Publications

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2017
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
J. Fatermans, Müller-Caspary, K., den Dekker, A. J., and Van Aert, S., Detection of atomic columns from noisy STEM images, Microscopy Conference 2017 (MC 2017), Lausanne, Switzerland. pp. 445-446, 2017.
P. Bladt, den Dekker, A. J., Clement, P., Achten, E., and Sijbers, J., Maximizing precision in PCASL MRI using an optimized sampling strategy, 34th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine & Biology, Barcelona, Spain. 2017.
P. V. Sudeep, Palanisamy, P., Kesavadas, C., Sijbers, J., den Dekker, A. J., and Rajan, J., A nonlocal maximum likelihood estimation method for enhancing magnetic resonance phase maps, Signal Image and Video Processing, vol. 11, no. 5, pp. 913-920, 2017.
P. Bladt, den Dekker, A. J., Clement, P., Achten, E., and Sijbers, J., Optimal sampling strategy for pseudo-continuous arterial spin labeling MRI, 9th Annual Meeting of ISMRM Benelux, 20th January 2017, Tilburg, The Netherlands. 2017.
G. Ramos-Llordén, den Dekker, A. J., and Sijbers, J., Partial Discreteness: a Novel Prior for Magnetic Resonance Image Reconstruction, IEEE Transactions on Medical Imaging, vol. 36, no. 5, pp. 1041 - 1053, 2017.PDF icon Download paper (3.72 MB)
Q. Collier, Veraart, J., den Dekker, A. J., Vanhevel, F., Parizel, P. M., and Sijbers, J., Solving the Free Water Elimination Estimation Problem by Incorporating T2 Relaxation Properties, International Society of Magnetic Resonance in Medicine. 2017.PDF icon Download poster (996.02 KB)
G. Ramos-Llordén, den Dekker, A. J., Bladt, P., Cuyt, A., and Sijbers, J., Statistically optimal separation of multi-component MR signals with a Majorize-Minimize approach: application to MWF estimation, 34th annual scientific meeting of the ESMRMB. 2017.
P. Bladt, Beirinckx, Q., Van Steenkiste, G., Jeurissen, B., Achten, E., den Dekker, A. J., and Sijbers, J., Super-resolution multi-PLD PCASL: a simulation study, 34th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine & Biology (ESMRMB), Barcelona, Spain, vol. 30 (Suppl. 1). Magn Reson Mater Phy, 2017.
G. Van Steenkiste, Poot, D. H. J., Jeurissen, B., den Dekker, A. J., Vanhevel, F., Parizel, P. M., and Sijbers, J., Super-resolution T1 estimation: quantitative high resolution T1 mapping from a set of low resolution T1 weighted images with different slice orientations, Magnetic Resonance in Medicine, vol. 77, no. 5, pp. 1818–1830, 2017.PDF icon Download paper (3.3 MB)
G. Ramos-Llordén, den Dekker, A. J., Van Steenkiste, G., Jeurissen, B., Vanhevel, F., Van Audekerke, J., Verhoye, M., and Sijbers, J., A unified Maximum Likelihood framework for simultaneous motion and T1 estimation in quantitative MR T1 mapping, IEEE Transactions on Medical Imaging, vol. 36, no. 2, pp. 433 - 446, 2017.
J. Sanctorum, Janssens, E., den Dekker, A. J., Senck, S., Heinzl, C., De Beenhouwer, J., and Sijbers, J., A workflow to reconstruct grating-based X-ray phase contrast CT images: application to CFRP samples, 4th Conference on X-ray and Neutron Phase Imaging with Gratings. Zürich, Switzerland, pp. 139-140, 2017.PDF icon Download poster (1008.67 KB)PDF icon Download abstract (294.87 KB)
2018
P. Bladt, den Dekker, A. J., Clement, P., Achten, E., and Sijbers, J., Absolute CBF quantification in multi-time point ASL: the T1 issue, 10th Annual Meeting of ISMRM Benelux, January 26th 2018, Antwerp, Belgium. 2018.
G. Ramos-Llordén, Beirinckx, Q., den Dekker, A. J., and Sijbers, J., Accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation, 26th Annual Meeting of the ISMRM. Paris, France, 2018.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Lobato, I., and Van Aert, S., Bayesian analysis of noisy scanning transmission electron microscopy images for single atom detection, SCANDEM 2018, Technical University of Denmark, Kgs. Lyngby, Denmark. p. 95, 2018.
Q. Collier, Veraart, J., Jeurissen, B., Vanhevel, F., Pullens, P., Parizel, P. M., den Dekker, A. J., and Sijbers, J., Diffusion kurtosis imaging with free water elimination: a Bayesian estimation approach, Magnetic Resonance in Medicine, vol. 80, no. 2, pp. 802-813, 2018.PDF icon Download paper (1.93 MB)
G. Ramos-Llordén, Beirinckx, Q., den Dekker, A. J., and Sijbers, J., An educational presentation on accurate and precise MRI relaxometry: the often disregarded but critical role of statistical parameter estimation, 10th Annual Meeting of the ISMRM Benelux Chapter. Antwerp, Belgium, 2018.
G. Ramos-Llordén, Improved MRI Relaxometry through Statistical Signal Processing, University of Antwerp, Antwerp, 2018.PDF icon Download thesis (19.25 MB)
S. Van Aert, Fatermans, J., De Backer, A., van den Bos, K. H. W., O'Leary, C. M., Müller-Caspary, K., Jones, L., Lobato, I., Béché, A., den Dekker, A. J., Bals, S., and Nellist, P. D., Maximising dose efficiency in quantitative STEM to reveal the 3D atomic structure of nanomaterials, IMC19, Sydney, Australia. 2018.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Lobato, I., and Van Aert, S., The maximum a posteriori probability rule to detect single atoms from low signal-to-noise ratio scanning transmission electron microscopy images, IMC19, Sydney, Australia. 2018.
G. Ramos-Llordén, Vegas-Sánchez-Ferrero, G., Björk, M., Vanhevel, F., Parizel, P. M., Estépar, R. San José, den Dekker, A. J., and Sijbers, J., NOVIFAST: A fast algorithm for accurate and precise VFA MRI T1 mapping, IEEE Transactions on Medical Imaging, vol. 37, no. 11, pp. 2414 - 2427, 2018.PDF icon Download paper (3.3 MB)
T. Elberfeld, De Beenhouwer, J., den Dekker, A. J., Heinzl, C., and Sijbers, J., Parametric Reconstruction of Advanced Glass Fiber-reinforced Polymer Composites from X-ray Images, 8th Conference on Industrial Computed Tomography. Wels, Austria, 2018.PDF icon Download paper (636.09 KB)
T. Elberfeld, De Beenhouwer, J., den Dekker, A. J., Heinzl, C., and Sijbers, J., Parametric Reconstruction of Glass Fiber-reinforced Polymer Composites from X-ray Projection Data - A Simulation Study, Journal of Nondestructive Evaluation, vol. 37, no. 62, pp. 1573-4862, 2018.
A. E. Buikema, den Dekker, A. J., and Sijbers, J., Simultaneous T2/diffusion estimation: do we need a diffusion time dependent diffusion model?, 10th Annual Meeting of the ISMRM Benelux Chapter. Antwerp, Belgium, 2018.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Lobato, I., O'Leary, C. M., Nellist, P. D., and Van Aert, S., Single Atom Detection from Low Contrast-to-Noise Ratio Electron Microscopy Images, Phys. Rev. Lett., vol. 121, p. 056101, 2018.

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