Publications

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2015
B. Goris, De Beenhouwer, J., De Backer, A., Zanaga, D., Batenburg, K. J., Sánchez-Iglesias, A., Liz-Marzán, L. M., Van Aert, S., Bals, S., Sijbers, J., and Van Tendeloo, G., “Measuring Lattice Strain in Three Dimensions through Electron Microscopy”, Nano Letters, vol. 15, no. 10, pp. 6996–7001, 2015.
J. Cant, Palenstijn, W. J., Behiels, G., and Sijbers, J., “Modeling blurring effects due to continuous gantry rotation: application to region of interest tomography”, Medical Physics, vol. 42, no. 5, pp. 2709-2717, 2015.
S. Cools, Ghysels, P., Van Aarle, W., Sijbers, J., and Vanroose, W., “A multi-level preconditioned Krylov method for the efficient solution of algebraic tomographic reconstruction problems”, Journal of Computational and Applied Mathematics, vol. 238, no. 1, pp. 1-16, 2015.
R. Heylen, Scheunders, P., Gader, P., and Rangarajan, A., “Nonlinear unmixing by using different metrics in a linear unmixing chain”, IEEE-JSTARS, Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 2015.
M. Van Dael, Rogge, S., Verboven, P., Saeys, W., Sijbers, J., and Nicolai, B., “Online Tomato Inspection Using X-Ray Radiographies and 3- Dimensional Shape Models”, Chemical Engineering Transactions, vol. 44, pp. 37-42, 2015.
G. Van Eyndhoven, Kurttepeli, M., Van Oers, C. J., Cool, P., Bals, S., Batenburg, K. J., and Sijbers, J., “Pore REconstruction and Segmentation (PORES) method for improved porosity quantification of nanoporous materials”, Ultramicroscopy, vol. 148, pp. 10-19, 2015.
D. Zanaga, Bleichrodt, F., Altantzis, T., Winckelmans, N., Palenstijn, W. J., Sijbers, J., van Nijs, B., van Huis, M. A., van Blaaderen, A., Sánchez-Iglesias, A., Liz-Marzán, L. M., Batenburg, K. J., Bals, S., and Van Tendeloo, G., “Quantitative 3D analysis of huge nanoparticle assemblies”, Nanoscale, vol. 8, no. 1, pp. 292-299, 2015.
N. J. Forde, O'Donoghue, S., Scanlon, C., Emsell, L., Chaddock, C., Leemans, A., Jeurissen, B., Barker, G. J., Cannon, D. M., Murray, R. M., and others, “Structural brain network analysis in families multiply affected with bipolar I disorder”, Psychiatry Research: Neuroimaging, vol. 234, pp. 44–51, 2015.
L. Serbruyns, Leunissen, I., Huysmans, T., Cuypers, K., Meesen, R. L., van Ruitenbeek, P., Sijbers, J., and Swinnen, S. P., “Subcortical volumetric changes across the adult lifespan: subregional thalamic atrophy accounts for age-related sensorimotor performance declines”, Cortex, vol. 65, pp. 128-138, 2015.PDF icon paper (1.35 MB)
2016
J. Soons, Danckaers, F., Keustermans, W., Huysmans, T., Sijbers, J., Casselman, J. W., and Dirckx, J. J. J., “3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT”, Hearing research, vol. 340, pp. 79-88, 2016.
S. Van Aert, De Backer, A., Martinez, G. T., den Dekker, A. J., Van Dyck, D., Bals, S., and Van Tendeloo, G., “Advanced electron crystallography through model-based imaging”, IUCrJ, vol. 3, 2016.
W. Guo, Hung, C. - C., Scheunders, P., Kuo, B. - C., Lan, Y., and Ma, Z., “Advanced techniques for computational and information sciences”, Mathematical Problems in Engineering, vol. 2016, 2016.
D. Zanaga, Altantzis, T., Sanctorum, J., Freitag, B., and Bals, S., “An alternative approach for ζ-factor measurement using pure element nanoparticles”, Ultramicroscopy, vol. 164, pp. 11–16, 2016.
G. Thoonen, Nys, B., Haegen, V. Y., Roy, D. G., and Scheunders, P., “Automatic forensic analysis of automotive paints using optical microscopy”, Forensic Science International, vol. 259, pp. 210-220, 2016.
W. R. Crum, Danckaers, F., Huysmans, T., Cotel, M. - C., Natesan, S., Modo, M. M., Sijbers, J., Williams, S. C. R., Kapur, S., and Vernon, A. C., “Chronic exposure to haloperidol and olanzapine leads to common and divergent shape changes in the rat hippocampus in the absence of grey-matter volume loss”, Psychological Medicine, vol. 46, no. 15, pp. 3081-3093, 2016.
A. Demertzi, Van Ombergen, A., Tomilovskaya, E., Jeurissen, B., Pechenkova, E. V., Di Perri, C., Litvinova, L., Amico, E., Rumshiskaya, A., Rukavishnikov, I., Sijbers, J., Sinitsyn, V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., “Cortical reorganization in an astronaut’s brain after long-duration spaceflight”, Brain Structure and Function, vol. 221, no. 5, pp. 2873–2876, 2016.PDF icon Download paper (820.49 KB)
D. Perrone, Jeurissen, B., Aelterman, J., Roine, T., Sijbers, J., Pizurica, A., Leemans, A., and Philips, W., “D-BRAIN: Anatomically Accurate Simulated Diffusion MRI Brain Data”, PlosOne, vol. 11, pp. 1-23, 2016.PDF icon Download paper (16.22 MB)
J. Veraart, Novikov, D. S., Daan, C., Ades-Aron, B., Sijbers, J., and Fieremans, E., “Denoising of diffusion MRI using random matrix theory”, NeuroImage, vol. 142, pp. 384-396, 2016.PDF icon Download paper (4.53 MB)
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., “Detecting and locating light atoms from high-resolution STEM images: the quest for a single optimal design Ultramicroscopy”, Ultramicroscopy, vol. 170, pp. 128-138, 2016.
C. Guglielmetti, Veraart, J., Roelant, E., Mai, Z., Daans, J., Van Audekerke, J., Naeyaert, M., Vanhoutte, G., Delgado Y Palacios, R., Praet, J., Fieremans, E., Ponsaerts, P., Sijbers, J., Van Der Linden, A., and Verhoye, M., “Diffusion kurtosis imaging probes cortical alterations and white matter pathology following cuprizone-induced demyelination and spontaneous remyelination”, NeuroImage, vol. 125, pp. 363–377, 2016.
W. J. Palenstijn, Bédorf, J., Sijbers, J., and Batenburg, K. J., “A distributed ASTRA Toolbox”, Advanced Structural and Chemical Imaging, vol. 2, no. 19, 2016.PDF icon Download paper (2.7 MB)
F. Bleichrodt, van Leeuwen, T., Palenstijn, W. J., Van Aarle, W., Sijbers, J., and Batenburg, K. J., “Easy implementation of advanced tomography algorithms using the ASTRA toolbox with Spot operators”, Numerical Algorithms, vol. 71, pp. 673-697, 2016.
W. Van Aarle, Palenstijn, W. J., Cant, J., Janssens, E., Bleichrodt, F., Dabravolski, A., De Beenhouwer, J., Batenburg, K. J., and Sijbers, J., “Fast and Flexible X-ray Tomography Using the ASTRA Toolbox”, Optics Express, vol. 24, pp. 25129-25147, 2016.PDF icon Download paper (8.34 MB)
E. Janssens, Alves Pereira, L. F., De Beenhouwer, J., Tsang, I. R., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., “Fast inline inspection by neural network based filtered backprojection: Application to apple inspection”, Case Studies in Nondestructive Testing and Evaluation, vol. 6, pp. 14–20, 2016.PDF icon Download paper (726.63 KB)
Z. H. Nezhad, Karami, A., Heylen, R., and Scheunders, P., “Fusion of Hyperspectral and Multispectral Images Using Spectral Unmixing and Sparse Coding”, IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 9, no. 6, pp. 2377-2389, 2016.

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