Publications

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In Press
S. Jillings, Pechenkova, E. V., Tomilovskaya, E., Rukavishnikov, I., Jeurissen, B., Van Ombergen, A., Nosikova, I., Rumshiskaya, A., Litvinova, L., Annen, J., De Laet, C., Schoenmaekers, C., Sijbers, J., Petrovichev, V., Sunaert, S., Parizel, P. M., Sinitsyn, V., P Eulenburg, zu, Laureys, S. S. L., Demertzi, A., and Wuyts, F. L., “Prolonged microgravity induces reversible and persistent changes on human cerebral connectivity”, Communications Biology, In Press.
2023
A. - T. Nguyen, Renders, J., Sijbers, J., and De Beenhouwer, J., “Region-based motion-compensated iterative reconstruction technique for dynamic computed tomography”, in IEEE International Symposium on Biomedical Imaging (ISBI), Cartagena de Indias, Colombia, 2023.PDF icon Download paper (461.16 KB)
2022
A. - T. Nguyen, Renders, J., Soete, J., Wevers, M., Sijbers, J., and De Beenhouwer, J., “An accelerated motion-compensated iterative reconstruction technique for dynamic computed tomography”, in Proc. SPIE 12242, Developments in X-Ray Tomography XIV, 122421F, San Diego, CA, United States, 2022.
V. Nguyen, “Advances in biplanar X-ray imaging: calibration and 2D/3D registration”, 2022.PDF icon Download PhD thesis (8.02 MB)
A. - T. Nguyen, Renders, J., Soete, J., Wevers, M., Sijbers, J., and De Beenhouwer, J., “Analytic derivatives of scaling motion-compensated projection operators for dynamic computed tomography”, in e-Journal of Nondestructive Testing, 2022, vol. 27 (3), pp. 1-5.PDF icon ict2022.pdf (632.42 KB)
V. Nguyen, Alves Pereira, L. F., Liang, Z., Mielke, F., Van Houtte, J., Sijbers, J., and De Beenhouwer, J., “Automatic landmark detection and mapping for 2D/3D registration with BoneNet”, Frontiers Veterinary Science, 2022.PDF icon Download paper (2.51 MB)
A. Doroshin, Jillings, S., Jeurissen, B., Tomilovskaya, E., Pechenkova, E. V., Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., De Laet, C., Schoenmaekers, C., Sijbers, J., Laureys, S. S. L., Petrovichev, V., Van Ombergen, A., Annen, J., Sunaert, S., Parizel, P. M., Sinitsyn, V., Eulenburg, Pzu, Osipowicz, K., and Wuyts, F. L., “Brain Connectometry Changes in Space Travelers After Long-Duration Spaceflight”, Front. Neural Circuits, 2022.
G. Barisano, Sepehrband, F., Collins, H. R., Jillings, S., Jeurissen, B., Taylor, A. J., Schoenmaekers, C., De Laet, C., Rukavishnikov, I., Nosikova, I., Rumshiskaya, A., Annen, J., Sijbers, J., Laureys, S. S. L., Van Ombergen, A., Petrovichev, V., Sinitsyn, V., Pechenkova, E. V., Grishin, A., Eulenburg, Pzu, Law, M., Sunaert, S., Parizel, P. M., Tomilovskaya, E., Roberts, D., and Wuyts, F. L., “The effect of prolonged Spaceflight on Cerebrospinal Fluid and Perivascular Spaces of Astronauts and Cosmonauts”, PNAS, vol. 119, no. 17, 2022.
T. Van De Looverbosch, Jiaqi, H., Tempelaere, A., Kelchtermans, K., Verboven, P., Tuytelaars, T., Sijbers, J., and Nicolai, B., “Inline nondestructive internal disorder detection in pear fruit using explainable deep anomaly detection on X-ray images”, Computers and Electronics in Agriculture, vol. 197, no. 106962, pp. 1-14, 2022.
D. Giraldo, Smith, R. E., Struyfs, H., Niemantsverdriet, E., De Roeck, E., Bjerke, M., Engelborghs, S., Romero, E., Sijbers, J., and Jeurissen, B., “Investigating tissue-specific abnormalities in Alzheimer’s disease with multi-shell diffusion MRI”, Journal of Alzheimer's Disease, vol. 90, no. 4, pp. 1771-1791, 2022.
Q. Beirinckx, Jeurissen, B., Nicastro, M., Poot, D. H. J., Verhoye, M., den Dekker, A. J., and Sijbers, J., “Model-based super-resolution reconstruction with joint motion estimation for improved quantitative MRI parameter mapping”, Computerized Medical Imaging and Graphics, vol. 100, no. 102071, pp. 1-16, 2022.PDF icon Download paper (15.42 MB)PDF icon Download supplementary material (1.35 MB)
M. Nicastro, Jeurissen, B., Beirinckx, Q., Smekens, C., Poot, D. H. J., Sijbers, J., and den Dekker, A. J., “To shift or to rotate? Comparison of acquisition strategies for multi-slice super-resolution magnetic resonance imaging”, Frontiers in Neuroscience, pp. 1-18, 2022.PDF icon Download paper (5.96 MB)
2021
M. Naeyaert, Aelterman, J., Golkov, V., Cremers, D., Pizurica, A., Sijbers, J., and Verhoye, M., “Accelerating in vivo fast spin echo high angular resolution diffusion imaging with an isotropic resolution in mice through compressed sensing”, Magnetic Resonance in Medicine, vol. 85, no. 3, pp. 1397-1413, 2021.
D. Iuso, Nazemi, E., Six, N., De Samber, B., De Beenhouwer, J., and Sijbers, J., “CAD-based scatter compensation for polychromatic reconstruction of additive manufactured parts”, in IEEE ICIP, 2021.
M. Roshani, Phan, G., Roshani, G. Hossein, Hanus, R., Corniani, E., and Nazemi, E., “Combination of X-ray tube and GMDH neural network as a nondestructive and potential technique for measuring characteristics of gas-oil–water three phase flows”, Measurement, vol. 168, 2021.
M. Nicastro, Jeurissen, B., Beirinckx, Q., Smekens, C., Poot, D. H. J., Sijbers, J., and den Dekker, A. J., “Comparison of MR acquisition strategies for super-resolution reconstruction using the Bayesian Mean Squared Error”, in International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2021.
M. Roshani, Phan, G. T. T., Roshani, G. Hossein, Hanus, R., Duong, T., Corniani, E., Nazemi, E., and Kalmouni, E. M., “Evaluation of flow pattern recognition and void fraction measurement in two phase flow independent of oil pipeline’s scale layer thickness”, Alexandria Engineering Journal, vol. 60, 2021.
J. Sanctorum, Van Wassenbergh, S., Nguyen, V., De Beenhouwer, J., Sijbers, J., and Dirckx, J. J. J., “Extended imaging volume in cone-beam x-ray tomography using the weighted simultaneous iterative reconstruction technique”, Physics in Medicine and Biology, vol. 66, no. 16, 2021.PDF icon Download paper (4.28 MB)
M. Naeyaert, Golkov, V., Cremers, D., Sijbers, J., and Verhoye, M., “Faster and better HARDI using FSE and holistic reconstruction”, International Society for Magnetic Resonance in Medicine (ISMRM) Annual Meeting. 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
V. Nguyen, Sanctorum, J., Van Wassenbergh, S., Dirckx, J. J. J., Sijbers, J., and De Beenhouwer, J., “Geometry Calibration of a Modular Stereo Cone-Beam X-ray CT System”, Journal of Imaging, vol. 7, no. 54, pp. 1-12, 2021.PDF icon Download paper (4.2 MB)
E. Nazemi, Six, N., Iuso, D., De Samber, B., Sijbers, J., and De Beenhouwer, J., “Monte-Carlo-Based Estimation of the X-ray Energy Spectrum for CT Artifact Reduction”, Applied Sciences, vol. 11, no. 7, 2021.PDF icon Download paper (4.96 MB)
J. Renders, Nguyen, A. - T., De Beenhouwer, J., and Sijbers, J., “Motion compensating X-ray micro-CT of diamonds in a processing stage”, 31st International Conference on Diamond and Carbon Materials. 2021.
T. Van De Looverbosch, Raeymaekers, E., Verboven, P., Sijbers, J., and Nicolai, B., “Non-destructive internal disorder detection of Conference pears by semantic segmentation of X-ray CT scans using deep learning”, Expert Systems with Applications, vol. 176, no. 114925, pp. 1-12, 2021.

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