbers, J., Janssens, T., and Jeurissen, B., “High-resolution T2* mapping of the knee based on UTE Spiral VIBE MRI”, Magn Reson Mater Phy, vol. 34. pp. S53-S54, 2021.

C. Smekens, Beirinckx, Q., Bosmans, F., Vanhevel, F., Snoeckx, A., Sijbers, J., Jeurissen, B., Janssens, T., and Van Dyck, P., “Deep Learning-Enhanced Accelerated 2D TSE and 3D Super-Resolution Dixon TSE for Rapid Comprehensive Knee Joint Assessment”, Investigative Radiology, vol. 60, no. 3, pp. 220-233, 2025.

C. Smekens, Vanhevel, F., Jeurissen, B., Van Dyck, P., Sijbers, J., and Janssens, T., “Short T2* quantification of knee structures based on accelerated UTE Spiral VIBE MRI with SPIRiT reconstruction”, 12th Annual Meeting of the ISMRM Benelux Chapter, Arnhem, The Netherlands. 2020.

C. Smekens, Van Dyck, P., Fuchs, P. S., Sijbers, J., Janssens, T., and Jeurissen, B., “Data-driven characterization of knee structures using non-negative matrix factorization of 3D multi-echo UTE MRI”, NMR in Biomedicine, vol. 39, no. 6, p. e70299, 2026.

B. de Smit, McClure, M., Palenstijn, W. J., Sparling, I. E., and Wagon, S., “Through the Looking-Glass, and What the Quadratic Camera Found There”, The Mathematical Intelligencer, vol. 34, no. 3, pp. 30 - 34, 2012.

R. E. Smith, Christiaens, D., Jeurissen, B., Pietsch, M., Vaughan, D. N., Jackson, G., and Tournier, J. D., “On false positive control in Fixel-Based Analysis”, Proc Intl Soc Mag Reson Med, vol. 29. 2021.

A. Smolders, Scheunders, P., Sijbers, J., Van Meir, V., Verhoye, M., and Van Der Linden, A., “Clustering of hemodynamic response functions from fMRI-data of a starling”, in 13th European Microscopy Congress, Antwerp, Belgium, 2004.

A. Smolders, Martino, D. F., Staeren, N., Scheunders, P., Sijbers, J., Goebel, R., and Formisano, E., “Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis”, Magnetic Resonance Imaging, vol. 25, pp. 860-868, 2007.

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A. Smolders, “Data-driven methods for the analysis of time-resolved mental chronometry fMRI data sets”, 2007.

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R. M. Soleimanzadeh, Karami, A., and Scheunders, P., “Fusion of hyperspectral and Lidar images using non-subsampled shearlet transform”, in IEEE IGARSS 2018, International Geoscience and Remote Sensing Symposium, Valencia, Spain, July 23-27, 2018.

J. Soons, Danckaers, F., Keustermans, W., Huysmans, T., Sijbers, J., Casselman, J. W., and Dirckx, J. J. J., “3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT”, Hearing research, vol. 340, pp. 79-88, 2016.

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