Publications

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Journal Article
M. Siqueira Pinto, Paolella, R., Billiet, T., Van Dyck, P., Guns, P. - J., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J., Harmonisation of Brain Diffusion MRI: Concepts and Methods, Frontiers in Neuroscience , vol. 14, pp. 1-17, 2020.PDF icon Download paper (2.61 MB)
I. Blockx, Verhoye, M., Van Audekerke, J., Bergwerf, I., Kane, J. X., Delgado Y Palacios, R., Veraart, J., Jeurissen, B., Raber, K., Von Hörsten, S., Ponsaerts, P., Sijbers, J., Leergaard, T. B., and Van Der Linden, A., Identification and characterization of Huntington related pathology: an in vivo DKI imaging study, NeuroImage, vol. 63, no. 2, pp. 653-662, 2012.
V. Anania, Collier, Q., Veraart, J., Buikema, A. Eline, Vanhevel, F., Billiet, T., Jeurissen, B., den Dekker, A. J., and Sijbers, J., Improved diffusion parameter estimation by incorporating T2 relaxation properties into the DKI-FWE model, NeuroImage, vol. 256, p. 119219, 2022.
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., Improved sensitivity to cerebral white matter abnormalities in Alzheimer's disease with spherical deconvolution based tractography., PloS one, vol. 7, no. 8, p. e44074, 2012.
S. B. Vos, Jones, D. K., Jeurissen, B., Viergever, M. A., and Leemans, A., The influence of complex white matter architecture on the mean diffusivity in diffusion tensor MRI of the human brain, NeuroImage, vol. 59, no. 3, pp. 2208 - 2216, 2012.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Philips, W., Leemans, A., and Sijbers, J., Informed constrained spherical deconvolution (iCSD), Medical Image Analysis, vol. 24, no. 1, pp. 269–281, 2015.PDF icon Download accepted manuscript (987.95 KB)
A. Van Ombergen, Wuyts, F. L., Jeurissen, B., Sijbers, J., Vanhevel, F., Jillings, S., Parizel, P. M., Sunaert, S., Van de Heyning, P. H., Dousset, V., Laureys, S. S. L., and Demertzi, A., Intrinsic connectivity reduces in vestibular-related regions after first-time exposure to short-term gravitational alterations, Scientific Reports, vol. 7, no. 3061, 2017.PDF icon Download paper (3.47 MB)
B. Jeurissen, Leemans, A., Tournier, J. - D., Jones, D. K., and Sijbers, J., Investigating the prevalence of complex fiber configurations in white matter tissue with diffusion magnetic resonance imaging., Human Brain Mapping, vol. 34, pp. 2747-66, 2013.
D. Giraldo, Smith, R. E., Struyfs, H., Niemantsverdriet, E., De Roeck, E., Bjerke, M., Engelborghs, S., Romero, E., Sijbers, J., and Jeurissen, B., Investigating tissue-specific abnormalities in Alzheimer’s disease with multi-shell diffusion MRI, Journal of Alzheimer's Disease, In Press.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Leemans, A., Philips, W., and Sijbers, J., Isotropic non-white matter partial volume effects in constrained spherical deconvolution, Information-based methods for neuroimaging: analyzing structure, function and dynamics, p. 112, 2015.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Leemans, A., Philips, W., and Sijbers, J., Isotropic non-white matter partial volume effects in constrained spherical deconvolution, Frontiers in Neuroinformatics, vol. 8, pp. 1-9, 2014.PDF icon Download paper (1.79 MB)
Q. Collier, Veraart, J., Jeurissen, B., den Dekker, A. J., and Sijbers, J., Iterative Reweighted Linear Least Squares for Accurate, Fast, and Robust Estimation of Diffusion Magnetic Resonance Parameters, Magnetic Resonance in Medicine, vol. 73, no. 6, pp. 2174–2184, 2015.
Q. Beirinckx, Ramos-Llordén, G., Jeurissen, B., Poot, D. H. J., Parizel, P. M., Verhoye, M., Sijbers, J., and den Dekker, A. J., Joint Maximum Likelihood estimation of motion and T1 parameters from magnetic resonance images in a super-resolution framework: a simulation study, Fundamenta Informaticae, vol. 172, pp. 105–128, 2020.PDF icon Download paper (final author version) (2.15 MB)
L. Emsell, Leemans, A., Langan, C., Van Hecke, W., Barker, G. J., McCarthy, P., Jeurissen, B., Sijbers, J., Sunaert, S., Cannon, D. M., and McDonald, C., Limbic and callosal white matter changes in euthymic bipolar I disorder: an advanced diffusion MRI tractography study, Biologicial Psychiatry, vol. 73, no. 2, pp. 194-201, 2013.
S. Jillings, Van Ombergen, A., Tomilovskaya, E., Rumshiskaya, A., Litvinova, L., Nosikova, I., Pechenkova, E., Rukavishnikov, I., Kozlovskaya, I. B., Manko, O., Danilichev, S., Sunaert, S., Parizel, P. M., Sinitsyn, V., Petrovichev, V., Laureys, S., Eulenburg, Pzu, Sijbers, J., Wuyts, F. L., and Jeurissen, B., Macro- and microstructural changes in cosmonauts’ brains after long-duration spaceflight, Science Advances, vol. 6, no. 36, p. eaaz9488, 2020.PDF icon Download paper (942.53 KB)
J. Rajan, Jeurissen, B., Verhoye, M., Van Audekerke, J., and Sijbers, J., Maximum likelihood estimation based denoising of magnetic resonance images using restricted local neighborhoods, Physics in Medicine and Biology, vol. 56, pp. 5221-5234, 2011.PDF icon Download full paper (643.93 KB)
Q. Beirinckx, Jeurissen, B., Nicastro, M., Poot, D. H. J., Verhoye, M., den Dekker, A. J., and Sijbers, J., Model-based super-resolution reconstruction with joint motion estimation for improved quantitative MRI parameter mapping, Computerized Medical Imaging and Graphics, vol. 100, no. 102071, pp. 1-16, 2022.PDF icon Download paper (15.42 MB)PDF icon Download supplementary material (1.35 MB)
H. Aerts, Schirner, M., Jeurissen, B., Van Roost, D., Achten, E., Ritter, P., and Marinazzo, D., Modeling brain dynamics in brain tumor patients using The Virtual Brain, eNeuro, 2018.
J. - D. Tournier, Smith, R., Raffelt, D., Tabbara, R., Dhollander, T., Pietsch, M., Christiaens, D., Jeurissen, B., Yeh, C. - H., and Connelly, A., MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation., Neuroimage, p. 116137, 2019.
B. Jeurissen, Tournier, J. - D., Dhollander, T., Connelly, A., and Sijbers, J., Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data, NeuroImage, vol. 103, pp. 411–426, 2014.
J. Kenney, McInerney, S., McPhilemy, G., Najt, P., Scanlon, C., Arndt, S., Scherz, E., Byrne, F., Leemans, A., Jeurissen, B., Donohoe, G., Hallahan, B., McDonald, C., and Cannon, D., P. 3.033 Lateralisation of the arcuate fasciculus in psychosis & the role in verbal learning & auditory verbal hallucinations, European Neuropsychopharmacology, vol. 26, no. 1, pp. S76–S77, 2016.
J. Veraart, Leergaard, T. B., Antonsen, B. T., Van Hecke, W., Blockx, I., Jeurissen, B., Jiang, Y., Van Der Linden, A., Johnson, A. G., Verhoye, M., and Sijbers, J., Population-averaged diffusion tensor imaging atlas of the Sprague Dawley rat brain, NeuroImage, vol. 58, no. 4, pp. 975-983, 2011.
B. Jeurissen, Leemans, A., Jones, D. K., Tournier, J. - D., and Sijbers, J., Probabilistic fiber tracking using the residual bootstrap with constrained spherical deconvolution, Human Brain Mapping, vol. 32, no. 3, pp. 461 - 479, 2011.
P. Fillard, Descoteaux, M., Goh, A., Gouttard, S., Jeurissen, B., Malcolm, J., Ramirez-Manzanares, A., Reisert, M., Sakaie, K., Tensaouti, F., Yo, T. - S., Mangin, J. - F., and Poupon, C., Quantitative Evaluation of 10 Tractography Algorithms on a Realistic Diffusion MR Phantom, NeuroImage, vol. 56, pp. 220-234, 2011.
C. M. W. Tax, Jeurissen, B., Vos, S. B., Viergever, M. A., and Leemans, A., Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data., NeuroImage, vol. 86, pp. 67-80, 2014.

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