Publications

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Journal Article
Van Aarle, W., K. J. Batenburg, and J. Sijbers, "Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART)", IEEE Transactions on Image Processing, vol. 21, issue 11, pp. 4608-4621, 2012. PDF icon Download paper (3.91 MB)
Sijbers, J., B. Vanrumste, G. Van Hoey, P. Boon, M. Verhoye, A. Van Der Linden, and D. Van Dyck, "Automatic localization of EEG electrode markers within 3D MR data", Magnetic Resonance Imaging, vol. 18, no. 4, pp. 485-488, 2000. PDF icon Download full paper (185.08 KB)
Sijbers, J., D. H. J. Poot, A J. den Dekker, and W. Pintjens, "Automatic estimation of the noise variance from the histogram of a magnetic resonance image", Physics in Medicine and Biology, vol. 52, no. 5, pp. 1335-1348, February, 2007. PDF icon Download paper (297.18 KB)
Huysmans, T., J. Sijbers, and B. Verdonk, "Automatic Construction of Correspondences for Tubular Surfaces", IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, no. 4, pp. 636-651, 2010. PDF icon Download paper (3.46 MB)
Jeurissen, B., A. Leemans, and J. Sijbers, "Automated correction of improperly rotated diffusion gradient orientations in diffusion-weighted MRI", Medical Image Analysis, vol. 18, no. 7, pp. 953-962, 2014.
Gonnissen, J., A. De Backer, A J. den Dekker, J. Sijbers, and S. Van Aert, "Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question", Ultramicroscopy, vol. 147, pp. 112–120, 2017.
Van Aarle, W., W J. Palenstijn, J. De Beenhouwer, T. Altantzis, S. Bals, K. J. Batenburg, and J. Sijbers, "The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography", Ultramicroscopy, vol. 157, pp. 35–47, 2015. PDF icon Download paper (3.47 MB)
Booth, B. G., N. L. W. Keijsers, J. Sijbers, and T. Huysmans, "An assessment of the information lost when applying data reduction techniques to dynamic plantar pressure measurements", Journal of Biomechanics , vol. 87, pp. 161-166, 2019.
Van Dyck, P., K. Zazulia, C. Smekens, C. H. W. Heusdens, T. Janssens, and J. Sijbers, "Assessment of Anterior Cruciate Ligament Graft Maturity With Conventional Magnetic Resonance Imaging", The Orthopaedic Journal of Sports Medicine, vol. 7, issue 6, pp. 1-9, 2019. PDF icon Download paper (202.39 KB)
Pinho, R., K. G. Tournoy, and J. Sijbers, "Assessment and Stenting of Tracheal Stenosis using Deformable Shape Models", Medical Image Analysis, vol. 15, no. 2, pp. 250-266, 2011.
Bosmans, B., T. Huysmans, P. Lopes, E. Verhoelst, T. Dezutter, P. de Jaegere, J. Sijbers, J. Vander Sloten, and J. Bosmans, "Aortic root sizing for transcatheter aortic valve implantation using a shape model parameterisation", Medical & Biological Engineering & Computing, vol. 57, issue 10, pp. 2081–2092, Jul, 2019. PDF icon Download paper (1.8 MB)
Bernat, A., T. Huysmans, F. Van Glabbeek, J. Sijbers, J. Gielen, and A. Van Tongel, "The anatomy of the clavicle: A Three-dimensional Cadaveric Study", Clinical anatomy, vol. 27, issue 5, pp. 712–723, 2013 Oct 21, 2014. PDF icon Download paper (554.93 KB)
Jacquet, W., E. Nyssen, Y. Sun, S. De Munter, J. Sijbers, and C. Politis, "Alveolar Nerve Unfolding Technique for Synoptic Analysis: Visualization and Quantification of Inferior Alveolar Nerve Tracings in Three-dimensional Cone-Beam Computed Tomography.", The Journal of craniofacial surgery, vol. 24, issue 4, pp. e374-7, 2013 Jul.
Van Ombergen, A., L. Heine, S. Jillings, E. Roberts, B. Jeurissen, V. Van Rompaey, V. Mucci, S. Vanhecke, J. Sijbers, F. Vanhevel, et al., "Altered functional brain connectivity in patients with visually induced dizziness", NeuroImage: Clinical, vol. 14, pp. 538–545, 2017.
Antonsen, B. T., Y. Jiang, J. Veraart, H. Qu, H P. Nguyen, J. Sijbers, S. Von Hörsten, A. G. Johnson, and T. B. Leergaard, "Altered diffusion tensor imaging measurements in aged transgenic Huntington disease rats.", Brain structure & function, vol. 218, issue 3, pp. 767-78, 2013 May. PDF icon Download paper (645.02 KB)
Pechenkova, E., I. Nosikova, A. Rumshiskaya, L. Litvinova, I. Rukavishnikov, E. Mershina, V. Sinitsyn, A. Van Ombergen, B. Jeurissen, S. Jillings, et al., "Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI.", Front Physiol, vol. 10, pp. 761, 2019.
Bleichrodt, F., J. De Beenhouwer, J. Sijbers, and K. J. Batenburg, "Aligning Projection Images from Binary Volumes", Fundamenta Informaticae, vol. 135, pp. 1-22, 2014.
Leemans, A., J. Sijbers, S. De Backer, E. Vandervliet, and P. M. Parizel, "Affine Coregistration of Diffusion Tensor Magnetic Resonance Images Using Mutual Information", Lecture Notes in Computer Science, vol. 3708, pp. 523-530, 2005. PDF icon Download full paper (1.26 MB)
Batenburg, K. J., F. De Carlo, L. Mancini, and J. Sijbers, "Advanced X-ray tomography: experiment, modeling, and algorithms", Measurement Science and Technology, vol. 29, issue 8, pp. 080101, 2018.
Dabravolski, A., K. J. Batenburg, and J. Sijbers, "Adaptive zooming in X-ray computed tomography", Journal of X-Ray Science and Technology, vol. 22, no. 1, pp. 77-89, 2014. PDF icon Download paper (3.77 MB)
Batenburg, K. J., and J. Sijbers, "Adaptive thresholding of tomograms by projection distance minimization", Pattern Recognition, vol. 42, no. 10, pp. 2297-2305, April, 2009. PDF icon Download paper (1.05 MB)
Sijbers, J., A J. den Dekker, M. Verhoye, A. Van Der Linden, and D. Van Dyck, "Adaptive anisotropic noise filtering for magnitude MR data", Magnetic Resonance Imaging, vol. 17, no. 10, pp. 1533-1539, 1999. PDF icon Download full paper (366 KB)
Roelandts, T., K. J. Batenburg, E. Biermans, C. Kubel, S. Bals, and J. Sijbers, "Accurate segmentation of dense nanoparticles by partially discrete electron tomography", Ultramicroscopy, vol. 114, pp. 96-105, 2012. PDF icon Download paper (1.71 MB)
Soons, J., F. Danckaers, W. Keustermans, T. Huysmans, J. Sijbers, J. W. Casselman, and J. J. J. Dirckx, "3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT", Hearing research, vol. 340, pp. 79-88, 2016.
Batenburg, K. J., S. Bals, J. Sijbers, C. Kubel, P. A. Midgley, J. C. Hernandez, U. Kaiser, E. R. Encina, E. A. Coronado, and G. Van Tendeloo, "3D imaging of nanomaterials by discrete tomography", Ultramicroscopy, vol. 109, pp. 730-740, 2009.

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