Publications

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In Press
Bladt, P., A J. den Dekker, P. Clement, E. Achten, and J. Sijbers, "The costs and benefits of estimating T1 of tissue alongside cerebral blood flow and arterial transit time in pseudo-continuous arterial spin labeling", NMR in Biomedicine, In Press.
2020
Beirinckx, Q., G. Ramos-Llordén, B. Jeurissen, D. H. J. Poot, P. M. Parizel, M. Verhoye, J. Sijbers, and A J. den Dekker, "Joint Maximum Likelihood estimation of motion and T1 parameters from magnetic resonance images in a super-resolution framework: a simulation study", Fundamenta Informaticae, vol. 172, pp. 105–128, 2020.
2019
Fatermans, J., A J. den Dekker, C. M. O'Leary, P. D. Nellist, and S. Van Aert, "Atom column detection from STEM images using the maximum a posteriori probability rule", MC 2019, Berlin, Germany, 2019.
Fatermans, J., A J. den Dekker, and S. Van Aert, "Atom detection from electron microscopy images", RBSM 2019, Louvain-la-Neuve, Belgium, pp. 15, 2019.
Bladt, P., M.J.P. van Osch, E. Achten, A J. den Dekker, and J. Sijbers, "Beyond the consensus: is sacrificing part of the PCASL scan time for measurement of labeling efficiency and T1 of blood beneficial?", University of Michigan international workshop on arterial spin labeling MRI: technical updates and clinical experience, March 9-10 2019, Ann Arbor, USA, 2019. PDF icon Download abstract (1.31 MB)
Bladt, P., M.J.P. van Osch, E. Achten, A J. den Dekker, and J. Sijbers, "Beyond the consensus: should measurement of T1 of blood and labeling efficiency be included and should a single- or multi-PLD protocol be used in a five-minute protocol for PCASL?", 11th Annual Meeting of ISMRM Benelux, January 17th 2019, Leiden, The Netherlands, 2019.
Bladt, P., M.J.P. van Osch, E. Achten, A J. den Dekker, and J. Sijbers, "Beyond the consensus: what to include when 5 minutes are available for perfusion imaging by PCASL?", 27th Annual Meeting of ISMRM, Montreal, Canada, 2019.
Presenti, A., J. Sijbers, A J. den Dekker, and J. De Beenhouwer, "CAD-based defect inspection with optimal view angle selection based on polychromatic X-ray projection images", 9th Conference on Industrial Computed Tomography, Padova, Italy, 2019. PDF icon Download paper (219.28 KB)
Sabidussi, E. Ribeiro, M. Nicastro, S. Bazrafkan, Q. Beirinckx, B. Jeurissen, A J. den Dekker, S. Klein, and D. H. J. Poot, "A deep learning approach to T1 mapping in quantitative MRI", 36th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine & Biology, Rotterdam, The Netherlands, vol. 32 (Suppl. 1), no. S09.05: Magn Reson Mater Phy, 2019.
Buikema, A. E., A J. den Dekker, and J. Sijbers, "Diffusion time dependence in the mid-time regime: a simulation study using PGSE.", 27th Annual Meeting of the ISMRM, no. 3572, Montreal, Canada, 2019.
Buikema, A. E., A J. den Dekker, and J. Sijbers, "Effect of diffusion time dependence on parameter estimation in the clinical time frame: a simulation study using PGSE", 11th Annual Meeting of the ISMRM Benelux Chapter, Leiden, the Netherlands, 2019.
Fatermans, J., S. Van Aert, and A J. den Dekker, "The maximum a posteriori probability rule for atom column detection from HAADF STEM images", Ultramicroscopy, vol. 201, pp. 81-91, 2019.
Buikema, A. E., A J. den Dekker, and J. Sijbers, "Optimal design of a blended diffusion/relaxometry experiment", 36th Annual Scientific Meeting of the ESMRMB, Rotterdam, the Netherlands, 2019.
Van Aert, S., A. De wael, J. Fatermans, I. Lobato, A. De Backer, L. Jones, A J. den Dekker, and P. D. Nellist, "Quantifying 3D atomic structures of nanomaterials and their dynamics using model-based scanning transmission electron microscopy", Spring Meeting of the EMRS, Nice, France, 2019.
Van Aert, S., A. De wael, J. Fatermans, I. Lobato, A. De Backer, L. Jones, A J. den Dekker, and P. D. Nellist, "Strategies for quantifying 3D atomic structures of nanomaterials and their dynamics using dose-efficient ADF STEM", PICO2019, Vaalsbroek, The Netherlands, 2019.
Beirinckx, Q., B. Jeurissen, M. Verhoye, A J. den Dekker, and J. Sijbers, "Super-resolution T1 mapping with integrated motion compensation in a joint maximum likelihood framework", 36th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine & Biology (ESMRMB), Rotterdam, The Netherlands, vol. 32 (Suppl. 1), no. S14.05: Magn Reson Mater Phy, 2019.
2018
Bladt, P., A J. den Dekker, P. Clement, E. Achten, and J. Sijbers, "Absolute CBF quantification in multi-time point ASL: the T1 issue", 10th Annual Meeting of ISMRM Benelux, January 26th 2018, Antwerp, Belgium, 2018.
Ramos-Llordén, G., Q. Beirinckx, A J. den Dekker, and J. Sijbers, "Accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation", 26th Annual Meeting of the ISMRM, Paris, France, 2018.
Fatermans, J., A J. den Dekker, K. Müller-Caspary, I. Lobato, and S. Van Aert, "Bayesian analysis of noisy scanning transmission electron microscopy images for single atom detection", SCANDEM 2018, Technical University of Denmark, Kgs. Lyngby, Denmark, pp. 95, 2018.
Collier, Q., J. Veraart, B. Jeurissen, F. Vanhevel, P. Pullens, P. M. Parizel, A J. den Dekker, and J. Sijbers, "Diffusion kurtosis imaging with free water elimination: a Bayesian estimation approach", Magnetic Resonance in Medicine, vol. 80, issue 2, pp. 802-813, 2018. PDF icon Download paper (1.93 MB)
Ramos-Llordén, G., Q. Beirinckx, A J. den Dekker, and J. Sijbers, "An educational presentation on accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation", 10th Annual Meeting of the ISMRM Benelux Chapter, Antwerp, Belgium, 2018.
Ramos-Llordén, G., "Improved MRI Relaxometry through Statistical Signal Processing", Dept. of Physics , vol. Doctor of Science, Antwerp, University of Antwerp, 02/2018. PDF icon Download thesis (19.25 MB)
Van Aert, S., J. Fatermans, A. De Backer, K.. H. W. van den Bos, C. M. O'Leary, K. Müller-Caspary, L. Jones, I. Lobato, A. Béché, A J. den Dekker, et al., "Maximising dose efficiency in quantitative STEM to reveal the 3D atomic structure of nanomaterials", IMC19, Sydney, Australia, 2018.
Fatermans, J., A J. den Dekker, K. Müller-Caspary, I. Lobato, and S. Van Aert, "The maximum a posteriori probability rule to detect single atoms from low signal-to-noise ratio scanning transmission electron microscopy images", IMC19, Sydney, Australia, 2018.
Ramos-Llordén, G., G. Vegas-Sánchez-Ferrero, M. Björk, F. Vanhevel, P. M. Parizel, R. San José Estépar, A J. den Dekker, and J. Sijbers, "NOVIFAST: A fast algorithm for accurate and precise VFA MRI T1 mapping", IEEE Transactions on Medical Imaging, vol. 37, issue 11, pp. 2414 - 2427, 2018. PDF icon Download paper (3.3 MB)

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