Publications

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2016
D. Zanaga, Bleichrodt, F., Altantzis, T., Winckelmans, N., Palenstijn, W. J., Sijbers, J., de Nijs, B., van Huis, M. A., Sánchez-Iglesias, A., Liz-Marzán, L. M., van Blaaderen, A., Batenburg, K. J., Bals, S., and Van Tendeloo, G., Quantitative 3D analysis of huge nanoparticle assemblies., Nanoscale, vol. 8, no. 1, pp. 292-9, 2016.
M. Van Dael, Lebotsa, S., Herremans, E., Verboven, P., Sijbers, J., Opara, U. L., Cronje, U. L., and Nicolai, B., A segmentation and classification algorithm for online detection of internal disorders in citrus using X-ray radiographs, Postharvest Biology and Technology, vol. 112, pp. 205-214, 2016.
A. De Backer, van den Bos, K. H. W., Van den Broek, W., Sijbers, J., and Van Aert, S., StatSTEM: An efficient approach for accurate and precise model-based quantification of atomic resolution electron microscopy images, Ultramicroscopy, vol. 171, pp. 104–116, 2016.
G. Van Steenkiste, Jeurissen, B., Veraart, J., den Dekker, A. J., Parizel, P. M., Poot, D. H. J., and Sijbers, J., Super-resolution reconstruction of diffusion parameters from diffusion-weighted images with different slice orientations, Magnetic Resonance in Medicine, vol. 75, no. 1, pp. 181-195, 2016.
S. De Santis, Assaf, Y., Jeurissen, B., Jones, D. K., and Roebroeck, A., T1 relaxometry of crossing fibres in the human brain., NeuroImage, 2016.
W. S. Oliveira, Teixeira, J. V., Tsang, I. R., Cavalcanti, G. D. C., and Sijbers, J., Unsupervised Retinal Vessel Segmentation Using Combined Filters, Plos One, vol. 11, pp. 1-21, 2016.
2015
D. Kazantsev, Thompson, W. M., Lionheart, W. R. B., Van Eyndhoven, G., Kaestner, A. P., Dobson, K. J., Withers, P. J., and Lee, P. D., 4D-CT reconstruction with unified spatial-temporal patch-based regularization, Inverse Problems and Imaging, vol. 9, no. 2, pp. 447-467, 2015.
U. Roine, Roine, T., Salmi, J., Nieminen-von Wendt, T., Tani, P., Leppämäki, S., Rintahaka, P., Caeyenberghs, K., Leemans, A., and Sams, M., Abnormal wiring of the connectome in adults with high-functioning autism spectrum disorder, Molecular Autism, vol. 6, p. 65, 2015.PDF icon Download paper (1.64 MB)
W. Van Aarle, Ludwig, W., King, A., and Penumadu, D., An accurate projection model for diffraction image formation and inversion using a polychromatic cone beam, Journal of Applied Crystallography, vol. 48, pp. 334-343, 2015.
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
A. Karami, Heylen, R., and Scheunders, P., Band-specific Shearlet-based Hyperspectral Image Noise Reduction, IEEE Transaction Geosciences and Remote Sensing , vol. 53, no. 9, 2015.
F. Danckaers, Huysmans, T., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Building a Statistical Shape Model of the Apple from Corresponded Surfaces, Chemical Engineering Transactions, vol. 44, pp. 49-54, 2015.PDF icon Download paper (696.94 KB)
U. Roine, Salmi, J., Roine, T., Nieminen-von Wendt, T., Leppämäki, S., Rintahaka, P., Tani, P., Leemans, A., and Sams, M., Constrained spherical deconvolution-based tractography and tract-based spatial statistics show abnormal microstructural organization in Asperger syndrome, Molecular Autism, vol. 6, p. 4, 2015.PDF icon Download paper (1.75 MB)
H. Struyfs, Van Hecke, W., Veraart, J., Sijbers, J., Slaets, S., De Belder, M., Wuyts, L., Peters, B., Sleegers, K., Robberecht, C., Van Broeckhoven, C., De Belder, F., Parizel, P. M., and Engelborghs, S., Diffusion Kurtosis Imaging: a possible MRI biomarker for AD diagnosis?, Journal of Alzheimer’s Disease, vol. 48, pp. 937-948, 2015.PDF icon Download paper (374.95 KB)
V. Van Nieuwenhove, De Beenhouwer, J., De Carlo, F., Mancini, L., Marone, F., and Sijbers, J., Dynamic intensity normalization using eigen flat fields in X-ray imaging, Optics Express, vol. 23, no. 21, pp. 27975-27989, 2015.Package icon Download Matlab code (2.92 MB)PDF icon Download paper (1.68 MB)
D. Perrone, Aelterman, J., Piżurica, A., Jeurissen, B., Philips, W., and Leemans, A., The effect of Gibbs ringing artifacts on measures derived from diffusion MRI, NeuroImage, vol. 120, pp. 441–455, 2015.
D. Kazantsev, Van Eyndhoven, G., Lionheart, W. R. B., Withers, P. J., Dobson, K. J., McDonald, S. A., Atwood, R., and Lee, P. D., Employing temporal self-similarity across the entire time domain in computed tomography reconstruction, Philosophical Transactions of the Royal Society of London A: Mathematical, Physical and Engineering Sciences, vol. 373, 2015.
D. Lacko, Huysmans, T., Parizel, P. M., De Bruyne, G., Verwulgen, S., Van Hulle, M. M., and Sijbers, J., Evaluation of an anthropometric shape model of the human scalp, Applied Ergonomics, vol. 48, pp. 70-85, 2015.PDF icon Paper (3.63 MB)File Shape matrix (cfr section 2.1.1) (36.93 MB)File Measurement matrix (cfr section 2.2.1) (20.05 KB)File Labeled measurements (cfr section 2.2.1) (47.63 KB)
S. Van der Jeught, Sijbers, J., and Dirckx, J. J. J., Fast Fourier-based phase unwrapping on the graphics processing unit in real-time imaging applications, Journal of Imaging, vol. 1, pp. 31-44, 2015.PDF icon Download paper (1.35 MB)
E. Janssens, Pelt, D., De Beenhouwer, J., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., Fast Neural Network Based X-Ray Tomography of Fruit on a Conveyor Belt, Chemical Engineering Transactions, vol. 44, pp. 181-186, 2015.
M. A. Akhter, Heylen, R., and Scheunders, P., A geometric matched filter for hyperspectral target detection and partial unmixing, IEEE Geoscience and Remote Sensing letters, vol. 12, pp. 661-665, 2015.
L. Tits, Heylen, R., Somers, B., Scheunders, P., and Coppin, P., A geometric unmixing concept for the selection of optimal binary endmember combinations, IEEE Geoscience and Remote Sensing letters, vol. 12, pp. 82-86, 2015.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Philips, W., Leemans, A., and Sijbers, J., Informed constrained spherical deconvolution (iCSD), Medical Image Analysis, vol. 24, no. 1, pp. 269–281, 2015.PDF icon Download accepted manuscript (987.95 KB)
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Leemans, A., Philips, W., and Sijbers, J., Isotropic non-white matter partial volume effects in constrained spherical deconvolution, Information-based methods for neuroimaging: analyzing structure, function and dynamics, p. 112, 2015.
G. Van Eyndhoven, Batenburg, K. J., Kazantsev, D., Van Nieuwenhove, V., Lee, P. D., Dobson, K. J., and Sijbers, J., An iterative CT reconstruction algorithm for fast fluid flow imaging, IEEE Transactions on Image Processing, vol. 24, no. 11, pp. 4446-4458, 2015.

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