Publications

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Journal Article
Collier, Q., J. Veraart, B. Jeurissen, A J. den Dekker, and J. Sijbers, "Iterative Reweighted Linear Least Squares for Accurate, Fast, and Robust Estimation of Diffusion Magnetic Resonance Parameters", Magnetic Resonance in Medicine, vol. 73, issue 6, pp. 2174–2184, 2015.
den Dekker, A J., and J. Sijbers, "Implications of the Rician distribution for fMRI generalized likelihood ratio tests", Magnetic Resonance Imaging, vol. 23, no. 9, pp. 953-959, 2005. PDF icon Download paper (1.36 MB)
den Dekker, A J., J. Sijbers, and D. Van Dyck, "How to optimize the design of a quantitative HREM experiment so as to attain the highest precision", Journal of Microscopy, vol. 194, no. 1, pp. 95-104, 1999. PDF icon Download full paper (601.48 KB)
Sijbers, J., and A J. den Dekker, "Generalized likelihood Ratio tests for complex fMRI data: a simulation study", IEEE Transactions on Medical Imaging, vol. 24, no. 5, pp. 604-611, May, 2005. PDF icon Download paper (377.11 KB)
Van Dyck, D., E. Bettens, J. Sijbers, M. Op de Beeck, A J. den Dekker, and A. van den Bos, "From High Resolution Image to Atomic Structure: how fare are we?", Scanning Microscopy, Special Issue on Image Processing, vol. 11, pp. 467-478, 1997. PDF icon Download full paper (3.45 MB)
den Dekker, A J., J. Gonnissen, A. De Backer, J. Sijbers, and S. Van Aert, "Estimation of unknown structure parameters from high-resolution (S)TEM images: what are the limits?", Ultramicroscopy, vol. 134, pp. 34-43, 2013.
Sijbers, J., A J. den Dekker, J. Van Audekerke, M. Verhoye, and D. Van Dyck, "Estimation of the noise in magnitude MR images", Magnetic Resonance Imaging, vol. 16, no. 1, pp. 87-90, 1998. PDF icon Download paper (64.9 KB)
Collier, Q., J. Veraart, B. Jeurissen, F. Vanhevel, P. Pullens, P. M. Parizel, A J. den Dekker, and J. Sijbers, "Diffusion kurtosis imaging with free water elimination: a Bayesian estimation approach", Magnetic Resonance in Medicine, vol. 80, issue 2, pp. 802-813, 2018. PDF icon Download paper (1.93 MB)
Gonnissen, J., A. De Backer, A J. den Dekker, J. Sijbers, and S. Van Aert, "Detecting and locating light atoms from high-resolution STEM images: the quest for a single optimal design Ultramicroscopy", Ultramicroscopy, vol. 170, pp. 128-138, 2016.
den Dekker, A J., and J. Sijbers, "Data distributions in magnetic resonance images: a review", Physica Medica, vol. 30, issue 7, pp. 725–741, 2014. PDF icon Download paper (410.33 KB)PDF icon Download paper (protected) (505.58 KB)
Bladt, P., A J. den Dekker, P. Clement, E. Achten, and J. Sijbers, "The costs and benefits of estimating T1 of tissue alongside cerebral blood flow and arterial transit time in pseudo-continuous arterial spin labeling", NMR in Biomedicine, In Press.
Sijbers, J., D. H. J. Poot, A J. den Dekker, and W. Pintjens, "Automatic estimation of the noise variance from the histogram of a magnetic resonance image", Physics in Medicine and Biology, vol. 52, no. 5, pp. 1335-1348, February, 2007. PDF icon Download paper (297.18 KB)
Gonnissen, J., A. De Backer, A J. den Dekker, J. Sijbers, and S. Van Aert, "Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question", Ultramicroscopy, vol. 147, pp. 112–120, 2017.
Van Aert, S., A. De Backer, G. T. Martinez, A J. den Dekker, D. Van Dyck, S. Bals, and G. Van Tendeloo, "Advanced electron crystallography through model-based imaging", IUCrJ, vol. 3, no. 1, Jan, 2016.
Sijbers, J., A J. den Dekker, M. Verhoye, A. Van Der Linden, and D. Van Dyck, "Adaptive anisotropic noise filtering for magnitude MR data", Magnetic Resonance Imaging, vol. 17, no. 10, pp. 1533-1539, 1999. PDF icon Download full paper (366 KB)
Conference Paper
Sijbers, J., A J. den Dekker, P. Scheunders, E. Raman, and D. Van Dyck, "Unbiased signal estimation in magnitude MR images", Proceedings of the European Society for Magnetic Resonance in Medicine and Biology, vol. 2, no. 2, Brussels, Belgium, pp. 174, September, 1997.
Bettens, E., A J. den Dekker, J. Sijbers, and D. Van Dyck, "Ultimate resolution in the framework of parameter estimation", IASTED International Conference - Signal and Image Processing (SIP'98), Las Vegas, Nevada, USA, pp. 229-233, October, 1998.
Ramos-Llordén, G., A J. den Dekker, G. Van Steenkiste, J. Van Audekerke, M. Verhoye, and J. Sijbers, "Simultaneous motion correction and T1 estimation in quantitative T1 mapping: An ML restoration approach", 2015 IEEE International Conference on Image Processing (ICIP), pp. 3160-3164, Sept, 2015.
Sijbers, J., A J. den Dekker, D. H. J. Poot, R. Bos, M. Verhoye, N. Van Camp, and A. Van Der Linden, "Robust estimation of the noise variance from background MR data", Proceedings of SPIE Medical Imaging: Image Processing, vol. 6144, San Diego, CA, USA, pp. 2018-2028, February, 2006.
den Dekker, A J., J. Sijbers, and D. Van Dyck, "Quantitative HREM: viewpoints on resolution, precision, and experimental design", Acta Cryst. A55 Supplement, Abstract M11.OE.OO5, IUCR Glasgow, Scotland, August, 1999.
Sijbers, J., and A J. den Dekker, "The performance of generalized likelihood ratio tests for complex functional MRI data in the presence of phase model misspecification", European Society of Magnetic Resonance in Medicine (ESMRMB), Copenhagen, Denmark, pp. 96, September, 2004.
Ramos-Llordén, G., H. Segers, W J. Palenstijn, A J. den Dekker, and J. Sijbers, "Partially discrete magnetic resonance tomography", 2015 IEEE International Conference on Image Processing (ICIP), pp. 1653-1657, Sept, 2015.
den Dekker, A J., J. Sijbers, and D. Van Dyck, "Optimizing the setting of an electron microscope for highest resolution using statistical parameter estimation theory", Workshop: Towards Atomic Resolution Analysis 98, Port Ludlow, WA, U.S.A, September, 1998.
Poot, D. H. J., J. Sijbers, and A J. den Dekker, "Optimizing the Diffusion Kurtosis imaging acquisition", European Society for Magnetic Resonance in Medicine and Biology, Valencia, Spain, October, 2008.
den Dekker, A J., J. Sijbers, and D. Van Dyck, "Optimizing the design of an HREM experiment so as to attain the highest resolution", Proceedings of FEMMS98: Frontiers of Electron Microscopy in Material Science, Kloster Irsee, Germany, April, 1998.

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