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2010
Rajan, J., D. H. J. Poot, J. Juntu, and J. Sijbers, "Noise measurement from magnitude MRI using local estimates of variance and skewness.", Physics in medicine and biology, vol. 55, issue 16, pp. N441-9, 2010 Aug 21. PDF icon Download paper (219.85 KB)
Veraart, J., W. Van Hecke, I. Blockx, A. Van Der Linden, M. Verhoye, and J. Sijbers, "Non-Rigid coregistration of diffusion kurtosis data", Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on, Rotterdam, the Netherlands, pp. 392-395, April, 2010. PDF icon Download paper (278.35 KB)
Poot, D. H. J., A J. den Dekker, E. Achten, M. Verhoye, and J. Sijbers, "Optimal experimental design for Diffusion Kurtosis Imaging", IEEE Transactions on Medical Imaging, vol. 29, no. 3, pp. 819-829, 2010. PDF icon Download paper (1.12 MB)
Roelandts, T., K. J. Batenburg, E. Biermans, S. Bals, and J. Sijbers, "Partially Discrete Tomography for the Reconstruction of Dense Particles", 17th International Microscopy Congress (IMC17), Rio de Janeiro, Brazil, pp. I7.19, 2010.
Batenburg, K. J., W J. Palenstijn, and J. Sijbers, "Projection and backprojection in tomography: design choices and considerations", Workshop on Applications of Discrete Geometry and Mathematical Morphology, pp. 106-110, 2010. PDF icon Download paper (367.34 KB)
Rajan, J., D. H. J. Poot, J. Juntu, and J. Sijbers, "Segmentation Based Noise Variance Estimation from Background MRI Data", ICIAR , vol. 6111, Porto, Portugal, Springer LNCS, pp. 62-70, 2010.
2009
Batenburg, K. J., S. Bals, J. Sijbers, C. Kubel, P. A. Midgley, J. C. Hernandez, U. Kaiser, E. R. Encina, E. A. Coronado, and G. Van Tendeloo, "3D imaging of nanomaterials by discrete tomography", Ultramicroscopy, vol. 109, pp. 730-740, 2009.
Batenburg, K. J., and J. Sijbers, "Adaptive thresholding of tomograms by projection distance minimization", Pattern Recognition, vol. 42, no. 10, pp. 2297-2305, April, 2009. PDF icon Download paper (1.05 MB)
Poot, D. H. J., "Advances in the reconstruction and statistical processing of Magnetic Resonance images", University of Antwerp, vol. PhD in Sciences: Physics, 2009. PDF icon Download thesis (6.18 MB)
Pinho, R., K. G. Tournoy, R. Gosselin, and J. Sijbers, "Assessment of Tracheal Stenosis Using Active Shape Models of Healthy Tracheas: A Surface Registration Study", Proceedings of 2nd International Workshop on Pulmonary Image Analysis, pp. 125-136, September, 2009.
Van Hecke, W., J. Sijbers, S. De Backer, D. H. J. Poot, P. M. Parizel, and A. Leemans, "On the construction of a ground truth framework for evaluating voxel-based diffusion tensor MRI analysis methods", NeuroImage, vol. 46, no. 3, pp. 692-707, July, 2009. PDF icon Download paper (4.14 MB)
Rajan, J., B. Jeurissen, J. Sijbers, and K. Kannan, "Denoising Magnetic Resonance Images using Fourth Order Complex Diffusion", 13th International Machine Vision and Image Processing Conference, Dublin, Ireland, pp. 123-127, 2009.
Blockx, I., M. Verhoye, G. De Groof, J. Van Audekerke, K. Raber, D. H. J. Poot, J. Sijbers, S. von Horsten, and A. Van Der Linden, "Diffusion Kurtosis Imaging (DKI) reveals an early phenotype (P30) in a transgenic rat model for Huntington’s disease", ISMRM conference proceedings, vol. 2009, pp. 359, April, 2009.
Mai, Z., M. Verhoye, A. Van Der Linden, and J. Sijbers, "Diffusion Tensor Images Upsampling: a Registration-based Approach", 13th International Machine Vision and Image Processing Conference, vol. 13, Dublin, Ireland, pp. 36-40, September, 2009. PDF icon Download paper (808.21 KB)
Van Hecke, W., G. Nagels, G. Emonds, A. Leemans, J. Sijbers, J. van Goethem, and P. M. Parizel, "A diffusion tensor imaging group study of the spinal cord in multiple sclerosis patients with and without T2 spinal cord lesions.", Journal of magnetic resonance imaging : JMRI, vol. 30, issue 1, pp. 25-34, 2009 Jul. PDF icon Download paper (902.67 KB)
Van Camp, N., I. Blockx, M. Verhoye, C. Casteels, F. Coun, A. Leemans, J. Sijbers, V. Baekelandt, K. Van Laere, and A. Van Der Linden, "Diffusion tensor imaging in a rat model of Parkinson's disease after lesioning of the nigrostriatal tract.", NMR in biomedicine, vol. 22, issue 7, pp. 697-706, 2009 Aug.
Delgado Y Palacios, R., M. Verhoye, J. Van Audekerke, D. H. J. Poot, J. Sijbers, O.. Wiborg, and A. Van Der Linden, "DKI visualizes hippocampal alterations in the chronic mild stress ratmodel", ISMRM conference proceedings, vol. 2009, pp. 744, April, 2009.
van der Maar, S., K. J. Batenburg, and J. Sijbers, "Experiences with Cell-BE and GPU for tomography", Embedded COmputer Systems: Architectures, Modeling, and Simulation - 9th International Workshop, SAMOS 2009 - Proceedings: Springer-Verlag Berlin Heidelberg, pp. 298-307, July, 2009.
Leemans, A., B. Jeurissen, J. Sijbers, and D. K. Jones, "ExploreDTI: A Graphical Toolbox for Processing, Analyzing, and Visualizing Diffusion MR Data", ISMRM, 17th Scientific Meeting and Exhibition, Honolulu, USA, April, 2009.
Bernat, A., T. Huysmans, F. Van Glabbeek, J. Sijbers, R. Pinho, and J. L. Gielen, "Exploring the Clavicle: Morphometric Differences Using a 3D Model", AAOS Annual Meeting, Las Vegas,Nevada, February, 2009. PDF icon Full text (12.29 KB)
Jeurissen, B., A. Leemans, J-D. Tournier, and J. Sijbers, "Fiber Tracking on the 'Fiber Cup Phantom' using Constrained Spherical Deconvolution", MICCAI workshop on Diffusion Modelling and the Fiber Cup (DMFC'09), London, United Kingdom, 2009.
Batenburg, K. J., and J. Sijbers, "Generic iterative subset algorithms for discrete tomography", Discrete Applied Mathematics, vol. 157, no. 3, pp. 438-451, 2009. PDF icon Download paper (1.41 MB)
Postnov, A., T. T. De Schutter, J. Sijbers, M. Karperien, and N. De Clerck, "Glucocorticoid-Induced Osteoporosis in Growing Mice Is Not Prevented by Simultaneous Intermittent PTH Treatment", Calcified Tissue International, vol. 85, no. 6, pp. 530-537, December, 2009. PDF icon Download paper (344.96 KB)
Batenburg, K. J., W. Van Aarle, and J. Sijbers, "Grey Level Estimation for Discrete Tomography", Discrete Geometry for Computer Imaging, vol. 5810: Springer, pp. 517-529, September, 2009.
Veraart, J., I. Blockx, W. Van Hecke, M. Verhoye, A. Van Der Linden, and J. Sijbers, "Improved non rigid coregistration of diffusion kurtosis images by incorporating diffusion kurtosis tensor information", Proceedings of the European Society for Magnetic Resonance in Medicine and Biology, Antalya, Turkey, pp. 36, October, 2009.

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