Publications

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Journal Article
B. G. Booth, Keijsers, N. L. W., Sijbers, J., and Huysmans, T., An assessment of the information lost when applying data reduction techniques to dynamic plantar pressure measurements, Journal of Biomechanics , vol. 87, pp. 161-166, 2019.
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
B. Jeurissen, Leemans, A., and Sijbers, J., Automated correction of improperly rotated diffusion gradient orientations in diffusion-weighted MRI, Medical Image Analysis, vol. 18, pp. 953-962, 2014.
P. Lopes, Van Herck, P., Ooms, J., Van Mieghem, N., Wirix-Speetjens, R., Sijbers, J., Vander Sloten, J., and Bosmans, J., Automated Mitral Valve Assessment for Transcatheter Mitral Valve Replacement (TMVR) Planning, Frontiers in Bioengineering and Biotechnology, vol. 16, pp. 1-13, 2022.PDF icon Download paper (2.19 MB)
A. Presenti, Liang, Z., Alves Pereira, L. F., Sijbers, J., and De Beenhouwer, J., Automatic anomaly detection from X-ray images based on autoencoder, Nondestructive Testing and Evaluation, vol. 37, no. 5, 2022.
T. Huysmans, Sijbers, J., and Verdonk, B., Automatic Construction of Correspondences for Tubular Surfaces, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 636-651, 2010.PDF icon Download paper (3.46 MB)
J. Sijbers, Poot, D. H. J., den Dekker, A. J., and Pintjens, W., Automatic estimation of the noise variance from the histogram of a magnetic resonance image, Physics in Medicine and Biology, vol. 52, pp. 1335-1348, 2007.PDF icon Download paper (297.18 KB)
V. Nguyen, Alves Pereira, L. F., Liang, Z., Mielke, F., Van Houtte, J., Sijbers, J., and De Beenhouwer, J., Automatic landmark detection and mapping for 2D/3D registration with BoneNet, Frontiers Veterinary Science, 2022.PDF icon Download paper (2.51 MB)
J. Sijbers, Vanrumste, B., Van Hoey, G., Boon, P., Verhoye, M., Van Der Linden, A., and Van Dyck, D., Automatic localization of EEG electrode markers within 3D MR data, Magnetic Resonance Imaging, vol. 18, pp. 485-488, 2000.PDF icon Download paper (178.74 KB)
W. Van Aarle, Batenburg, K. J., and Sijbers, J., Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART), IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4608-4621, 2012.PDF icon Download paper (3.91 MB)
Z. Mai, Hanel, R., Batenburg, K. J., Verhoye, M., Scheunders, P., and Sijbers, J., Bias field reduction by localized Lloyd-Max quantization, Magnetic Resonance Imaging, vol. 29, no. 4, pp. 536-545, 2011.
Y. - T. Ling, Cools, S., Bogdanowicz, J., Fleischmann, C., De Beenhouwer, J., Sijbers, J., and Vandervorst, W., A Bottom-Up Volume Reconstruction Method for Atom Probe Tomography, Microscopy and Microanalysis, vol. 28, no. 4, pp. 1-14, 2022.
A. Doroshin, Jillings, S., Jeurissen, B., Tomilovskaya, E., Pechenkova, E. V., Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., De Laet, C., Schoenmaekers, C., Sijbers, J., Laureys, S. S. L., Petrovichev, V., Van Ombergen, A., Annen, J., Sunaert, S., Parizel, P. M., Sinitsyn, V., Eulenburg, Pzu, Osipowicz, K., and Wuyts, F. L., Brain Connectometry Changes in Space Travelers After Long-Duration Spaceflight, Front. Neural Circuits, vol. 16, 2022.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rühl, M., Rumshiskaya, A., Nosikova, I., Litvinova, L., Annen, J., Pechenkova, E. V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain Tissue–Volume Changes in Cosmonauts, New England Journal of Medicine, vol. 379, no. 17, pp. 1678 - 1680, 2018.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rumshiskaya, A., Litvinova, L., Nosikova, I., Pechenkova, E. V., Rukavishnikov, I., Manko, O., Danylichev, S., R. Rühl, M., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain ventricular volume changes induced by long-duration spaceflight, Proceedings of the National Academy of Sciences, vol. 116, no. 21, pp. 10531-10536, 2019.
F. Danckaers, Huysmans, T., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Building 3D Statistical Shape Models of Horticultural Products, Food and Bioprocess Technology, vol. 10, no. 11, pp. 2100-2112, 2017.PDF icon Download paper (1.73 MB)
F. Danckaers, Huysmans, T., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Building a Statistical Shape Model of the Apple from Corresponded Surfaces, Chemical Engineering Transactions, vol. 44, pp. 49-54, 2015.PDF icon Download paper (696.94 KB)
P. Paramonov, Francken, N., Renders, J., Iuso, D., Elberfeld, T., De Beenhouwer, J., and Sijbers, J., CAD-ASTRA: A versatile and efficient mesh projector for X-ray tomography with the ASTRA-toolbox, Optics Express, vol. 32, no. 3, pp. 3425-3439, 2024.PDF icon Download paper (11.29 MB)
J. Cant, Snoeckx, A., Behiels, G., Parizel, P. M., and Sijbers, J., Can portable tomosynthesis improve the diagnostic value of bedside chest X-ray in the intensive care unit? A proof of concept study, European Radiology Experimental, vol. 1, no. 20, pp. 1-7, 2017.
W. R. Crum, Danckaers, F., Huysmans, T., Cotel, M. - C., Natesan, S., Modo, M. M., Sijbers, J., Williams, S. C. R., Kapur, S., and Vernon, A. C., Chronic exposure to haloperidol and olanzapine leads to common and divergent shape changes in the rat hippocampus in the absence of grey-matter volume loss, Psychological Medicine, vol. 46, no. 15, pp. 3081-3093, 2016.
Z. Mai, Huysmans, T., and Sijbers, J., Colon Visualization Using Cylindrical Parameterization, Lecture Notes in Computer Science, vol. 4678, pp. 607-615, 2007.PDF icon Full text (1.44 MB)
M. Van Dael, Verboven, P., Zanella, A., Sijbers, J., and Nicolai, B., Combination of shape and X-ray inspection for apple internal quality control: in silico analysis of the methodology based on X-ray computed tomography, Postharvest Biology and Technology, vol. 148, pp. 218-227, 2019.
W. Van Hecke, Leemans, A., De Backer, S., Jeurissen, B., Parizel, P. M., and Sijbers, J., Comparing isotropic and anisotropic smoothing for voxel-based DTI analyses: A simulation study, Human Brain Mapping, vol. 31, pp. 98-114, 2010.
N. Van Camp, Blockx, I., Camon, L., de Vera, N., Verhoye, M., Veraart, J., Van Hecke, W., Martinez, E., Guadelupe, S., Sijbers, J., Planas, A., and Van Der Linden, A., A complementary DTI-histological study in a model of Huntingtons disease, Neurobiology of Aging, vol. 33, pp. 945-959, 2012.

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