Publications

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Journal Article
A. J. den Dekker, Sijbers, J., and Van Dyck, D., How to optimize the design of a quantitative HREM experiment so as to attain the highest precision, Journal of Microscopy, vol. 194, pp. 95-104, 1999.PDF icon Download full paper (601.48 KB)
I. Blockx, Verhoye, M., Van Audekerke, J., Bergwerf, I., Kane, J. X., Delgado Y Palacios, R., Veraart, J., Jeurissen, B., Raber, K., Von Hörsten, S., Ponsaerts, P., Sijbers, J., Leergaard, T. B., and Van Der Linden, A., Identification and characterization of Huntington related pathology: an in vivo DKI imaging study, NeuroImage, vol. 63, no. 2, pp. 653-662, 2012.
M. Verhoye, Van Der Linden, A., Van Audekerke, J., Sijbers, J., Eens, M., and Balthazart, J., Imaging birds in a bird cage: in-vivo FSE 3D MRI of bird brain, MAGMA: Magnetic Resonance Materials in Physics, Biology and Medicine, vol. 6, pp. 22-27, 1998.PDF icon Download paper (1.33 MB)
A. J. den Dekker and Sijbers, J., Implications of the Rician distribution for fMRI generalized likelihood ratio tests, Magnetic Resonance Imaging, vol. 23, pp. 953-959, 2005.PDF icon Download paper (1.36 MB)
D. H. J. Poot, Pintjens, W., Verhoye, M., Van Der Linden, A., and Sijbers, J., Improved B0 field map estimation for high field EPI, Magnetic Resonance Imaging, vol. 28, pp. 441-450, 2010.PDF icon Download paper (1.29 MB)
T. Huysmans, Sijbers, J., Vanpoucke, F., and Verdonk, B., Improved Shape Modeling of Tubular Objects Using Cylindrical Parameterization, Lecture Notes in Computer Science, vol. 4091, pp. 84-91, 2006.
P. M. Parizel, Van Rompaey, V., Loock, V. R., Van Hecke, W., Van Goethem, J., Leemans, A., and Sijbers, J., Influence of User-Defined Parameters on Diffusion Tensor Tractography of the Corticospinal Tract, The Neuroradiology Journal, pp. 139-147, 2007.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Philips, W., Leemans, A., and Sijbers, J., Informed constrained spherical deconvolution (iCSD), Medical Image Analysis, vol. 24, no. 1, pp. 269–281, 2015.PDF icon Download accepted manuscript (987.95 KB)
L. F. Alves Pereira, Janssens, E., Cavalcanti, G. D. C., Tsang, I. R., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Inline Discrete Tomography system: application to agricultural product inspection, Computers and Electronics in Agriculture, vol. 138, pp. 117–126, 2017.
T. De Schryver, Dhaene, J., Dierick, M., Boone, M. N., Janssens, E., Sijbers, J., Van Dael, M., Verboven, P., Nicolai, B., and Van Hoorebeke, L., In-line NDT with X-Ray CT combining sample rotation and translation, NDT & E International, vol. 89, pp. 89–98, 2016.
D. Pelt, Gursoy, D., Palenstijn, W. J., Sijbers, J., De Carlo, F., and Batenburg, K. J., Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data, Journal of Synchrotron Radiation, vol. 23, pp. 842-849, 2016.
T. B. A. de Carvalho, Sibaldo, M. A., Tsang, I. J., Cavalcanti, G. D. C., Sijbers, J., and Tsang, I. R., IntensityPatches and RegionPatches for Image Recognition, Applied Soft Computing, vol. 62, pp. 176-186, 2018.
A. Van Ombergen, Wuyts, F. L., Jeurissen, B., Sijbers, J., Vanhevel, F., Jillings, S., Parizel, P. M., Sunaert, S., Van de Heyning, P. H., Dousset, V., Laureys, S. S. L., and Demertzi, A., Intrinsic connectivity reduces in vestibular-related regions after first-time exposure to short-term gravitational alterations, Scientific Reports, vol. 7, no. 3061, 2017.PDF icon Download paper (3.47 MB)
B. Jeurissen, Leemans, A., Tournier, J. - D., Jones, D. K., and Sijbers, J., Investigating the prevalence of complex fiber configurations in white matter tissue with diffusion magnetic resonance imaging., Human Brain Mapping, vol. 34, pp. 2747-66, 2013.
K. Zarei Zefreh, Investigation on the effect of exposure time on scintillator afterglow for ultra-fast tomography acquisition, Journal of Instrumentation, vol. 11, 2016.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Leemans, A., Philips, W., and Sijbers, J., Isotropic non-white matter partial volume effects in constrained spherical deconvolution, Frontiers in Neuroinformatics, vol. 8, pp. 1-9, 2014.PDF icon Download paper (1.79 MB)
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Leemans, A., Philips, W., and Sijbers, J., Isotropic non-white matter partial volume effects in constrained spherical deconvolution, Information-based methods for neuroimaging: analyzing structure, function and dynamics, p. 112, 2015.
R. Riji, Rajan, J., Sijbers, J., and Nair, M. S., Iterative bilateral filter for Rician noise reduction in MR images, Signal, Image and Video Processing , 2014.
G. Van Gompel, Van Slambrouck, K., Defrise, M., Batenburg, K. J., De Mey, J., Sijbers, J., and Nuyts, J., Iterative correction of beam hardening artifacts in CT, Medical Physics, vol. 38, pp. 36-49, 2011.
G. Van Eyndhoven, Batenburg, K. J., Kazantsev, D., Van Nieuwenhove, V., Lee, P. D., Dobson, K. J., and Sijbers, J., An iterative CT reconstruction algorithm for fast fluid flow imaging, IEEE Transactions on Image Processing, vol. 24, no. 11, pp. 4446-4458, 2015.
Q. Collier, Veraart, J., Jeurissen, B., den Dekker, A. J., and Sijbers, J., Iterative Reweighted Linear Least Squares for Accurate, Fast, and Robust Estimation of Diffusion Magnetic Resonance Parameters, Magnetic Resonance in Medicine, vol. 73, no. 6, pp. 2174–2184, 2015.
E. Fransen, Dhooghe, R., Van Camp, G., Verhoye, M., Sijbers, J., Reyniers, E., Soriano, P., Kamiguchi, H., Willemsen, R., Koekoek, K. E., Zeeuw, D. C. I., De Deyn, P. P., Van Der Linden, A., Lemmon, V., Kooy, R. F., and Willems, P. J., L1 knockout mice show dilated ventricles, vermis hypoplasia and impaired exploration patterns, Human Molecular Genetics, vol. 7, pp. 999-1009, 1998.PDF icon Download paper (248.02 KB)
A. J. den Dekker, Poot, D. H. J., Bos, R., and Sijbers, J., Likelihood based hypothesis tests for brain activation detection from MRI data disturbed by colored noise: a simulation study, IEEE Transactions on Medical Imaging, vol. 28, pp. 287-296, 2009.
J. Sijbers, den Dekker, A. J., and Bos, R., A likelihood ratio test for functional MRI data analysis to account for colored noise, Lecture Notes in Computer Science, vol. 3708, pp. 538-546, 2005.PDF icon Download full paper (483.15 KB)
L. Emsell, Leemans, A., Langan, C., Van Hecke, W., Barker, G. J., McCarthy, P., Jeurissen, B., Sijbers, J., Sunaert, S., Cannon, D. M., and McDonald, C., Limbic and callosal white matter changes in euthymic bipolar I disorder: an advanced diffusion MRI tractography study, Biologicial Psychiatry, vol. 73, no. 2, pp. 194-201, 2013.

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