Publications

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2016
Q. Collier, den Dekker, A. J., Jeurissen, B., and Sijbers, J., A robust framework for combined estimation of DKI and CSF partial volume fraction parameters, 8th annual meeting of the ISMRM Benelux chapter, Eindhoven, Netherlands. 2016.
M. Van Dael, Lebotsa, S., Herremans, E., Verboven, P., Sijbers, J., Opara, U. L., Cronje, U. L., and Nicolai, B., A segmentation and classification algorithm for online detection of internal disorders in citrus using X-ray radiographs, Postharvest Biology and Technology, vol. 112, pp. 205-214, 2016.
A. De Backer, van den Bos, K. H. W., Van den Broek, W., Sijbers, J., and Van Aert, S., StatSTEM: An efficient approach for accurate and precise model-based quantification of atomic resolution electron microscopy images, Ultramicroscopy, vol. 171, pp. 104–116, 2016.
G. Van Steenkiste, Super-resolution estimation of quantitative MRI parameters, University of Antwerp, 2016.PDF icon Download PhD thesis (7.56 MB)
G. Van Steenkiste, Jeurissen, B., Veraart, J., den Dekker, A. J., Parizel, P. M., Poot, D. H. J., and Sijbers, J., Super-resolution reconstruction of diffusion parameters from diffusion-weighted images with different slice orientations, Magnetic Resonance in Medicine, vol. 75, no. 1, pp. 181-195, 2016.
Z. Wang, Rogge, S., Van Dael, M., Van Nieuwenhove, V., Verboven, P., Sijbers, J., and Nicolai, B., Understanding microstructural deformation of apple tissue from 4D micro-CT imaging, ISHS Symposium 2016: Sensing Plant Water Status - Methods and Applications in Horticultural Science. Potsdam, Germany, 5-7 October. 2016.
W. S. Oliveira, Teixeira, J. V., Tsang, I. R., Cavalcanti, G. D. C., and Sijbers, J., Unsupervised Retinal Vessel Segmentation Using Combined Filters, Plos One, vol. 11, pp. 1-21, 2016.
2015
G. Van Eyndhoven, Batenburg, K. J., Kazantsev, D., Van Nieuwenhove, V., Lee, P. D., Dobson, K. J., and Sijbers, J., A 4D CT reconstruction algorithm for fast liquid flow imaging, Applied Inverse Problems Conference, Helsinki. 2015.
V. Van Nieuwenhove, De Beenhouwer, J., De Schryver, T., Van Hoorebeke, L., and Sijbers, J., Affine deformation correction in cone beam Computed Tomography, in Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, Newport, Rhode Island, USA, 2015, pp. 182-185.
B. Jeurissen, Sijbers, J., and Tournier, J. - D., Assessing inter-subject variability of white matter response functions used for constrained spherical deconvolution, ISMRM 23th Annual Meeting, Toronto, Ontario, Canada, vol. 23. p. 2834, 2015.PDF icon Download abstract (780.16 KB)
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
F. Danckaers, Huysmans, T., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Building a Statistical Shape Model of the Apple from Corresponded Surfaces, Chemical Engineering Transactions, vol. 44, pp. 49-54, 2015.PDF icon Download paper (696.94 KB)
G. Van Steenkiste, Hamaide, J., Jeurissen, B., Poot, D. H. J., Van Audekerke, J., Sijbers, J., and Verhoye, M., Combination of super-resolution reconstruction diffusion tensor imaging and track density imaging reveals song control system connectivity in zebra finches, ISMRM 23th Annual Meeting, Toronto, Ontario, Canada, vol. 23. p. 2861, 2015.PDF icon Download abstract (108.98 KB)
G. Van Steenkiste, Hamaide, J., Jeurissen, B., Poot, D. H. J., Van Audekerke, J., Sijbers, J., and Verhoye, M., Combination of super-resolution reconstruction diffusion tensor imaging and track density imaging reveals song control system connectivity in zebra finches, Proc. Intl. Soc. Mag. Reson. Med. 23. p. 2861, 2015.
Q. Collier, Veraart, J., den Dekker, A. J., Jeurissen, B., and Sijbers, J., CSF partial volume modeling in diffusion kurtosis imaging: a comparative parameter estimation study, Front. Neuroinform. Conference Abstract: Second Belgian Neuroinformatics Congress. 2015.
H. Struyfs, Van Hecke, W., Veraart, J., Sijbers, J., Slaets, S., De Belder, M., Wuyts, L., Peters, B., Sleegers, K., Robberecht, C., Van Broeckhoven, C., De Belder, F., Parizel, P. M., and Engelborghs, S., Diffusion Kurtosis Imaging: a possible MRI biomarker for AD diagnosis?, Journal of Alzheimer’s Disease, vol. 48, pp. 937-948, 2015.PDF icon Download paper (374.95 KB)
C. Guglielmetti, Veraart, J., Roelant, E., Mai, Z., Daans, J., Van Audekerke, J., Praet, J., Ponsaerts, P., Sijbers, J., Van Der Linden, A., and Verhoye, M., Diffusion kurtosis imaging probes cortical alterations and white matter pathology following cuprizone-induced demyelination and spontaneous remyelination, ISMRM 23th Annual Meeting, Toronto, Ontario, Canada, vol. 23. 2015.PDF icon Download abstract (866.27 KB)
V. Van Nieuwenhove, De Beenhouwer, J., De Carlo, F., Mancini, L., Marone, F., and Sijbers, J., Dynamic intensity normalization using eigen flat fields in X-ray imaging, Optics Express, vol. 23, no. 21, pp. 27975-27989, 2015.Package icon Download Matlab code (2.92 MB)PDF icon Download paper (1.68 MB)
F. Danckaers, Huysmans, T., Lacko, D., and Sijbers, J., Evaluation of 3D Body Shape Predictions Based on Features, in 6th International Conference on 3D Body Scanning Technologies, Lugano, Switserland, 2015, pp. 258-265.PDF icon 27danckaers.pdf (2.55 MB)
D. Lacko, Huysmans, T., Parizel, P. M., De Bruyne, G., Verwulgen, S., Van Hulle, M. M., and Sijbers, J., Evaluation of an anthropometric shape model of the human scalp, Applied Ergonomics, vol. 48, pp. 70-85, 2015.PDF icon Paper (3.63 MB)File Shape matrix (cfr section 2.1.1) (36.93 MB)File Measurement matrix (cfr section 2.2.1) (20.05 KB)File Labeled measurements (cfr section 2.2.1) (47.63 KB)
V. Van Nieuwenhove, De Beenhouwer, J., and Sijbers, J., A fast 4D CT reconstruction algorithm for affine deforming objects, Applied inverse problems conference. 2015.
S. Van der Jeught, Sijbers, J., and Dirckx, J. J. J., Fast Fourier-based phase unwrapping on the graphics processing unit in real-time imaging applications, Journal of Imaging, vol. 1, pp. 31-44, 2015.PDF icon Download paper (1.35 MB)
E. Janssens, Pelt, D., De Beenhouwer, J., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Fast Neural Network Based X-Ray Tomography of Fruit on a Conveyor Belt, Chemical Engineering Transactions, vol. 44, pp. 181-186, 2015.
L. Plantagie, Van Aarle, W., Batenburg, K. J., and Sijbers, J., Filtered backprojection using algebraic filters; Application to biomedical micro-CT data, in International Symposium on Biomedical Imaging (ISBI), 2015, pp. 1596-1599.
N. Roberto Vigano, Full-field X-ray orientation imaging using convex optimization and a discrete representation of six-dimensional position - orientation space, 2015.

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