Publications

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Journal Article
W. S. Oliveira, Teixeira, J. V., Tsang, I. R., Cavalcanti, G. D. C., and Sijbers, J., “Unsupervised Retinal Vessel Segmentation Using Combined Filters”, Plos One, vol. 11, pp. 1-21, 2016.
D. Van Dyck, Bettens, E., Sijbers, J., Op de Beeck, M., van den Bos, A., den Dekker, A. J., Jansen, J., and Zandbergen, H., “Towards quantitative structure determination through electron holographic methods”, Materials Characterization, vol. 42, pp. 265-281, 1999.PDF icon Download paper (6.71 MB)
N. J. Forde, O'Donoghue, S., Scanlon, C., Emsell, L., Chaddock, C., Leemans, A., Jeurissen, B., Barker, G. J., Cannon, D. M., Murray, R. M., and others, “Structural brain network analysis in families multiply affected with bipolar I disorder”, Psychiatry Research: Neuroimaging, vol. 234, pp. 44–51, 2015.
N. J. Forde, O'Donoghue, S., Scanlon, C., Emsell, L., Chaddock, C., Leemans, A., Jeurissen, B., Barker, G. J., Cannon, D. M., Murray, R. M., and others, “Structural brain network analysis in families multiply affected with bipolar I disorder”, Psychiatry Research: Neuroimaging, vol. 234, pp. 44–51, 2015.
J. Fatermans, den Dekker, A. J., Müller-Caspary, K., Lobato, I., O'Leary, C. M., Nellist, P. D., and Van Aert, S., “Single Atom Detection from Low Contrast-to-Noise Ratio Electron Microscopy Images”, Phys. Rev. Lett., vol. 121, p. 056101, 2018.
M. Van Dael, Lebotsa, S., Herremans, E., Verboven, P., Sijbers, J., Opara, U. L., Cronje, U. L., and Nicolai, B., “A segmentation and classification algorithm for online detection of internal disorders in citrus using X-ray radiographs”, Postharvest Biology and Technology, vol. 112, pp. 205-214, 2016.
H. K. Jenssen, Oberlander, B. C., De Beenhouwer, J., Sijbers, J., and Verwerft, M., “Neutron radiography and tomography applied to fuel degradation during ramp tests and loss of coolant accident tests in a research reactor”, Progress in Nuclear Energy, vol. 72, pp. 55-62, 2014.
R. F. Kooy, Reyniers, E., Verhoye, M., Sijbers, J., Cras, P., Oostra, B. A., Willems, P. J., and Van Der Linden, A., “Neuroanatomy of the fragile X knockout mouse brain studied using in vivo high resolution Magnetic Resonance Imaging (MRI)”, European Journal of Human Genetics, vol. 7, pp. 526-532, 1999.PDF icon ejhg99.pdf (261.08 KB)
I. Blockx, De Groof, G., Verhoye, M., Van Audekerke, J., Raber, K., Poot, D. H. J., Sijbers, J., Osmand, A. P., Von Hörsten, S., and Van Der Linden, A., “Microstructural changes observed with DKI in a transgenic Huntington rat model: Evidence for abnormal neurodevelopment.”, NeuroImage, vol. 59, pp. 957-67, 2012.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
D. Van Dyck, Bettens, E., Sijbers, J., Op de Beeck, M., den Dekker, A. J., and van den Bos, A., “From High Resolution Image to Atomic Structure: how fare are we?”, Scanning Microscopy, Special Issue on Image Processing, vol. 11, pp. 467-478, 1997.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
E. Bettens, Scheunders, P., Van Dyck, D., Moens, L., and Osta, V. P., “Computer Analysis of Two-Dimensional Electrophoresis Gels : A New Segmentation and Modeling Algorithm”, Electrophoresis, vol. 18, pp. 792-798, 1997.
A. Doroshin, Jillings, S., Jeurissen, B., Tomilovskaya, E., Pechenkova, E. V., Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., De Laet, C., Schoenmaekers, C., Sijbers, J., Laureys, S. S. L., Petrovichev, V., Van Ombergen, A., Annen, J., Sunaert, S., Parizel, P. M., Sinitsyn, V., Eulenburg, Pzu, Osipowicz, K., and Wuyts, F. L., “Brain Connectometry Changes in Space Travelers After Long-Duration Spaceflight”, Front. Neural Circuits, vol. 16, 2022.
P. Lopes, Van Herck, P., Ooms, J., Van Mieghem, N., Wirix-Speetjens, R., Sijbers, J., Vander Sloten, J., and Bosmans, J., “Automated Mitral Valve Assessment for Transcatheter Mitral Valve Replacement (TMVR) Planning”, Frontiers in Bioengineering and Biotechnology, vol. 16, pp. 1-13, 2022.PDF icon Download paper (2.19 MB)
Conference Paper
J. Osstyn, Danckaers, F., Verstreken, A., Van Haver, A., Vanhees, M., and Sijbers, J., “Statistical shape model guided virtual reduction of displaced distal radius fractures”, in IEEE International Symposium on Biomedical Imaging, In Press.
R. F. Kooy, Reyniers, E., Verhoye, M., Sijbers, J., Oostra, B. A., Willems, P. J., and Van Der Linden, A., “Neuroanatomy of the fragile X knockout mouse brain studied using high-resolution MRI”, in 48th Annual Meeting of the American Society of Human Genetics, Denver, CO (USA), 1998, p. 1918.
R. F. Kooy, Reyniers, E., Verhoye, M., Sijbers, J., Fransen, E., Van Camp, C., Cras, P., Oostra, B. A., Van Der Linden, A., and Willems, P. J., “MRI as a tool to study brain structure from mouse models of mental retardation”, in Abstracts of the 8th international workshop on Fragile X syndrome and X-linked mental retardation, Picton, Ontario, Canada, 1997.
M. Verhoye, Sijbers, J., Kooy, R. F., Reyniers, E., Fransen, E., Oostra, B. A., Willems, P. J., and Van Der Linden, A., “MRI as a tool to study brain structure from mouse models of mental retardation”, in Proceedings of SPIE Medical Imaging, San Diego, CA, USA, 1998, vol. 3337, pp. 314-320.
M. Verhoye, Sijbers, J., Scheunders, P., Van Dyck, D., Reyniers, E., Kooy, R. F., Willems, P. J., Cras, P., Oostra, B. A., and Van Der Linden, A., “In vivo assessment of cerebellum volume in transgenic fragile X knockout mice using MTI microscopy at 7T”, in Proceedings of the European Society for Magnetic Resonance in Medicine and Biology: 14th annual meeting, Brussels, Belgium, 1997, vol. 2, pp. 45-46.
M. Verhoye, Sijbers, J., Kooy, R. F., Reyniers, E., Fransen, E., Oostra, B. A., Willems, P. J., and Van Der Linden, A., “In vivo assessment of cerebellum volume in transgenic Fragile X Knockout mice using MRI microscopy at 7T”, in Proceedings of the International Society for Magnetic Resonance in Medicine, Sydney, Australia, 1998.
M. Verhoye, Van Der Linden, A., Sijbers, J., Scheunders, P., Van Dyck, D., Reyniers, E., Kooy, R. F., Willems, P. J., Cras, P., and Oostra, B. A., “High resolution MRI study of the cerebellum of mice as a function of age, in a mouse model for fragile X mental retardation”, in Proceedings of the European Society for Magnetic Resonance in Medicine and Biology, Prague, Czech Republic, 1996, vol. 2, p. 168.
R. F. Kooy, Reyniers, E., Dhooghe, R., De Deyn, P. P., Van Der Linden, A., Verhoye, M., Sijbers, J., Oostra, B. A., and Willems, P. J., “Characterization of the Fragile X knockout mouse”, in Abstracts of the second annual meeting of the Belgian society of neuroscience, Brussels, Belgium, 1997.
J. Osstyn, Danckaers, F., Van Haver, A., Oramas, J., Vanhees, M., and Sijbers, J., “Automated virtual reduction of displaced distal radius fractures”, in IEEE International Symposium on Biomedical Imaging, Cartagena, Colombia, 2023, pp. 1-4.

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