Publications
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[ Author] Type Year Filters: Term is Visionlab and Type is Journal Article [Clear All Filters]
“Computer Analysis of Two-Dimensional Electrophoresis Gels : A New Segmentation and Modeling Algorithm”, Electrophoresis, vol. 18, pp. 792-798, 1997.
, “The anatomy of the clavicle: A Three-dimensional Cadaveric Study”, Clinical anatomy, vol. 27, no. 5, pp. 712–723, 2014. Download paper (554.93 KB)
, “Joint Maximum Likelihood estimation of motion and T1 parameters from magnetic resonance images in a super-resolution framework: a simulation study”, Fundamenta Informaticae, vol. 172, pp. 105–128, 2020. Download paper (final author version) (2.15 MB)
, “Model-based super-resolution reconstruction with joint motion estimation for improved quantitative MRI parameter mapping”, Computerized Medical Imaging and Graphics, vol. 100, no. 102071, pp. 1-16, 2022. Download paper (15.42 MB) Download supplementary material (1.35 MB)
, “Model-based super-resolution reconstruction for pseudo-continuous Arterial Spin Labeling”, NeuroImage, vol. 286, p. 120506, 2024. Download paper (7.23 MB) Download supplementary material (20.75 MB)
, “To Recurse or not to Recurse A Low Dose CT Study”, Progress in Artificial Intelligence, vol. 10, pp. 65–81, 2021.
, “DART: A practical reconstruction algorithm for discrete tomography”, IEEE Transactions on Image Processing, vol. 20, pp. 2542-2553, 2011. Download paper (2.12 MB)
, “Advanced X-ray tomography: experiment, modeling, and algorithms”, Measurement Science and Technology, vol. 29, no. 8, p. 080101, 2018.
, “3D imaging of nanomaterials by discrete tomography”, Ultramicroscopy, vol. 109, pp. 730-740, 2009.
, “Adaptive thresholding of tomograms by projection distance minimization”, Pattern Recognition, vol. 42, pp. 2297-2305, 2009. Download paper (1.05 MB)
, “Generic iterative subset algorithms for discrete tomography”, Discrete Applied Mathematics, vol. 157, pp. 438-451, 2009. Download paper (1.41 MB)
, “DART: A Robust Algorithm for Fast Reconstruction of 3D Grain Maps”, Journal of Applied Crystallography, vol. 43, pp. 1464-1473, 2010. Download paper (824.99 KB)
, “Dynamic angle selection in binary tomography”, Computer Vision and Image Understanding, vol. 117, no. 5, pp. 306–318, 2013. Download paper (2.71 MB)
, “A Semi-Automatic Algorithm for Grey Level Estimation in Tomography”, Pattern Recognition Letters, vol. 32, pp. 1395-1405, 2011.
, “Optimal Threshold Selection for Tomogram Segmentation by Projection Distance Minimization”, IEEE Transactions on Medical Imaging, vol. 28, pp. 676-686, 2009. Download full paper (2.51 MB)
, “The effect of prolonged Spaceflight on Cerebrospinal Fluid and Perivascular Spaces of Astronauts and Cosmonauts”, PNAS, vol. 119, no. 17, 2022.
, “Quantitative three-dimensional reconstruction of catalyst particles for bamboo-like carbon nanotubes”, Nano Letters, vol. 7, pp. 3669-3674, 2007.
, “On-line determination of the velocity of simultaneously moving organisms by image analysis for the detection of sublethal toxicity”, Water Research, vol. 32, pp. 1027-1034, 1998.
, “Reconstruction using Depth of Interaction Information of Curved and Flat Detector Designs for Quantitative Multi-Pinhole Brain SPECT”, Journal of Nuclear Medicine, vol. 61, p. 103, 2020. snm2020_recon_curved.pdf (103.23 KB)
, “Keel-Edge Height Selection for Improved Multi-Pinhole 123I Brain SPECT Imaging”, Journal of Nuclear Medicine, vol. 61, p. 573, 2020. Download paper (127.73 KB)
, “Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform”, Computers and Electronics in Agriculture, vol. 162, pp. 749-758, 2019. shahrimie_2019.pdf (3.12 MB)
, “Non-Destructive Analysis of Plant Physiological Traits Using Hyperspectral Imaging: A Case Study on Drought Stress”, Computers and Electronics in Agriculture, vol. 195, no. 106806, 2022. 1-s2.0-s0168169922001235-main.pdf (5.53 MB)
, “Close-range hyperspectral image analysis for the early detection of plant stress responses in individual plants in a high-throughput phenotyping platform”, ISPRS Journal of Photogrammetry and Remote Sensing , vol. 138, pp. 121-138, 2018.
, “Non-destructive analysis of plant physiological traits using hyperspectral imaging: A case study on drought stress”, Computers and Electronics in Agriculture, vol. 195, 2022.
, “Altered diffusion tensor imaging measurements in aged transgenic Huntington disease rats.”, Brain structure & function, vol. 218, no. 3, pp. 767-78, 2013. Download paper (645.02 KB)
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