Publications

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Journal Article
F. Bleichrodt, De Beenhouwer, J., Sijbers, J., and Batenburg, K. J., “Aligning Projection Images from Binary Volumes”, Fundamenta Informaticae, vol. 135, pp. 1-22, 2014.
E. Pechenkova, Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., Mershina, E., Sinitsyn, V., Van Ombergen, A., Jeurissen, B., Jillings, S., Laureys, S., Sijbers, J., Grishin, A., Chernikova, L., Naumov, I., Kornilova, L., Wuyts, F. L., Tomilovskaya, E., and Kozlovskaya, I., “Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI.”, Front Physiol, vol. 10, no. 761, pp. 1-23, 2019.
B. T. Antonsen, Jiang, Y., Veraart, J., Qu, H., Nguyen, H. P., Sijbers, J., Von Hörsten, S., Johnson, A. G., and Leergaard, T. B., “Altered diffusion tensor imaging measurements in aged transgenic Huntington disease rats.”, Brain structure & function, vol. 218, no. 3, pp. 767-78, 2013.PDF icon Download paper (645.02 KB)
A. Van Ombergen, Heine, L., Jillings, S., Roberts, E., Jeurissen, B., Van Rompaey, V., Mucci, V., Vanhecke, S., Sijbers, J., Vanhevel, F., Sunaert, S., Bahri, M. Ali, Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., “Altered functional brain connectivity in patients with visually induced dizziness”, NeuroImage: Clinical, vol. 14, pp. 538–545, 2017.
W. Jacquet, Nyssen, E., Sun, Y., De Munter, S., Sijbers, J., and Politis, C., “Alveolar Nerve Unfolding Technique for Synoptic Analysis: Visualization and Quantification of Inferior Alveolar Nerve Tracings in Three-dimensional Cone-Beam Computed Tomography.”, The Journal of craniofacial surgery, vol. 24, no. 4, pp. e374-7, 2013.
B. Fröhler, Elberfeld, T., Möller, T., Hege, H. - C., De Beenhouwer, J., Sijbers, J., Kastner, J., and Heinzl, C., “Analysis and Comparison of Algorithms for the Tomographic Reconstruction of Curved Fibres”, Nondestructive Testing and Evaluation, vol. 35, no. 3, pp. 328-341, 2020.
A. Bernat, Huysmans, T., Van Glabbeek, F., Sijbers, J., Gielen, J., and Van Tongel, A., “The anatomy of the clavicle: A Three-dimensional Cadaveric Study”, Clinical anatomy, vol. 27, no. 5, pp. 712–723, 2014.PDF icon Download paper (554.93 KB)
B. Bosmans, Huysmans, T., Lopes, P., Verhoelst, E., Dezutter, T., de Jaegere, P., Sijbers, J., Vander Sloten, J., and Bosmans, J., “Aortic root sizing for transcatheter aortic valve implantation using a shape model parameterisation”, Medical & Biological Engineering & Computing, vol. 57, no. 10, pp. 2081–2092, 2019.PDF icon Download paper (1.79 MB)
R. Pinho, Tournoy, K. G., and Sijbers, J., “Assessment and Stenting of Tracheal Stenosis using Deformable Shape Models”, Medical Image Analysis, vol. 15, pp. 250-266, 2011.
P. Van Dyck, Zazulia, K., Smekens, C., Heusdens, C. H. W., Janssens, T., and Sijbers, J., “Assessment of Anterior Cruciate Ligament Graft Maturity With Conventional Magnetic Resonance Imaging”, The Orthopaedic Journal of Sports Medicine, vol. 7, no. 6, pp. 1-9, 2019.PDF icon Download paper (202.39 KB)
B. G. Booth, Keijsers, N. L. W., Sijbers, J., and Huysmans, T., “An assessment of the information lost when applying data reduction techniques to dynamic plantar pressure measurements”, Journal of Biomechanics , vol. 87, pp. 161-166, 2019.
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., “The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography”, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., “Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question”, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
B. Jeurissen, Leemans, A., and Sijbers, J., “Automated correction of improperly rotated diffusion gradient orientations in diffusion-weighted MRI”, Medical Image Analysis, vol. 18, pp. 953-962, 2014.
J. Grammens, Van Haver, A., Lumban-Gaol, I., Danckaers, F., Verdonck, P., and Sijbers, J., “Automated landmark annotation for morphometric analysis of distal femur and proximal tibia”, Journal of Imaging, vol. 10, no. 4, 2024.PDF icon Download paper (2.06 MB)
P. Lopes, Van Herck, P., Ooms, J., Van Mieghem, N., Wirix-Speetjens, R., Sijbers, J., Vander Sloten, J., and Bosmans, J., “Automated Mitral Valve Assessment for Transcatheter Mitral Valve Replacement (TMVR) Planning”, Frontiers in Bioengineering and Biotechnology, vol. 16, pp. 1-13, 2022.PDF icon Download paper (2.19 MB)
A. Presenti, Liang, Z., Alves Pereira, L. F., Sijbers, J., and De Beenhouwer, J., “Automatic anomaly detection from X-ray images based on autoencoder”, Nondestructive Testing and Evaluation, vol. 37, no. 5, 2022.
T. Huysmans, Sijbers, J., and Verdonk, B., “Automatic Construction of Correspondences for Tubular Surfaces”, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 636-651, 2010.PDF icon Download paper (3.46 MB)
J. Sijbers, Poot, D. H. J., den Dekker, A. J., and Pintjens, W., “Automatic estimation of the noise variance from the histogram of a magnetic resonance image”, Physics in Medicine and Biology, vol. 52, pp. 1335-1348, 2007.PDF icon Download paper (297.18 KB)
V. Nguyen, Alves Pereira, L. F., Liang, Z., Mielke, F., Van Houtte, J., Sijbers, J., and De Beenhouwer, J., “Automatic landmark detection and mapping for 2D/3D registration with BoneNet”, Frontiers Veterinary Science, 2022.PDF icon Download paper (2.51 MB)
J. Sijbers, Vanrumste, B., Van Hoey, G., Boon, P., Verhoye, M., Van Der Linden, A., and Van Dyck, D., “Automatic localization of EEG electrode markers within 3D MR data”, Magnetic Resonance Imaging, vol. 18, pp. 485-488, 2000.PDF icon Download paper (178.74 KB)
W. Van Aarle, Batenburg, K. J., and Sijbers, J., “Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART)”, IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4608-4621, 2012.PDF icon Download paper (3.91 MB)
Z. Mai, Hanel, R., Batenburg, K. J., Verhoye, M., Scheunders, P., and Sijbers, J., “Bias field reduction by localized Lloyd-Max quantization”, Magnetic Resonance Imaging, vol. 29, no. 4, pp. 536-545, 2011.
Y. - T. Ling, Cools, S., Bogdanowicz, J., Fleischmann, C., De Beenhouwer, J., Sijbers, J., and Vandervorst, W., “A Bottom-Up Volume Reconstruction Method for Atom Probe Tomography”, Microscopy and Microanalysis, vol. 28, no. 4, pp. 1-14, 2022.
A. Doroshin, Jillings, S., Jeurissen, B., Tomilovskaya, E., Pechenkova, E. V., Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., De Laet, C., Schoenmaekers, C., Sijbers, J., Laureys, S. S. L., Petrovichev, V., Van Ombergen, A., Annen, J., Sunaert, S., Parizel, P. M., Sinitsyn, V., Eulenburg, Pzu, Osipowicz, K., and Wuyts, F. L., “Brain Connectometry Changes in Space Travelers After Long-Duration Spaceflight”, Front. Neural Circuits, vol. 16, 2022.

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