Publications
“Practical multi-mesh registration for few-view poly-chromatic X-ray inspection”, Journal of Non-destructive Testing, In Press.
, “CAD-ASTRA: A versatile and efficient mesh projector for X-ray tomography with the ASTRA-toolbox”, Optics Express, vol. 32, no. 3, pp. 3425-3439, 2024. Download paper (11.29 MB)
, “MIRT: a simultaneous reconstruction and affine motion compensation technique for four dimensional computed tomography (4DCT)”. arXiv.org e-Print archive, 2024. siam_mirt.pdf (2.85 MB)
, “Towards material and process agnostic features for the classification of pore types in metal additive manufacturing”, Materials & Design, vol. 227, p. 111757, 2023.
, “3D total variation denoising in X-CT imaging applied to pore extraction in additively manufactured parts”, Measurement Science and Technology, vol. 33, no. 4, pp. 1-12, 2022.
, “Analysis of Plant Stress Response Using Hyperspectral Imaging and Kernel Ridge Regression”, in 11th International Conference on Robotics, Vision, Signal Processing and Power Applications, Singapore, 2022, vol. 829.
, “Evaluation of a Morphable Anthropomorphic Articulated Total Body Model”, in Design Tools and Methods in Industrial Engineering II - Proceedings of the 2nd International Conference on Design Tools and Methods in Industrial Engineering, ADM 2021, 2022, pp. 761–772.
, “Evaluation of deeply supervised neural networks for 3D pore segmentation in additive manufacturing”, in SPIE Optical Engineering: Developments in X-Ray Tomography XIV , 2022, vol. 12242, p. 122421K. Download paper (protected) (1.79 MB)
, “Non-destructive analysis of plant physiological traits using hyperspectral imaging: A case study on drought stress”, Computers and Electronics in Agriculture, vol. 195, 2022.
, “Non-Destructive Analysis of Plant Physiological Traits Using Hyperspectral Imaging: A Case Study on Drought Stress”, Computers and Electronics in Agriculture, vol. 195, no. 106806, 2022. 1-s2.0-s0168169922001235-main.pdf (5.53 MB)
, “Self-calibration of C-arm imaging system using interventional instruments during an intracranial biplane angiography.”, Int J Comput Assist Radiol Surg, 2022.
, “CAD-based scatter compensation for polychromatic reconstruction of additive manufactured parts”, in IEEE ICIP, 2021, pp. 2948-2952.
, “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
, “Monte-Carlo-Based Estimation of the X-ray Energy Spectrum for CT Artifact Reduction”, Applied Sciences, vol. 11, no. 7, 2021. Download paper (4.96 MB)
, “Strategies for quantifying the 3D atomic structure and the dynamics of nanomaterials using model-based STEM”, Virtual MRS Spring/ Fall Meeting, Boston, United States (online). 2020.
, “Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform”, Computers and Electronics in Agriculture, vol. 162, pp. 749-758, 2019. shahrimie_2019.pdf (3.12 MB)
, “Close-range hyperspectral image analysis for the early detection of plant stress responses in individual plants in a high-throughput phenotyping platform”, ISPRS Journal of Photogrammetry and Remote Sensing , vol. 138, pp. 121-138, 2018.
, “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
, “Stress detection in orchards with hyperspectral remote sensing data”, in SPIE Remote Sensing, Stockholm, Sweden, september 11-14, 2006, vol. 6359.
,