Publications

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2012
T. Roelandts, Batenburg, K. J., Biermans, E., Kubel, C., Bals, S., and Sijbers, J., Accurate segmentation of dense nanoparticles by partially discrete electron tomography, Ultramicroscopy, vol. 114, pp. 96-105, 2012.PDF icon Download paper (1.71 MB)
W. Van Aarle, Batenburg, K. J., and Sijbers, J., Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART), IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4608-4621, 2012.PDF icon Download paper (3.91 MB)
G. Van Eyndhoven, Sijbers, J., and Batenburg, K. J., Combined Motion Estimation and Reconstruction in Tomography, in 12th European Conference on Computer Vision, Firenze, Italy, 2012, vol. 7583, pp. 12-21.PDF icon Download paper (478.83 KB)
J. De Beenhouwer, Palenstijn, W. J., Bleichrodt, F., Batenburg, K. J., and Sijbers, J., A framework for markerless alignment with full 3D flexibility, European Microscopy Conference. 2012.PDF icon Download abstract (117.9 KB)
H. Segers, Palenstijn, W. J., Batenburg, K. J., and Sijbers, J., Segmentation of MR Images by k-space distance minimization: a proof of concept, ESMRMB CONGRESS 2012: 29th Annual Scientific Meeting, vol. 25, no. 1. pp. 63-64, 2012.PDF icon Download abstract (221.41 KB)
L. Plantagie, Palenstijn, W. J., Sijbers, J., and Batenburg, K. J., Spatial Variations in Reconstruction Methods for CT, in The Second International Conference on Image Formation in X-Ray Computed Tomography (CT Meeting), 2012, pp. 170-173.
W. Van Aarle, Tomographic segmentation and discrete tomography for quantitative analysis of transmission tomography data, University of Antwerp, Antwerp, Belgium, 2012.PDF icon Download PhD thesis (39.16 MB)
T. Roelandts, Batenburg, K. J., and Sijbers, J., Visualizing the Segmentation Error of a Tomogram using the Residual Projection Error, in The Second International Conference on Image Formation in X-Ray Computed Tomography (CT Meeting), Salt Lake City, UT, USA, 2012, pp. 293-296.
2011
Z. Mai, Hanel, R., Batenburg, K. J., Verhoye, M., Scheunders, P., and Sijbers, J., Bias field reduction by localized Lloyd-Max quantization, Magnetic Resonance Imaging, vol. 29, no. 4, pp. 536-545, 2011.
E. Van de Casteele, Batenburg, K. J., Salmon, P., and Sijbers, J., Bone segmentation using discrete tomography, in Micro-CT User Meeting, 2011, pp. 178-183.PDF icon Download paper (107.53 KB)
K. J. Batenburg and Sijbers, J., DART: A practical reconstruction algorithm for discrete tomography, IEEE Transactions on Image Processing, vol. 20, pp. 2542-2553, 2011.PDF icon Download paper (2.12 MB)
W. Van Aarle, Crombecq, K., Couckuyt, I., Batenburg, K. J., and Sijbers, J., Efficient parameter estimation for discrete tomography using adaptive modeling, in 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2011.PDF icon Download full paper (853.19 KB)
G. Van Gompel, Van Slambrouck, K., Defrise, M., Batenburg, K. J., De Mey, J., Sijbers, J., and Nuyts, J., Iterative correction of beam hardening artifacts in CT, Medical Physics, vol. 38, pp. 36-49, 2011.
W. Van Aarle, Batenburg, K. J., and Sijbers, J., Optimal threshold selection for segmentation of dense homogeneous objects in tomographic reconstructions, IEEE Transactions on Medical Imaging, vol. 30, pp. 980-989, 2011.PDF icon Download paper (1.59 MB)
T. Roelandts, Batenburg, K. J., and Sijbers, J., PDART: A Partially Discrete Algorithm for the Reconstruction of Dense Particles, in 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Potsdam, Germany, 2011, pp. 448-451.PDF icon Download full paper (1.74 MB)
W. J. Palenstijn, Batenburg, K. J., and Sijbers, J., Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs), Journal of structural biology, vol. 176, no. 2, pp. 250-253, 2011.PDF icon Download paper (527.21 KB)
K. J. Batenburg, Van Aarle, W., and Sijbers, J., A Semi-Automatic Algorithm for Grey Level Estimation in Tomography, Pattern Recognition Letters, vol. 32, pp. 1395-1405, 2011.
K. J. Batenburg, Bals, S., Van Aert, S., Roelandts, T., and Sijbers, J., Ultra-High Resolution Electron Tomography for Materials Science: A Roadmap, Microscopy and Microanalysis 2011 Meeting. Nashville, TN, United States, 2011.
2010
W. Van Aarle, Van Gompel, G., Batenburg, K. J., Van de Casteele, E., and Sijbers, J., A 3-dimensional discrete tomography approach for superresolution micro-CT images: application to foams, in The first international conference on image formation in X-ray computed tomography, 2010, pp. 45-48.PDF icon Download full paper (816.87 KB)
K. J. Batenburg, Sijbers, J., Poulsen, H. F., and Knudsen, E., DART: A Robust Algorithm for Fast Reconstruction of 3D Grain Maps, Journal of Applied Crystallography, vol. 43, pp. 1464-1473, 2010.PDF icon Download paper (824.99 KB)
G. Van Gompel, Batenburg, K. J., Van de Casteele, E., Van Aarle, W., and Sijbers, J., A discrete tomography approach for superresolution micro-CT images, in IEEE International Symposium on Biomedical Imaging, Rotterdam, 2010, pp. 816-819.PDF icon Download paper (1.13 MB)
K. Van Slambrouck, Van Gompel, G., Defrise, M., Batenburg, K. J., Sijbers, J., and Nuyts, J., Iterative correction of beam hardening artifacts in CT, in The First International Conference on Image Formation in X-Ray Computed Tomography, 2010.
T. Roelandts, Batenburg, K. J., Biermans, E., Bals, S., and Sijbers, J., Partially Discrete Tomography for the Reconstruction of Dense Particles, 17th International Microscopy Congress (IMC17). Rio de Janeiro, Brazil, p. I7.19, 2010.
K. J. Batenburg, Palenstijn, W. J., and Sijbers, J., Projection and backprojection in tomography: design choices and considerations, in Workshop on Applications of Discrete Geometry and Mathematical Morphology, 2010, pp. 106-110.PDF icon Download paper (367.34 KB)

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