Publications

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In Press
A. De Backer, Fatermans, J., den Dekker, A. J., and Van Aert, S., “Chapter Eight - General conclusions and future perspectives”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
A. De Backer, Fatermans, J., den Dekker, A. J., and Van Aert, S., “Chapter Five - Optimal experiment design for nanoparticle atom counting from ADF STEM images”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
A. De Backer, Fatermans, J., den Dekker, A. J., and Van Aert, S., “Chapter Four - Atom counting”, in Advances in Imaging and Electron Physics,, vol. 216, Science Direct Elsevier, In Press.
A. De Backer, Fatermans, J., den Dekker, A. J., and Van Aert, S., “Chapter One - Introduction”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
J. Fatermans, De Backer, A., den Dekker, A. J., and Van Aert, S., “Chapter Seven - Image-quality evaluation and model selection with maximum a posteriori probability”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
J. Fatermans, De Backer, A., den Dekker, A. J., and Van Aert, S., “Chapter Six - Atom column detection”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
A. De Backer, Fatermans, J., den Dekker, A. J., and Van Aert, S., “Chapter Three - Efficient fitting algorithm”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
A. De Backer, Fatermans, J., den Dekker, A. J., and Van Aert, S., “Chapter Two - Statistical parameter estimation theory: principles and simulation studies”, in Advances in Imaging and Electron Physics, vol. 216, Science Direct Elsevier, In Press.
2021
M. Nicastro, Jeurissen, B., Beirinckx, Q., Smekens, C., Poot, D. H. J., Sijbers, J., and den Dekker, A. J., “Comparison of MR acquisition strategies for super-resolution reconstruction using the Bayesian Mean Squared Error”, in International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2021.
C. Smekens, Beirinckx, Q., Vanhevel, F., Van Dyck, P., den Dekker, A. J., Sijbers, J., Janssens, T., and Jeurissen, B., “Super-resolution T2* mapping of the knee using UTE Spiral VIBE MRI”, Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), 29th Annual Meeting, An Online Experience. p. 3920, 2021.
2020
S. Van Aert, De Backer, A., De wael, A., Fatermans, J., Friedrich, T., Lobato, I., O'Leary, C. M., Varambhia, A., Altantzis, T., Jones, L., den Dekker, A. J., Nellist, P. D., and Bals, S., “3D Atomic Scale Quantification of Nanostructures and their Dynamics Using Model-based STEM”, Microscopy & Microanalysis 2020 (online), Milwaukee, United States. 2020.
P. Bladt, “Accurate and precise perfusion parameter estimation in pseudo-continuous arterial spin labeling MRI”, 2020.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Gauquelin, N., Verbeeck, J., and Van Aert, S., “Atom column detection from simultaneously acquired ABF and ADF STEM images”, Ultramicroscopy, vol. 219, p. 113046, 2020.
J. Fatermans, den Dekker, A. J., Gauquelin, N., Verbeeck, J., and Van Aert, S., “Bayesian model selection for atom column detection from ABF-ADF STEM images”, Virtual Early Career EMC 2020 (online), Copenhagen, Denmark. 2020.
P. Bladt, den Dekker, A. J., Clement, P., Achten, E., and Sijbers, J., “The costs and benefits of estimating T1 of tissue alongside cerebral blood flow and arterial transit time in pseudo-continuous arterial spin labeling”, NMR in Biomedicine, vol. 33, no. 12, pp. 1-17, 2020.PDF icon Download paper (16.44 MB)
M. Siqueira Pinto, Paolella, R., Billiet, T., Van Dyck, P., Guns, P. - J., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J., “Harmonisation of Brain Diffusion MRI: Concepts and Methods”, Frontiers in Neuroscience , vol. 14, pp. 1-17, 2020.PDF icon Download paper (2.61 MB)
V. Anania, Billiet, T., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J., “Improved voxel-wise quantification of diffusion and kurtosis metrics in the presence of noise and intensity outliers”, 12th Annual Meeting ISMRM Benelux Chapter, Arnhem, The Netherlands. 2020.
B. Shafieizargar, Jeurissen, B., den Dekker, A. J., and Sijbers, J., “Joint estimation of phase and diffusion tensor parameters from multi-shot k-q-space data: a proof of concept”, ISMRM-Benelux, vol. 12. 2020.
B. Shafieizargar, Jeurissen, B., den Dekker, A. J., and Sijbers, J., “Joint estimation of phase and diffusion tensor parameters from multi-shot k-q-space data: a proof of concept”, International Society for Magnetic Resonance in Medicine (ISMRM), vol. 28. 2020.
Q. Beirinckx, Ramos-Llordén, G., Jeurissen, B., Poot, D. H. J., Parizel, P. M., Verhoye, M., Sijbers, J., and den Dekker, A. J., “Joint Maximum Likelihood estimation of motion and T1 parameters from magnetic resonance images in a super-resolution framework: a simulation study”, Fundamenta Informaticae, vol. 172, pp. 105–128, 2020.
M. Nicastro, Beirinckx, Q., Bladt, P., Jeurissen, B., Klein, S., Sijbers, J., Poot, D. H. J., and den Dekker, A. J., “Optimal design of a T1 super-resolution reconstruction experiment: a simulation study”, 12th Annual Meeting of the ISMRM Benelux Chapter. 2020.PDF icon Download abstract (810.88 KB)
S. Van Aert, De Backer, A., De wael, A., Fatermans, J., E Irmak, A., Friedrich, T., Lobato, I., Jones, L., den Dekker, A. J., Nellist, P. D., and Bals, S., “Strategies for quantifying the 3D atomic structure and the dynamics of nanomaterials using model-based STEM”, Virtual MRS Spring/ Fall Meeting, Boston, United States (online). 2020.
P. Bladt, Beirinckx, Q., van der Plas, M. C. E., Schmid, S., Teeuwisse, W. M., Jeurissen, B., den Dekker, A. J., Sijbers, J., and van Osch, M. J. P., “Super-resolution reconstruction of single-PLD pseudo-continuous ASL images”, Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), 28th Annual Meeting, Virtual conference and exhibition. p. 3293, 2020.
P. Bladt, Beirinckx, Q., Van der Plas, M., Schmid, S., Teeuwisse, W., Jeurissen, B., den Dekker, A. J., Sijbers, J., and van Osch, M., “Super-resolution reconstruction of single-PLD pseudo-continuous ASL images”, Proc Intl Soc Mag Reson Med 28. p. 3293, 2020.
Q. Beirinckx, Bladt, P., van der Plas, M. C. E., Schmid, S., Teeuwisse, W. M., Jeurissen, B., den Dekker, A. J., Sijbers, J., and van Osch, M. J. P., “Super-resolution strategies for single-PLD pseudo-continuous ASL”, 12th Annual Meeting of the ISMRM Benelux Chapter. Arnhem, The Netherlands, 2020.

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