Publications

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2011
W J. Palenstijn, K. J. Batenburg, and J. Sijbers, "Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs)", Journal of structural biology, vol. 176, issue 2, pp. 250-253, 2011 Nov. Download full paper (838.52 KB)
J. Veraart, T. B. Leergaard, B. T. Antonsen, W. Van Hecke, I. Blockx, B. Jeurissen, Y. Jiang, A. Van Der Linden, A. G. Johnson, M. Verhoye, et al., "Population-averaged diffusion tensor imaging atlas of the Sprague Dawley rat brain", NeuroImage, vol. 58, issue 4, pp. 975-983, 2011.
B. Jeurissen, A. Leemans, D. K. Jones, J-D. Tournier, and J. Sijbers, "Probabilistic fiber tracking using the residual bootstrap with constrained spherical deconvolution", Human Brain Mapping, vol. 32, issue 3, pp. 461 - 479, March, 2011.
P. Fillard, M. Descoteaux, A. Goh, S. Gouttard, B. Jeurissen, J. Malcolm, A. Ramirez-Manzanares, M. Reisert, K. Sakaie, F. Tensaouti, et al., "Quantitative Evaluation of 10 Tractography Algorithms on a Realistic Diffusion MR Phantom", NeuroImage, vol. 56, no. 1, pp. 220-234, May, 2011.
Z. Mai, J. Rajan, M. Verhoye, and J. Sijbers, "Robust edge-directed interpolation of magnetic resonance images", Physics in medicine and biology, vol. 56, pp. 7287-7303, 2011. Download full paper (4.02 MB)
K. J. Batenburg, W. Van Aarle, and J. Sijbers, "A Semi-Automatic Algorithm for Grey Level Estimation in Tomography", Pattern Recognition Letters, vol. 32, no. 9, pp. 1395-1405, July, 2011. Download full paper (1.06 MB)
2010
T. Huysmans, J. Sijbers, and B. Verdonk, "Automatic Construction of Correspondences for Tubular Surfaces", IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, no. 4, pp. 636-651, 2010. Full text (3.67 MB)
W. Van Hecke, A. Leemans, S. De Backer, B. Jeurissen, P. M. Parizel, and J. Sijbers, "Comparing isotropic and anisotropic smoothing for voxel-based DTI analyses: A simulation study", Human Brain Mapping, vol. 31, no. 1, pp. 98-114, 2010.
W. Van Hecke, G. Nagels, A. Leemans, E. Vandervliet, J. Sijbers, and P. M. Parizel, "Correlation of cognitive dysfunction and diffusion tensor MRI measures in patients with mild and moderate multiple sclerosis", Journal of magnetic resonance imaging, vol. 31, no. 6, pp. 1492-1498, May, 2010.
K. J. Batenburg, J. Sijbers, H. F. Poulsen, and E. Knudsen, "DART: A Robust Algorithm for Fast Reconstruction of 3D Grain Maps", Journal of Applied Crystallography, vol. 43, pp. 1464-1473, 2010. Download full paper (1 MB)
Z. Mai, M. Verhoye, A. Van Der Linden, and J. Sijbers, "Diffusion tensor image up-sampling: a registration-based approach", Magnetic resonance Imaging, vol. 28, no. 10, pp. 1497-1506, December, 2010. Download full paper (814.96 KB)
K. Hufkens, G. Thoonen, J. Vanden Borre, P. Scheunders, and R. Ceulemans, "Habitat reporting of a heathland site: Classification probabilities as additional information, a case study", Ecological Informatics, vol. 5, no. 4, pp. 248 - 255, 2010.
D. H. J. Poot, W. Pintjens, M. Verhoye, A. Van Der Linden, and J. Sijbers, "Improved B0 field map estimation for high field EPI", Magnetic Resonance Imaging, vol. 28, no. 3, pp. 441-450, April, 2010. Download full paper (1.29 MB)
J. Juntu, J. Sijbers, S. De Backer, J. Rajan, and D. Van Dyck, "A Machine Learning Study of Several Classifiers Trained with Texture Analysis Features to Differentiate Benign from Malignant Soft Tissue Tumors in T1-MRI Images", Journal of Magnetic Resonance Imaging, vol. 31, pp. 680–689, 2010. Download full paper (912.79 KB)
N. Van Camp, R. Vreys, K. Van Laere, E. Lauwers, D. Beque, M. Verhoye, C. Casteels, A. Verbruggen, Z. Debyser, L. Mortelmans, et al., "Morphologic and functional changes in the unilateral 6-hydroxydopamine lesion rat model for Parkinson's disease discerned with microSPECT and quantitative MRI.", Magnetic Resonance Materials in Physics, Biology and Medicine, vol. 23, issue 2, pp. 65-75, 04/2010.
J. Rajan, D. H. J. Poot, J. Juntu, and J. Sijbers, "Noise measurement from magnitude MRI using local estimates of variance and skewness.", Physics in medicine and biology, vol. 55, issue 16, pp. N441-9, 2010 Aug 21. Download full paper (262.16 KB)
D. H. J. Poot, A J. den Dekker, E. Achten, M. Verhoye, and J. Sijbers, "Optimal experimental design for Diffusion Kurtosis Imaging", IEEE Transactions on Medical Imaging, vol. 29, no. 3, pp. 819-829, 2010. Download full paper (1.94 MB)
2009
K. J. Batenburg, S. Bals, J. Sijbers, C. Kubel, P. A. Midgley, J. C. Hernandez, U. Kaiser, E. R. Encina, E. A. Coronado, and G. Van Tendeloo, "3D imaging of nanomaterials by discrete tomography", Ultramicroscopy, vol. 109, pp. 730-740, 2009.
K. J. Batenburg, and J. Sijbers, "Adaptive thresholding of tomograms by projection distance minimization", Pattern Recognition, vol. 42, no. 10, pp. 2297-2305, April, 2009. Download full paper (1.05 MB)
W. Van Hecke, J. Sijbers, S. De Backer, D. H. J. Poot, P. M. Parizel, and A. Leemans, "On the construction of a ground truth framework for evaluating voxel-based diffusion tensor MRI analysis methods", NeuroImage, vol. 46, no. 3, pp. 692-707, July, 2009. Download full paper (4.12 MB)
W. Van Hecke, G. Nagels, G. Emonds, A. Leemans, J. Sijbers, J. van Goethem, and P. M. Parizel, "A diffusion tensor imaging group study of the spinal cord in multiple sclerosis patients with and without T2 spinal cord lesions.", Journal of magnetic resonance imaging : JMRI, vol. 30, issue 1, pp. 25-34, 2009 Jul.
N. Van Camp, I. Blockx, M. Verhoye, C. Casteels, F. Coun, A. Leemans, J. Sijbers, V. Baekelandt, K. Van Laere, and A. Van Der Linden, "Diffusion tensor imaging in a rat model of Parkinson's disease after lesioning of the nigrostriatal tract.", NMR in biomedicine, vol. 22, issue 7, pp. 697-706, 2009 Aug.
K. Hufkens, R. Ceulemans, and P. Scheunders, "Ecotones in vegetation ecology: methodology and definitions revisited", Ecological Research, vol. 24, pp. 977-986, 2009.
K. J. Batenburg, and J. Sijbers, "Generic iterative subset algorithms for discrete tomography", Discrete Applied Mathematics, vol. 157, no. 3, pp. 438-451, 2009. Download full paper (1.24 MB)
A. Postnov, T. T. De Schutter, J. Sijbers, M. Karperien, and N. De Clerck, "Glucocorticoid-Induced Osteoporosis in Growing Mice Is Not Prevented by Simultaneous Intermittent PTH Treatment", Calcified Tissue International, vol. 85, no. 6, pp. 530-537, December, 2009. Download full paper (956.22 KB)

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