Publications

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In Press
G. Tang, Jillings, S., Jeurissen, B., Tomilovskaya, E., Nosikova, I., Riabova, A., Pechenkova, E. V., Petrovichev, V., Rukavishnikov, I., Sunaert, S., Parizel, P. M., Makovskaya, L., Sinitsyn, V., Sijbers, J., Annen, J., Laureys, S. S. L., Van Ombergen, A., Ahmadi, S. - A., Wuyts, F. L., and Eulenburg, Pzu, “Physiological cerebrospinal fluid interactions between brain and eye structures are altered after long-duration spaceflight”, Experimental Physiology, In Press.
2026
C. Bossuyt, den Dekker, A. J., Iuso, D., De Beenhouwer, J., and Sijbers, J., “Framework for optimal design of a multi-source rectangular X-ray cargo scanning system”, Radiation Physics and Chemistry, vol. 239, p. 113332, 2026.PDF icon Download paper (2.13 MB)
M. Yosifov, Fernandes, T. Linhares, Zanini, F., Carmignato, S., De Beenhouwer, J., Sijbers, J., Kastner, J., and Heinzl, C., “Investigating the Influence of Individual Physical Effects on Dimensional Measurement Deviations Using XCT Simulations”, Measurement, vol. 263, no. 120168, 2026.
2025
J. Merckx, den Dekker, A. J., Sijbers, J., and De Beenhouwer, J., “DAMMER: Direct Adaptive Multi-resolution MEsh Reconstruction from X-ray measurements”, IEEE Transactions on Computational Imaging , vol. 11, pp. 926 - 941, 2025.
C. Smekens, Beirinckx, Q., Bosmans, F., Vanhevel, F., Snoeckx, A., Sijbers, J., Jeurissen, B., Janssens, T., and Van Dyck, P., “Deep Learning-Enhanced Accelerated 2D TSE and 3D Super-Resolution Dixon TSE for Rapid Comprehensive Knee Joint Assessment”, Investigative Radiology, vol. 60, no. 3, pp. 220-233, 2025.
M. Yosifov, Lang, T., Florian, V., Gerth, S., De Beenhouwer, J., Sijbers, J., Kastner, J., and Heinzl, C., “Degradation Detection in Rice Products via Shape Variations in XCT Simulation-Empowered AI”, Journal of Nondestructive Evaluation, vol. 44, no. 10, 2025.
B. Huyge, Francken, N., Sanctorum, J., Sanctorum, J., De Beenhouwer, J., and Sijbers, J., “Edge illumination X-ray phase contrast imaging with continuous mask motion”, Optics Express, vol. 33, no. 19, pp. 41271-41286, 2025.PDF icon Download paper (4.78 MB)
N. Francken, Sanctorum, J., Huyge, B., Sijbers, J., and De Beenhouwer, J., “Efficient X-ray dark field contrast simulations using a condensed history approach”, Optics Express, vol. 33, no. 2, pp. 3562-3576, 2025.
K. Duquesne, Adris, M., Huysentruyt, R., Van Oevelen, A., Li, J., Sijbers, J., Van Paepegem, W., and Audenaert, E., “From Skin to Skeleton: A Statistical Shape Modelling Approach for Predicting Hand and Foot Bony Geometry”, Annals of Biomedical Engineering, 2025.
P. - J. Vanthienen, Francken, N., Sanctorum, J., Sijbers, J., and De Beenhouwer, J., “Gratings for multiresolution edge illumination X-ray phase contrast imaging: concept and simulation”, Optics Express, vol. 33, no. 8, pp. 17886-17902, 2025.
M. Siqueira Pinto, Anania, V., Paolella, R., Smekens, C., Billiet, T., Janssens, T., den Dekker, A. J., Sijbers, J., Guns, P. - J., and Van Dyck, P., “Harmonization of diffusion MRI on healthy subjects using NeuroCombat and LongCombat: a B-Q MINDED Brain Intra-and Inter-Scanner Study”, Frontiers in Neuroscience, vol. 19, 2025.
H. Khan, Giraldo, D., Woodruff, H. C., Werthen-Brabants, L., Mali, S. Atul, Amirrajab, S., De Brouwer, E., Popescu, V., Van Wijmeersch, B., Gerlach, O., Sijbers, J., Peeters, L. M., and Lambin, P., “Leveraging Hand-Crafted Radiomics on Multicenter FLAIR MRI for Predicting Disability Worsening in People with Multiple Sclerosis”, Front. Neurosci., vol. 19, 2025.
Y. Huybrechts, De Ridder, R., Bergen, D., De Samber, B., Boudin, E., Tonelli, F., Knapen, D., Vergauwen, L., Schepers, D., Van Dijck, E., Tong, Q., Verhulst, A., De Beenhouwer, J., Sijbers, J., Hammond, C., Forlino, A., Mortier, G., Coucke, P., P Witten, E., Kwon, R. Young, Willaert, A., Hendrickx, G., and Van Hul, W., “Loss of the Ubiquitin-Associated Domain of sqstm1/p62 in Zebrafish Causes a Phenotype Resembling Paget’s Disease of Bone”, Calcified Tissue International, vol. 116, no. 1, pp. 1-15, 2025.
J. Sanctorum, Sijbers, J., and De Beenhouwer, J., “Multi-contrast benchmarking of edge illumination Monte Carlo simulations using virtual gratings”, Journal of Applied Physics, vol. 137, no. 10, p. 104904, 2025.
K. Duquesne, Van Oevelen, A., Sijbers, J., Van Paepegem, W., and Audenaert, E., “A novel Soft Tissue-Integrated Kinematic Solver for skeletal motion: Validation and applications”, Computer Methods and Programs in Biomedicine, vol. 265, 2025.
T. Van De Looverbosch, De Beuckeleer, S., De Smet, F., Sijbers, J., and De Vos, W., “Proximity Adjusted Centroid Mapping for Accurate Detection of Nuclei in Dense 3D Cell Systems”, Computers in Biology and Medicine, vol. 185, p. 109561, 2025.
K. Vinay Jambhali, Koirala, B., Bnoulkacem, Z., and Scheunders, P., “Soil Moisture Content Estimation From Hyperspectral Remote Sensing Data”, IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 18, pp. 22231-22240, 2025.PDF icon soil_moisture_content_estimation_from_hyperspectral_remote_sensing_data_1_.pdf (9.35 MB)
X. Tao, Koirala, B., Rasti, B., Plaza, A., and Scheunders, P., “A Spectral-Spatial Attention Network for Hyperspectral Unmixing”, IEEE Transactions on Geoscience and Remote Sensing, vol. 63, pp. 1-15, 2025.PDF icon assun.pdf (2.01 MB)
M. Yosifov, Fröhler, B., Sijbers, J., De Beenhouwer, J., Kastner, J., and Heinzl, C., “Superimposing Synthetic Defects into Real XCT Data and Segmentation-Based Comparison for Advanced Probability of Detection Evaluation”, Journal of Nondestructive Evaluation , vol. 44, no. 119, 2025.
J. Van der Rauwelaert, Bossuyt, C., Verleden, S., and Sijbers, J., “SwinIR-based Dual-Domain Reconstruction for Sparse-View Computed Tomography”, Journal of Nondestructive Evaluation, vol. 44, no. 111, 2025.
2024
J. Grammens, Van Haver, A., Lumban-Gaol, I., Danckaers, F., Verdonck, P., and Sijbers, J., “Automated landmark annotation for morphometric analysis of distal femur and proximal tibia”, Journal of Imaging, vol. 10, no. 4, 2024.PDF icon Download paper (2.06 MB)
P. Paramonov, Francken, N., Renders, J., Iuso, D., Elberfeld, T., De Beenhouwer, J., and Sijbers, J., “CAD-ASTRA: A versatile and efficient mesh projector for X-ray tomography with the ASTRA-toolbox”, Optics Express, vol. 32, no. 3, pp. 3425-3439, 2024.PDF icon Download paper (11.29 MB)
F. Schmidt, Koirala, B., and Andrieu, F., “Determination of volumetric abundance of intimate mixture using Bayesian MCMC”, IEEE Sensors Journal, pp. 1-1, 2024.PDF icon Download paper (2.8 MB)
J. Renders, Mancini, L., De Beenhouwer, J., and Sijbers, J., “Direct reconstruction of wet foam from sparse-view, dynamic X-ray CT scans”, Advanced Engineering Materials, vol. 2400957, pp. 1-10, 2024.PDF icon Download paper (2.77 MB)
N. Francken, Sanctorum, J., Paramonov, P., Sijbers, J., and De Beenhouwer, J., “Edge illumination x-ray phase contrast simulations using the CAD-ASTRA toolbox”, Optics Express, vol. 32, no. 6, pp. 10005-10021, 2024.

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