Publications

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Journal Article
Goyens, J., M. Vasilopoulou-Kampitsi, R. Claes, J. Sijbers, and L. Mancini, "Enhanced contrast in X-ray microtomographic images of the membranous labyrinth using different X-ray sources and scanning modes", Journal of Anatomy, vol. 233, pp. 770--782, 2018. PDF icon Download paper (1.44 MB)
Van de Casteele, E., D. Van Dyck, J. Sijbers, and E. Raman, "An energy-based beam hardening model in tomography", Physics in Medicine and Biology, vol. 47, no. 23, pp. 4181-4190, 2002. PDF icon Download full paper (203.21 KB)
Van Hecke, W., A. Leemans, C. A. Sage, J. Veraart, J. Sijbers, and S. Sunaert, "The effect of template selection on diffusion tensor voxel based analysis results", NeuroImage, vol. 55, no. 2, pp. 566-573, 2011.
Van Ombergen, A., A. Demertzi, E. Tomilovskaya, B. Jeurissen, J. Sijbers, I. B. Kozlovskaya, P. M. Parizel, P. H. Van de Heyning, S. Sunaert, S. S. L. Laureys, et al., "The effect of spaceflight and microgravity on the human brain", Journal of Neurology, vol. 246, issue 1, pp. 18-22, 2017.
Bleichrodt, F., T. van Leeuwen, W J. Palenstijn, W. Van Aarle, J. Sijbers, and K. J. Batenburg, "Easy implementation of advanced tomography algorithms using the ASTRA toolbox with Spot operators", Numerical Algorithms, vol. 71, no. 3, pp. 673-697, 2016.
Van Nieuwenhove, V., J. De Beenhouwer, F. De Carlo, L. Mancini, F. Marone, and J. Sijbers, "Dynamic intensity normalization using eigen flat fields in X-ray imaging", Optics Express, vol. 23, issue 21, pp. 27975-27989, 2015. Package icon Download Matlab code (2.92 MB)PDF icon Download paper (1.68 MB)
Dabravolski, A., K. J. Batenburg, and J. Sijbers, "Dynamic Angle Selection in X-ray Computed Tomography", Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, vol. 324, pp. 17-24, 2014.
Batenburg, K. J., W J. Palenstijn, P. Balazs, and J. Sijbers, "Dynamic angle selection in binary tomography", Computer Vision and Image Understanding, vol. 117, issue 5, pp. 306–318, 2013. PDF icon Download paper (2.71 MB)
De Bondt, T., W. Van Hecke, J. Veraart, A. Leemans, J. Sijbers, S. Sunaert, Y. Jacquemyn, and P. M. Parizel, "Does the use of hormonal contraceptives cause microstructural changes in cerebral white matter? Preliminary results of a DTI and tractography study.", European radiology, vol. 23, issue 1, pp. 57-64, 2012 Jul 20, 2013. PDF icon Download paper (411.18 KB)
Palenstijn, W J., J. Bédorf, J. Sijbers, and K. J. Batenburg, "A distributed ASTRA Toolbox", Advanced Structural and Chemical Imaging, vol. 2, issue 19, 2016. PDF icon Download paper (2.7 MB)
Smolders, A., D. F. Martino, N. Staeren, P. Scheunders, J. Sijbers, R. Goebel, and E. Formisano, "Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis", Magnetic Resonance Imaging, vol. 25, no. 6, pp. 860-868, July, 2007. PDF icon Download paper (658.36 KB)
Segers, H., W J. Palenstijn, K. J. Batenburg, and J. Sijbers, "Discrete Tomography in MRI: a Simulation Study", Fundamenta Informaticae, vol. 125, issue 3-4, pp. 223-237, 2013.
Van de Casteele, E., E. Perilli, W. Van Aarle, K. Reynolds, and J. Sijbers, "Discrete tomography in an in vivo small animal bone study", Journal of Bone and Mineral Metabolism, vol. 36, issue 1, pp. 40–53, 2018.
Van Dyck, P., M. Froeling, E. De Smet, P. Pullens, M. Torfs, P. Verdonck, J. Sijbers, P. M. Parizel, and B. Jeurissen, "Diffusion Tensor Imaging of the Anterior Cruciate Ligament Graft", Journal of Magnetic Resonance Imaging, vol. 46, issue 5, pp. 1423–1432, 2017.
Van Camp, N., I. Blockx, M. Verhoye, C. Casteels, F. Coun, A. Leemans, J. Sijbers, V. Baekelandt, K. Van Laere, and A. Van Der Linden, "Diffusion tensor imaging in a rat model of Parkinson's disease after lesioning of the nigrostriatal tract.", NMR in biomedicine, vol. 22, issue 7, pp. 697-706, 2009 Aug.
Van Hecke, W., G. Nagels, G. Emonds, A. Leemans, J. Sijbers, J. van Goethem, and P. M. Parizel, "A diffusion tensor imaging group study of the spinal cord in multiple sclerosis patients with and without T2 spinal cord lesions.", Journal of magnetic resonance imaging : JMRI, vol. 30, issue 1, pp. 25-34, 2009 Jul. PDF icon Download paper (902.67 KB)
Mai, Z., M. Verhoye, A. Van Der Linden, and J. Sijbers, "Diffusion tensor image up-sampling: a registration-based approach", Magnetic resonance Imaging, vol. 28, no. 10, pp. 1497-1506, December, 2010. PDF icon Download paper (814.96 KB)
Collier, Q., J. Veraart, B. Jeurissen, F. Vanhevel, P. Pullens, P. M. Parizel, A J. den Dekker, and J. Sijbers, "Diffusion kurtosis imaging with free water elimination: a Bayesian estimation approach", Magnetic Resonance in Medicine, vol. 80, issue 2, pp. 802-813, 2018. PDF icon Download paper (1.93 MB)
Vanhoutte, G., S. Pereson, R. Delgado Y Palacios, P. J. Guns, B. Asselbergh, J. Veraart, J. Sijbers, M. Verhoye, C. Van Broeckhoven, and A. Van Der Linden, "Diffusion kurtosis imaging to detect amyloidosis in an APP/PS1 mouse model for Alzheimer's disease", Magnetic Resonance in Medicine, vol. 69, issue 4, pp. 1115–1121, 2013.
Guglielmetti, C., J. Veraart, E. Roelant, Z. Mai, J. Daans, J. Van Audekerke, M. Naeyaert, G. Vanhoutte, R. Delgado Y Palacios, J. Praet, et al., "Diffusion kurtosis imaging probes cortical alterations and white matter pathology following cuprizone-induced demyelination and spontaneous remyelination", NeuroImage, vol. 125, pp. 363–377, 2016.
Van Cauter, S., J. Veraart, J. Sijbers, R. R. Peeters, U. Himmelreich, V. S. Gool, F. Van Calenbergh, S. De Vleeschouwer, W. Van Hecke, and S. Sunaert, "Diffusion kurtosis imaging in the grading of gliomas", Radiology, vol. 2, no. 263, pp. 492-501, 2012.
Praet, J., N. Manyakov, L. Muchene, Z. Mai, V. Terzopoulos, S. De Backer, A. Torremans, P. J. Guns, T. Van De Casteele, A. Bottelbergs, et al., "Diffusion kurtosis imaging allows the early detection and longitudinal follow-up of amyloid β-induced pathology.", Alzheimer's Research & Therapy , vol. 10, issue 1, pp. 1-16, 2018.
Struyfs, H., W. Van Hecke, J. Veraart, J. Sijbers, S. Slaets, M. De Belder, L. Wuyts, B. Peters, K. Sleegers, C. Robberecht, et al., "Diffusion Kurtosis Imaging: a possible MRI biomarker for AD diagnosis?", Journal of Alzheimer’s Disease, vol. 48, no. 4, pp. 937-948, 2015. PDF icon Download paper (374.95 KB)
Gonnissen, J., A. De Backer, A J. den Dekker, J. Sijbers, and S. Van Aert, "Detecting and locating light atoms from high-resolution STEM images: the quest for a single optimal design Ultramicroscopy", Ultramicroscopy, vol. 170, pp. 128-138, 2016.
Veraart, J., D. S. Novikov, C. Daan, B. Ades-Aron, J. Sijbers, and E. Fieremans, "Denoising of diffusion MRI using random matrix theory", NeuroImage, vol. 142, pp. 384-396, 2016. PDF icon Download paper (4.53 MB)

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