Publications

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T. Roine, Jeurissen, B., Leemans, A., Philips, W., and Sijbers, J., “Analysis and modeling of isotropic partial volume effects in diffusion MRI”, Frontiers in Neuroinformatics, vol. 7. 2013.
T. Roine, Pietilä, J., Kaartinen, J., Blanz, P., and Rantala, P., “Development of a Machine Vision System to Monitor a Grinding Mill Prototype”, in 12th European Symposium on Comminution and Classification (ESCC 2009), 2009.
U. Roine, Roine, T., Salmi, J., Nieminen-von Wendt, T., Leppämäki, S., Rintahaka, P., Tani, P., Leemans, A., and Sams, M., “Increased coherence of white matter fiber tract organization in adults with Asperger syndrome: A diffusion tensor imaging study”, Autism Research, vol. 6, no. 6, pp. 642-650, 2013.PDF icon Download paper (1.2 MB)
T. Roine, Jeurissen, B., Philips, W., Leemans, A., and Sijbers, J., “Isotropic non-white matter partial volume effects in constrained spherical deconvolution”, Sixth Annual Meeting of the Benelux ISMRM Chapter. 2014.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Philips, W., Leemans, A., and Sijbers, J., “Informed constrained spherical deconvolution (iCSD)”, Medical Image Analysis, vol. 24, no. 1, pp. 269–281, 2015.PDF icon Download accepted manuscript (987.95 KB)
T. Roine, Jeurissen, B., Philips, W., Leemans, A., and Sijbers, J., “Improving fiber orientation estimation in constrained spherical deconvolution under non-white matter partial volume effects”, Proceedings of the Joint Annual Meeting ISMRM–ESMRMB. p. 4492, 2014.PDF icon 4492.pdf (574.06 KB)
T. Roelandts, Batenburg, K. J., and Sijbers, J., “Localizing DART using the Reconstructed Residual Error”, in 1st International Conference on Tomography of Materials and Structures (ICTMS), Ghent, Belgium, 2013, vol. Book of Abstracts: Talks, pp. 113-116.PDF icon Download full paper (491.53 KB)
T. Roelandts, Batenburg, K. J., den Dekker, A. J., and Sijbers, J., “The reconstructed residual error: A novel segmentation evaluation measure for reconstructed images in tomography”, Computer Vision and Image Understanding, vol. 126, pp. 28-37, 2014.PDF icon Download paper (4.58 MB)
T. Roelandts, Batenburg, K. J., Biermans, E., Kubel, C., Bals, S., and Sijbers, J., “Accurate segmentation of dense nanoparticles by partially discrete electron tomography”, Ultramicroscopy, vol. 114, pp. 96-105, 2012.PDF icon Download paper (1.71 MB)
T. Roelandts, “Local Prior Knowledge in Tomography”, 2013.PDF icon Download PhD thesis (15.6 MB)
T. Roelandts, Batenburg, K. J., Biermans, E., Bals, S., and Sijbers, J., “Partially Discrete Tomography for the Reconstruction of Dense Particles”, 17th International Microscopy Congress (IMC17). Rio de Janeiro, Brazil, p. I7.19, 2010.
T. Roelandts, Batenburg, K. J., and Sijbers, J., “Visualizing the Segmentation Error of a Tomogram using the Residual Projection Error”, in The Second International Conference on Image Formation in X-Ray Computed Tomography (CT Meeting), Salt Lake City, UT, USA, 2012, pp. 293-296.
T. Roelandts, Batenburg, K. J., and Sijbers, J., “PDART: A Partially Discrete Algorithm for the Reconstruction of Dense Particles”, in 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Potsdam, Germany, 2011, pp. 448-451.PDF icon Download full paper (1.74 MB)
E. M. R. Robert, Schmitz, N., Boeren, I., Driessens, T., Herremans, K., De Mey, J., Van de Casteele, E., Beeckman, H., and Koedam, N., “Successive Cambia: A Developmental Oddity or an Adaptive Structure?”, PLoS ONE, vol. 6, no. 1, p. e16558, 2011.
J. Rimpelainen, Bazrafkan, S., Sijbers, J., and De Beenhouwer, J., “Deep learning based missing wedge artefact removal for electron tomography”, Microscopy Conference, Berlin, Germany. pp. 660-661, 2019.
R. Riji, Rajan, J., Sijbers, J., and Nair, M. S., “Iterative bilateral filter for Rician noise reduction in MR images”, Signal, Image and Video Processing , 2014.
H. Rezaei, Karami, A., and Scheunders, P., “Hyperspectral and multispectral image fusion based on spectral matching in the shearlet domain”, in IEEE IGARSS 2018, International Geoscience and Remote Sensing Symposium, Valencia, Spain, July 23-27, 2018.
J. Renders, Sijbers, J., and De Beenhouwer, J., “Adjoint image warping using multivariate splines with application to 4D-CT”, Medical Physics, vol. 48, no. 10, pp. 6362-6374, 2021.PDF icon Download paper (6.28 MB)
J. Renders, Nguyen, A. - T., De Beenhouwer, J., and Sijbers, J., “Motion compensating X-ray micro-CT of diamonds in a processing stage”, 31st International Conference on Diamond and Carbon Materials. 2021.
J. Renders, De Beenhouwer, J., and Sijbers, J., “Mesh-based reconstruction of dynamic foam images using X-ray CT”, in International Conference on 3D Vision (3DV2021), 2021, pp. 1312-1320.
J. Renders, Jeurissen, B., Nguyen, A. - T., De Beenhouwer, J., and Sijbers, J., “ImWIP: open-source image warping toolbox with adjoints and derivatives”, SoftwareX, vol. 24, p. 101524, 2023.PDF icon Download paper (1 MB)
J. Renders, Shafieizargar, B., Verhoye, M., De Beenhouwer, J., den Dekker, A. J., and Sijbers, J., “DELTA-MRI: Direct deformation Estimation from LongiTudinally Acquired k-space data”, in IEEE International Symposium on Biomedical Imaging, 2023.
J. Renders, Sijbers, J., and De Beenhouwer, J., “Adjoint pairs of image warping operators for motion modeling in 4D-CT”, in 6th International Conference on Image Formation in X-Ray Computed Tomography, 2020.PDF icon Download paper (617.11 KB)
P. Reischig, King, A., Nervo, L., Viganó, N., Guilhem, Y., Palenstijn, W. J., Batenburg, K. J., Preuss, M., and Ludwig, W., “Advances in X-ray diffraction contrast tomography: flexibility in the setup geometry and application to multiphase materials”, Journal of Applied Crystallography, vol. 46, no. 2, pp. 297 - 311, 2013.
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., “Constrained spherical deconvolution based tractography and cognition in Alzheimer’s disease”, International Conference on Alzheimer’s Disease. Paris, France, 2011.

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