Publications

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Book Chapter
den Dekker, A J., and J. Sijbers, "Advanced Image Processing in Magnetic Resonance Imaging", Series: Signal Processing and Communications, vol. 27: Marcel Dekker, pp. 85-143, October, 2005.
Van Dyck, D., E. Bettens, J. Sijbers, A J. den Dekker, A. van den Bos, M. Op de Beeck, J. Jansen, and H. Zandbergen, "Resolving atoms: what do we have? what do we want?", Institute of Physics Conference Series, vol. 153, no. 3, Cambridge, UK, Institute of Physics Ltd, pp. 95-100, December, 1997.
Conference Abstract
Ramos-Llordén, G., Q. Beirinckx, A J. den Dekker, and J. Sijbers, "Accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation", 26th Annual Meeting of the ISMRM, Paris, France, 2018.
Fatermans, J., A J. den Dekker, C. M. O'Leary, P. D. Nellist, and S. Van Aert, "Atom column detection from STEM images using the maximum a posteriori probability rule", MC 2019, Berlin, Germany, 2019.
Fatermans, J., A J. den Dekker, and S. Van Aert, "Atom detection from electron microscopy images", RBSM 2019, Louvain-la-Neuve, Belgium, 2019.
Fatermans, J., A J. den Dekker, K. Müller-Caspary, I. Lobato, and S. Van Aert, "Bayesian analysis of noisy scanning transmission electron microscopy images for single atom detection", SCANDEM 2018, Technical University of Denmark, Kgs. Lyngby, Denmark, 2018.
Fatermans, J., S. Van Aert, and A J. den Dekker, "Bayesian model-order selection in electron microscopy to detect atomic columns in noisy images", RBSM 2016, Brussels, Belgium, 2016.
Collier, Q., J. Veraart, A J. den Dekker, B. Jeurissen, and J. Sijbers, "CSF partial volume modeling in diffusion kurtosis imaging: a comparative parameter estimation study", Front. Neuroinform. Conference Abstract: Second Belgian Neuroinformatics Congress, 11/2015.
Fatermans, J., K. Müller-Caspary, A J. den Dekker, and S. Van Aert, "Detection of atomic columns from noisy STEM images", MC 2017, Lausanne, Switzerland, 2017.
Ramos-Llordén, G., Q. Beirinckx, A J. den Dekker, and J. Sijbers, "An educational presentation on accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation", 10th Annual Meeting of the ISMRM Benelux Chapter, Antwerp, Belgium, 2018.
Buikema, A. E., A J. den Dekker, and J. Sijbers, "Effect of diffusion time dependence on parameter estimation in the clinical time frame: a simulation study using PGSE", 11th Annual Meeting of the ISMRM Benelux Chapter, Leiden, the Netherlands, 2019.
Van Steenkiste, G., B. Jeurissen, S. Baete, A J. den Dekker, D. H. J. Poot, F. Boada, and J. Sijbers, "High resolution diffusion tensor imaging in a clinically feasible scan time", Front. Neuroinform. Conference Abstract: Second Belgian Neuroinformatics Congress., 2015.
Van Steenkiste, G., B. Jeurissen, S. Baete, A J. den Dekker, D. H. J. Poot, F. Boada, and J. Sijbers, "In vivo high resolution diffusion tensor imaging in a clinically acceptable scan time by combining super resolution reconstruction with simultaneous multi-slice acquisition", ISMRM Benelux Chapter, vol. 8, no. P-036, 2016.
Van Aert, S., J. Fatermans, A. De Backer, K.. H. W. van den Bos, C. M. O'Leary, K. Müller-Caspary, L. Jones, I. Lobato, A. Béché, A J. den Dekker, et al., "Maximising dose efficiency in quantitative STEM to reveal the 3D atomic structure of nanomaterials", IMC19, Sydney, Australia, 2018.
Fatermans, J., A J. den Dekker, K. Müller-Caspary, I. Lobato, and S. Van Aert, "The maximum a posteriori probability rule to detect single atoms from low signal-to-noise ratio scanning transmission electron microscopy images", IMC19, Sydney, Australia, 2018.
Ramos-Llordén, G., A J. den Dekker, M. Björk, M. Verhoye, and J. Sijbers, "NOVIFAST: A fast non-linear least squares method for accurate and precise estimation of T1 from SPGR signals", 24th Annual Meeting of the ISMRM, Singapore, 2016.
Poot, D. H. J., A J. den Dekker, M. Verhoye, I. Blockx, J. Van Audekerke, A. Van Der Linden, and J. Sijbers, "Optimizing the Diffusion Weighting Gradients for Diffusion-Kurtosis Imaging", ISMRM2009 proceedings, vol. 2009, pp. 1394, April, 2009. PDF icon Download full paper (624.88 KB)
Elberfeld, T., J. De Beenhouwer, A J. den Dekker, C. Heinzl, and J. Sijbers, "Parametric Reconstruction of Advanced Glass Fiber-reinforced Polymer Composites from X-ray Images", 8th Conference on Industrial Computed Tomography, Wels, Austria, 2018. PDF icon Download paper (636.09 KB)
Ramos-Llordén, G., H. Segers, W J. Palenstijn, A J. den Dekker, and J. Sijbers, "Partial discreteness: a new type of prior knowledge for MRI reconstruction", 23rd Annual meeting of the ISMRM, Toronto, Canada., vol. 23, pp. 3417, 2015. PDF icon Download abstract (1.14 MB)
Poot, D. H. J., A J. den Dekker, and J. Sijbers, "Pearson Set of Distributions as Improved Signal Model for Diffusion Kurtosis Imaging", ISMRM conference proceedings: ISMRM, pp. 1383, April, 2009. PDF icon Download full paper (638.23 KB)
Van Aert, S., A. De wael, J. Fatermans, I. Lobato, A. De Backer, L. Jones, A J. den Dekker, and P. D. Nellist, "Quantifying 3D atomic structures of nanomaterials and their dynamics using model-based scanning transmission electron microscopy", Spring Meeting of the EMRS, Nice, France, 2019.
Collier, Q., A J. den Dekker, B. Jeurissen, and J. Sijbers, "Robust DKI parameter estimation in case of CSF partial volume effects", ISMRM 24th annual meeting, Singapore, 2016.
Collier, Q., A J. den Dekker, B. Jeurissen, and J. Sijbers, "A robust framework for combined estimation of DKI and CSF partial volume fraction parameters", 8th annual meeting of the ISMRM Benelux chapter, Eindhoven, Netherlands, 2016.
Ramos-Llordén, G., A J. den Dekker, G. Van Steenkiste, J. Van Audekerke, M. Verhoye, and J. Sijbers, "Simultaneous group-wise rigid registration and T1 ML estimation for T1 mapping", 7th meeting of the ISMRM Benelux Chapter, Gent, Belgium, January., 2015.
Ramos-Llordén, G., A J. den Dekker, G. Van Steenkiste, J. Van Audekerke, M. Verhoye, and J. Sijbers, "Simultaneous group-wise rigid registration and T1 ML estimation for T1 mapping", 23rd Annual meeting of the ISMRM, Toronto, Canada., vol. 23, pp. 447, 2015. PDF icon Download abstract (910.6 KB)

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