Publications

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2009
K. J. Batenburg, and J. Sijbers, "Optimal Threshold Selection for Tomogram Segmentation by Projection Distance Minimization", IEEE Transactions on Medical Imaging, vol. 28, no. 5, pp. 676-686, June, 2009. Download full paper (2.51 MB)
H E. Bortier, A. Bernat, T. Huysmans, F. Van Glabbeek, J. Sijbers, R. Pinho, J. Gielen, and G. Hubens, "Osteologic exploration of the clavicle: a new approach", The FASEB Journal, (1_MeetingAbstracts), vol. 23, 2009.
C. A. Sage, W. Van Hecke, R. R. Peeters, J. Sijbers, W. Robberecht, P. M. Parizel, G. Marchal, A. Leemans, and S. Sunaert, "Quantitative diffusion tensor imaging in amyotrophic lateral sclerosis: revisited.", Human brain mapping, vol. 30, issue 11, pp. 3657-75, 2009 Nov.
G. Van Gompel, M. Defrise, and K. J. Batenburg, "Reconstruction of a uniform star object from interior x-ray data: uniqueness, stability and algorithm", Inverse Problems, vol. 25, no. 65010, June, 2009.
W. Van den Broek, J. Verbeeck, D. Schryvers, S. De Backer, and P. Scheunders, "Tomographic Spectroscopic Imaging; an experimental proof of concept", Ultramicroscopy, vol. 109, pp. 296-303, 2009.
K. Hufkens, P. Scheunders, and R. Ceulemans, "Validation of the sigmoid wave curve fitting algorithm on a forest-tundra ecotone in the Northwest Territories, Canada", Ecological Informatics, vol. 4, pp. 1-7, 2009.
A. Duijster, P. Scheunders, and S. De Backer, "Wavelet-Based EM Algorithm for Multispectral-Image Restoration", IEEE Transactions on Geoscience and Remote Sensing, vol. 47, no. 11, pp. 3892-3898, November, 2009.
2008
W. Van Hecke, J. Sijbers, E. D'Agostino, F. Maes, S. De Backer, E. Vandervliet, P. M. Parizel, and A. Leemans, "On the construction of an inter-subject diffusion tensor magnetic resonance atlas of the healthy human brain", NeuroImage, vol. 43, no. 1, pp. 69-80, 2008. Download full paper (3.34 MB)
S. De Backer, A. Pizurica, B. Huysmans, W. Philips, and P. Scheunders, "Denoising of Multicomponent Images Using Wavelet Least-Squares Estimators", Image and Vision Computing, vol. 26, no. 7, pp. 1038-1051, July, 2008.
K. Hufkens, R. Ceulemans, and P. Scheunders, "Estimating the ecotone width in patchy ecotones using a sigmoid wave approach", Ecological Informatics, vol. 3, pp. 97-104, 2008.
T. Boumans, C. Vignal, A. Smolders, J. Sijbers, M. Verhoye, J. Van Audekerke, and A. Van Der Linden, "Functional magnetic resonance imaging in zebra finch discerns the neural substrate involved in segregation of conspecific song from background noise", Journal of Neurophysiology, vol. 99, pp. 931-938, November, 2008. Download full paper (832.59 KB)
P. Kempeneers, P. J. Zarco-Tejada, P. R. J. North, S. De Backer, S. Delalieux, G. Sepulcre-Canto, F. Morales, J. van Aardt, R. Sagardoy, P. Coppin, et al., "Model inversion for chlorophyll estimation in open canopies from hyperspectral imagery", International Journal of Remote Sensing, vol. 29, no. 17, pp. 5093-5111, 2008.
S. De Backer, F. Cornelissen, J. Lemeire, R. Nuydens, T. Meert, P. Schelkens, and P. Scheunders, "Mosiacing of Fibered Fluorescence Microscopy Video", Lecture notes in Computer Science, vol. 5259, pp. 915-923, October, 2008.
J. Driesen, and P. Scheunders, "A Multicomponent Image Segmentation Framework", Lecture Notes in Computer Science, vol. 5259, pp. 589-600, 2008.
W. Van Hecke, A. Leemans, J. Sijbers, E. Vandervliet, J. Van Goethem, and P. M. Parizel, "A tracking based DTI segmentation method for the detection of diffusion-related changes of the cervical spinal cord with aging", Journal of Magnetic Resonance Imaging, vol. 27, no. 5, pp. 978-991, March, 2008. Download full paper (4.41 MB)
2007
J. Sijbers, D. H. J. Poot, A J. den Dekker, and W. Pintjens, "Automatic estimation of the noise variance from the histogram of a magnetic resonance image", Physics in Medicine and Biology, vol. 52, no. 5, pp. 1335-1348, February, 2007. Download full paper (916.32 KB)
Z. Mai, T. Huysmans, and J. Sijbers, "Colon Visualization Using Cylindrical Parameterization", Lecture Notes in Computer Science, vol. 4678, pp. 607-615, 2007. Full text (1.44 MB)
A. Smolders, D. F. Martino, N. Staeren, P. Scheunders, J. Sijbers, R. Goebel, and E. Formisano, "Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis", Magnetic Resonance Imaging, vol. 25, no. 6, pp. 860-868, July, 2007. mri07.pdf (658.36 KB)
P. M. Parizel, V. Van Rompaey, V. R. Loock, W. Van Hecke, J. Van Goethem, A. Leemans, and J. Sijbers, "Influence of User-Defined Parameters on Diffusion Tensor Tractography of the Corticospinal Tract", The Neuroradiology Journal, no. 20, pp. 139-147, 2007.
A. Duijster, S. De Backer, and P. Scheunders, "Multicomponent image restoration, an experimental study", Lecture Notes in Computer Science, vol. 4633, pp. 58-68, 2007.
W. Van Hecke, A. Leemans, E. D'Agostino, S. De Backer, E. Vandervliet, P. M. Parizel, and J. Sijbers, "Nonrigid Coregistration of Diffusion Tensor Images Using a Viscous Fluid Model and Mutual Information", IEEE Transactions on Medical Imaging, vol. 26, no. 11, pp. 1598-1612, 2007. Download paper (1.85 MB)
S. Bals, K. J. Batenburg, J. Verbeeck, J. Sijbers, and G. Van Tendeloo, "Quantitative three-dimensional reconstruction of catalyst particles for bamboo-like carbon nanotubes", Nano Letters, vol. 7, no. 12, pp. 3669-3674, 2007. Download full paper (318.46 KB)
P. Scheunders, and S. De Backer, "Wavelet denoising of multicomponent images, using Gaussian Scale Mixture models and a noise-free image as priors", IEEE Transactions on Image Processing, vol. 16, no. 7, pp. 1865-1872, July, 2007.
2006
W. Van den Broek, J. Verbeeck, S. De Backer, P. Scheunders, and D. Schryvers, "Acquisition of the EELS data cube by tomographic reconstruction", Ultramicroscopy, vol. 106, no. 3, pp. 269-276, March, 2006.
T. Huysmans, J. Sijbers, F. Vanpoucke, and B. Verdonk, "Improved Shape Modeling of Tubular Objects Using Cylindrical Parameterization", Lecture Notes in Computer Science, vol. 4091, pp. 84-91, 2006. Full text (3.39 MB)

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