Publications

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Journal Article
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., Detecting and locating light atoms from high-resolution STEM images: the quest for a single optimal design Ultramicroscopy, Ultramicroscopy, vol. 170, pp. 128-138, 2016.
J. Veraart, Novikov, D. S., Daan, C., Ades-Aron, B., Sijbers, J., and Fieremans, E., Denoising of diffusion MRI using random matrix theory, NeuroImage, vol. 142, pp. 384-396, 2016.PDF icon Download paper (4.53 MB)
D. Perrone, Jeurissen, B., Aelterman, J., Roine, T., Sijbers, J., Pizurica, A., Leemans, A., and Philips, W., D-BRAIN: Anatomically Accurate Simulated Diffusion MRI Brain Data, PlosOne, vol. 11, pp. 1-23, 2016.PDF icon Download paper (16.22 MB)
V. Van Nieuwenhove, De Beenhouwer, J., De Schryver, T., Van Hoorebeke, L., and Sijbers, J., Data-Driven Affine Deformation Estimation and Correction in Cone Beam Computed Tomography, IEEE Transactions on Image Processing, vol. 26, no. 3, pp. 1441-1451, 2017.
A. J. den Dekker and Sijbers, J., Data distributions in magnetic resonance images: a review, Physica Medica, vol. 30, no. 7, pp. 725–741, 2014.PDF icon Download paper (410.33 KB)PDF icon Download paper (protected) (505.58 KB)
K. J. Batenburg, Sijbers, J., Poulsen, H. F., and Knudsen, E., DART: A Robust Algorithm for Fast Reconstruction of 3D Grain Maps, Journal of Applied Crystallography, vol. 43, pp. 1464-1473, 2010.PDF icon Download paper (824.99 KB)
K. J. Batenburg and Sijbers, J., DART: A practical reconstruction algorithm for discrete tomography, IEEE Transactions on Image Processing, vol. 20, pp. 2542-2553, 2011.PDF icon Download paper (2.12 MB)
K. Zarei Zefreh, Van Aarle, W., Batenburg, K. J., and Sijbers, J., DART: a new approach for super-resolution reconstruction of license plates, Journal of Electronic Imaging, vol. 22, no. 4, 2013.PDF icon Download paper (2.03 MB)
P. Bladt, den Dekker, A. J., Clement, P., Achten, E., and Sijbers, J., The costs and benefits of estimating T1 of tissue alongside cerebral blood flow and arterial transit time in pseudo-continuous arterial spin labeling, NMR in Biomedicine, In Press.
A. Demertzi, Van Ombergen, A., Tomilovskaya, E., Jeurissen, B., Pechenkova, E. V., Di Perri, C., Litvinova, L., Amico, E., Rumshiskaya, A., Rukavishnikov, I., Sijbers, J., Sinitsyn, V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., Cortical reorganization in an astronaut’s brain after long-duration spaceflight, Brain Structure and Function, vol. 221, no. 5, pp. 2873–2876, 2016.PDF icon Download paper (820.49 KB)
W. Van Hecke, Nagels, G., Leemans, A., Vandervliet, E., Sijbers, J., and Parizel, P. M., Correlation of cognitive dysfunction and diffusion tensor MRI measures in patients with mild and moderate multiple sclerosis, Journal of magnetic resonance imaging, vol. 31, pp. 1492-1498, 2010.
W. Van Hecke, Sijbers, J., D'Agostino, E., Maes, F., De Backer, S., Vandervliet, E., Parizel, P. M., and Leemans, A., On the construction of an inter-subject diffusion tensor magnetic resonance atlas of the healthy human brain, NeuroImage, vol. 43, pp. 69-80, 2008.PDF icon Download paper (3.34 MB)
W. Van Hecke, Sijbers, J., De Backer, S., Poot, D. H. J., Parizel, P. M., and Leemans, A., On the construction of a ground truth framework for evaluating voxel-based diffusion tensor MRI analysis methods, NeuroImage, vol. 46, pp. 692-707, 2009.PDF icon Download paper (4.14 MB)
J. Veraart, Van Hecke, W., and Sijbers, J., Constrained Maximum Likelihood Estimation of the Diffusion Kurtosis Tensor Using a Rician Noise Model, Magnetic Resonance in Medicine, vol. 66, pp. 678-686, 2011.PDF icon Download paper (719.93 KB)
J. Veraart, Rajan, J., Peeters, R. R., Leemans, A., Sunaert, S., and Sijbers, J., Comprehensive framework for accurate diffusion MRI parameter estimation, Magnetic Resonance in Medicine, vol. 81, no. 4, pp. 972-984, 2013.PDF icon ISMRM 2013 poster (476.78 KB)
N. Van Camp, Blockx, I., Camon, L., de Vera, N., Verhoye, M., Veraart, J., Van Hecke, W., Martinez, E., Guadelupe, S., Sijbers, J., Planas, A., and Van Der Linden, A., A complementary DTI-histological study in a model of Huntingtons disease, Neurobiology of Aging, vol. 33, pp. 945-959, 2012.
W. Van Hecke, Leemans, A., De Backer, S., Jeurissen, B., Parizel, P. M., and Sijbers, J., Comparing isotropic and anisotropic smoothing for voxel-based DTI analyses: A simulation study, Human Brain Mapping, vol. 31, pp. 98-114, 2010.
M. Van Dael, Verboven, P., Zanella, A., Sijbers, J., and Nicolai, B., Combination of shape and X-ray inspection for apple internal quality control: in silico analysis of the methodology based on X-ray computed tomography, Postharvest Biology and Technology, vol. 148, pp. 218-227, 2019.
Z. Mai, Huysmans, T., and Sijbers, J., Colon Visualization Using Cylindrical Parameterization, Lecture Notes in Computer Science, vol. 4678, pp. 607-615, 2007.PDF icon Full text (1.44 MB)
W. R. Crum, Danckaers, F., Huysmans, T., Cotel, M. - C., Natesan, S., Modo, M. M., Sijbers, J., Williams, S. C. R., Kapur, S., and Vernon, A. C., Chronic exposure to haloperidol and olanzapine leads to common and divergent shape changes in the rat hippocampus in the absence of grey-matter volume loss, Psychological Medicine, vol. 46, no. 15, pp. 3081-3093, 2016.
J. Cant, Snoeckx, A., Behiels, G., Parizel, P. M., and Sijbers, J., Can portable tomosynthesis improve the diagnostic value of bedside chest X-ray in the intensive care unit? A proof of concept study, European Radiology Experimental, vol. 1, no. 20, pp. 1-7, 2017.
F. Danckaers, Huysmans, T., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Building a Statistical Shape Model of the Apple from Corresponded Surfaces, Chemical Engineering Transactions, vol. 44, pp. 49-54, 2015.PDF icon Download paper (696.94 KB)
F. Danckaers, Huysmans, T., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Building 3D Statistical Shape Models of Horticultural Products, Food and Bioprocess Technology, vol. 10, no. 11, pp. 2100-2112, 2017.PDF icon Download paper (1.73 MB)
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rumshiskaya, A., Litvinova, L., Nosikova, I., Pechenkova, E. V., Rukavishnikov, I., Manko, O., Danylichev, S., R. Rühl, M., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain ventricular volume changes induced by long-duration spaceflight, Proceedings of the National Academy of Sciences, vol. 116, no. 21, pp. 10531-10536, 2019.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rühl, M., Rumshiskaya, A., Nosikova, I., Litvinova, L., Annen, J., Pechenkova, E. V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain Tissue–Volume Changes in Cosmonauts, New England Journal of Medicine, vol. 379, no. 17, pp. 1678 - 1680, 2018.

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