Publications

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2018
Z. Zahiri, Ribbens, B., Vanlanduit, S., and Scheunders, P., Automatic Detection of Surface Damages on Steel Structures using Near Infrared Hyperspectral Imaging, 9th Workshop on Hyperspectral Image and Signal Processing : Evolution in Remote Sensing (WHISPERS). 2018.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Lobato, I., and Van Aert, S., Bayesian analysis of noisy scanning transmission electron microscopy images for single atom detection, SCANDEM 2018, Technical University of Denmark, Kgs. Lyngby, Denmark. p. 95, 2018.
A. Van Ombergen, Wuyts, F. L., Jeurissen, B., Sijbers, J., Vanhevel, F., Jillings, S., Parizel, P. M., Sunaert, S., Van de Heyning, P. H., Dousset, V., Laureys, S. S. L., and Demertzi, A., Changes in intrinsic functional brain connectivity after first-time exposure to parabolic flight, 39th ISGP Meeting & ESA Life Sciences Meeting. 2018.
G. Ramos-Llordén, Beirinckx, Q., den Dekker, A. J., and Sijbers, J., An educational presentation on accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation, 10th Annual Meeting of the ISMRM Benelux Chapter. Antwerp, Belgium, 2018.
W. Keustermans, Huysmans, T., Danckaers, F., Zarowski, A., Schmelzer, B., Sijbers, J., and Dirckx, J. J. J., Investigating the relationship between shape and flow in the human nose using a statistical shape model, 6th European Conference on Computational Mechanics (ECCM 6) - 7th European Conference on Computational Fluid Dynamics (ECFD 7), 11 – 15 June 2018, Glasgow, UK. 2018.PDF icon Download abstract (90.58 KB)
S. Van Aert, Fatermans, J., De Backer, A., van den Bos, K. H. W., O'Leary, C. M., Müller-Caspary, K., Jones, L., Lobato, I., Béché, A., den Dekker, A. J., Bals, S., and Nellist, P. D., Maximising dose efficiency in quantitative STEM to reveal the 3D atomic structure of nanomaterials, IMC19, Sydney, Australia. 2018.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Lobato, I., and Van Aert, S., The maximum a posteriori probability rule to detect single atoms from low signal-to-noise ratio scanning transmission electron microscopy images, IMC19, Sydney, Australia. 2018.
T. Elberfeld, De Beenhouwer, J., den Dekker, A. J., Heinzl, C., and Sijbers, J., Parametric Reconstruction of Advanced Glass Fiber-reinforced Polymer Composites from X-ray Images, 8th Conference on Industrial Computed Tomography. Wels, Austria, 2018.PDF icon Download paper (636.09 KB)
S. Manhaeve, Van Nieuwenhove, V., and Sijbers, J., Performance and memory use trade-off in CPU and GPU implementations of a deformation operator for 4D-CT, 8th Conference on Industrial Computed Tomography. 2018.
A. E. Buikema, den Dekker, A. J., and Sijbers, J., Simultaneous T2/diffusion estimation: do we need a diffusion time dependent diffusion model?, 10th Annual Meeting of the ISMRM Benelux Chapter. Antwerp, Belgium, 2018.
2019
B. G. Booth, Keijsers, N. L. W., Huysmans, T., and Sijbers, J., Advancing Analysis Techniques for Plantar Pressure Videos via Open-Access Contributions, IEEE International Symposium on Biomedical Imaging (ISBI'19) . 2019.PDF icon Download abstract (86 KB)
J. Fatermans, den Dekker, A. J., O'Leary, C. M., Nellist, P. D., and Van Aert, S., Atom column detection from STEM images using the maximum a posteriori probability rule, MC 2019, Berlin, Germany. 2019.
J. Fatermans, den Dekker, A. J., and Van Aert, S., Atom detection from electron microscopy images, RBSM 2019, Louvain-la-Neuve, Belgium. p. 15, 2019.
P. Bladt, van Osch, M. J. P., Achten, E., den Dekker, A. J., and Sijbers, J., Beyond the consensus: is sacrificing part of the PCASL scan time for measurement of labeling efficiency and T1 of blood beneficial?, University of Michigan international workshop on arterial spin labeling MRI: technical updates and clinical experience, March 9-10 2019, Ann Arbor, USA. 2019.PDF icon Download abstract (1.31 MB)
P. Bladt, van Osch, M. J. P., Achten, E., den Dekker, A. J., and Sijbers, J., Beyond the consensus: should measurement of T1 of blood and labeling efficiency be included and should a single- or multi-PLD protocol be used in a five-minute protocol for PCASL?, 11th Annual Meeting of ISMRM Benelux, January 17th 2019, Leiden, The Netherlands. 2019.
P. Bladt, van Osch, M. J. P., Achten, E., den Dekker, A. J., and Sijbers, J., Beyond the consensus: what to include when 5 minutes are available for perfusion imaging by PCASL?, 27th Annual Meeting of ISMRM, Montreal, Canada. 2019.
M. Nicastro and Siqueira Pinto, M., BQ-MINDED: Introducing Quantitative MRI in routine clinical practice, Marie Curie Alumni Association Annual Conference. 2019.PDF icon Download abstract (2.21 MB)
E. Ribeiro Sabidussi, Nicastro, M., Bazrafkan, S., Beirinckx, Q., Jeurissen, B., den Dekker, A. J., Klein, S., and Poot, D. H. J., A deep learning approach to T1 mapping in quantitative MRI, 36th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine & Biology, Rotterdam, The Netherlands, vol. 32 (Suppl. 1). Magn Reson Mater Phy, 2019.
J. Rimpelainen, Bazrafkan, S., Sijbers, J., and De Beenhouwer, J., Deep learning based missing wedge artefact removal for electron tomography, Microscopy Conference, Berlin, Germany. pp. 660-661, 2019.
A. E. Buikema, den Dekker, A. J., and Sijbers, J., Diffusion time dependence in the mid-time regime: a simulation study using PGSE., 27th Annual Meeting of the ISMRM. Montreal, Canada, 2019.
A. E. Buikema, den Dekker, A. J., and Sijbers, J., Effect of diffusion time dependence on parameter estimation in the clinical time frame: a simulation study using PGSE, 11th Annual Meeting of the ISMRM Benelux Chapter. Leiden, the Netherlands, 2019.
B. Auer, Kalluri, K., De Beenhouwer, J., Zeraatkar, N., Könik, A., Kuo, P. H., Furenlid, L. R., and King, M. A., Investigation of keel versus knife edge pinhole profiles for a next-generation SPECT system dedicated to clinical brain imaging, 2nd International Conference on Monte Carlo Techniques for Medical Applications. 2019.
T. Elberfeld, Bazrafkan, S., De Beenhouwer, J., and Sijbers, J., Mixed-Scale Dense Convolutional Neural Network based Improvement of Glass Fiber-reinforced Composite CT Images, 4th International Conference on Tomography of Materials & Structures. 2019.
A. E. Buikema, den Dekker, A. J., and Sijbers, J., Optimal design of a blended diffusion/relaxometry experiment, 36th Annual Scientific Meeting of the ESMRMB. Rotterdam, the Netherlands, 2019.
S. Van Aert, De wael, A., Fatermans, J., Lobato, I., De Backer, A., Jones, L., den Dekker, A. J., and Nellist, P. D., Quantifying 3D atomic structures of nanomaterials and their dynamics using model-based scanning transmission electron microscopy, Spring Meeting of the EMRS, Nice, France. 2019.

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