Publications

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2026
G. Tang, Jillings, S., Jeurissen, B., Tomilovskaya, E., Nosikova, I., Riabova, A., Pechenkova, E. V., Petrovichev, V., Rukavishnikov, I., Sunaert, S., Parizel, P. M., Makovskaya, L., Sinitsyn, V., Sijbers, J., Annen, J., Laureys, S. S. L., Van Ombergen, A., Ahmadi, S. - A., Wuyts, F. L., and Eulenburg, Pzu, “Physiological cerebrospinal fluid interactions between brain and eye structures are altered after long-duration spaceflight”, Experimental Physiology, 2026.
S. Mandija, Arduino, A., Cui, C., Fuchs, P., Giannakopoulos, I. I., Ider, Y. Ziya, Jung, K. - J., Katoch, N., Katscher, U., Kim, D. - H., Lattanzi, R., Meerbothe, T., Odille, F., Shmueli, K., Soullié, P., Tha, K. Khin, Zilberti, L., and van den Berg, C. A. T., “Standardization of MR Electrical Properties Tomography: A Guideline From the ISMRM Electro-Magnetic Tissue Properties Study Group.”, J Magn Reson Imaging, 2026.
S. Mandija, Arduino, A., Cui, C., Fuchs, P., Giannakopoulos, I. I., Ider, Y. Ziya, Jung, K. - J., Katoch, N., Katscher, U., Kim, D. - H., Lattanzi, R., Meerbothe, T., Odille, F., Shmueli, K., Soullié, P., Tha, K. Khin, Zilberti, L., and van den Berg, C. A. T., “Standardization of MR Electrical Properties Tomography: A Guideline From the ISMRM Electro-Magnetic Tissue Properties Study Group.”, J Magn Reson Imaging, 2026.
2025
J. Merckx, den Dekker, A. J., Sijbers, J., and De Beenhouwer, J., “DAMMER: Direct Adaptive Multi-resolution MEsh Reconstruction from X-ray measurements”, IEEE Transactions on Computational Imaging , vol. 11, pp. 926 - 941, 2025.
J. Merckx, den Dekker, A. J., Sijbers, J., and De Beenhouwer, J., “DAMMER: Direct Adaptive Multi-Resolution MEsh Reconstruction From X-Ray Measurements”, IEEE Transactions on Computational Imaging , vol. 11, no. 941, 2025.
J. Deng, Meenaketan, B. Linkoon P., Takalloo, S. Ebrahimi, Chai, Y. Chin, Torfs, T., Braeken, D., De Beenhouwer, J., and Sijbers, J., “In-depth imaging of in-vitro tissue models using electrical impedance tomography”, in iCT 2025 - 14th Conference on Industrial Computed Tomography, 2025, vol. 4 - 7 February.
C. Milovic, Fuchs, P., Lambert, M., Arsenov, O., Kiersnowski, O. C., Muralidharan, L., Murdoch, R., Nassar, J., and Shmueli, K., “Investigating the effect of masking and background field removal algorithms on the quality of QSM reconstructions using a realistic numerical head phantom.”, Neuroimage, p. 121499, 2025.
C. Milovic, Fuchs, P., Lambert, M., Arsenov, O., Kiersnowski, O. C., Muralidharan, L., Murdoch, R., Nassar, J., and Shmueli, K., “Investigating the effect of masking and background field removal algorithms on the quality of QSM reconstructions using a realistic numerical head phantom.”, Neuroimage, p. 121499, 2025.
C. Milovic, Fuchs, P., Lambert, M., Arsenov, O., Kiersnowski, O. C., Muralidharan, L., Murdoch, R., Nassar, J., and Shmueli, K., “Investigating the effect of masking and background field removal algorithms on the quality of QSM reconstructions using a realistic numerical head phantom.”, Neuroimage, p. 121499, 2025.
H. Khan, Giraldo, D., Woodruff, H. C., Werthen-Brabants, L., Mali, S. Atul, Amirrajab, S., De Brouwer, E., Popescu, V., Van Wijmeersch, B., Gerlach, O., Sijbers, J., Peeters, L. M., and Lambin, P., “Leveraging Hand-Crafted Radiomics on Multicenter FLAIR MRI for Predicting Disability Worsening in People with Multiple Sclerosis”, Front. Neurosci., vol. 19, 2025.
Y. Huybrechts, De Ridder, R., Bergen, D., De Samber, B., Boudin, E., Tonelli, F., Knapen, D., Vergauwen, L., Schepers, D., Van Dijck, E., Tong, Q., Verhulst, A., De Beenhouwer, J., Sijbers, J., Hammond, C., Forlino, A., Mortier, G., Coucke, P., P Witten, E., Kwon, R. Young, Willaert, A., Hendrickx, G., and Van Hul, W., “Loss of the Ubiquitin-Associated Domain of sqstm1/p62 in Zebrafish Causes a Phenotype Resembling Paget’s Disease of Bone”, Calcified Tissue International, vol. 116, no. 1, pp. 1-15, 2025.
2024
J. Renders, Mancini, L., De Beenhouwer, J., and Sijbers, J., “Direct reconstruction of wet foam from sparse-view, dynamic X-ray CT scans”, Advanced Engineering Materials, vol. 2400957, pp. 1-10, 2024.PDF icon Download paper (2.77 MB)
D. Gökbel Keklikoğlu, Francken, N., Huyge, B., Merdan, Z., De Beenhouwer, J., and Sijbers, J., “Dynamic flat field correction in edge illumination imaging”, in SPIE Developments in X-Ray Tomography XV, 2024, vol. 13152.
J. Ruano-Balseca, Bravo, D., Giraldo, D., Gómez, M., Gonzalez, F. A., Manzanera, A., and Romero, E., “Estimating Polyp Size From a Single Colonoscopy Image Using a Shape-From-Shading Model”, in 2024 IEEE International Symposium on Biomedical Imaging (ISBI), 2024, pp. 1-5.
J. Merckx, den Dekker, A. J., De Beenhouwer, J., and Sijbers, J., “Fast and efficient tetrahedral volume mesh reconstruction with CAD-ASTRA”, in SPIE Developments in X-Ray Tomography XV, San Diego, USA, 2024, vol. 13152.
J. Merckx, den Dekker, A. J., De Beenhouwer, J., and Sijbers, J., “Fast and efficient tetrahedral volume mesh reconstruction with CAD-ASTRA”, in SPIE Optics + Photonics, San Diego, 2024.
J. Deng, Renders, J., Meenaketan, B. Linkoon P., Takalloo, S. Ebrahimi, Braeken, D., De Beenhouwer, J., and Sijbers, J., “Imaging Algorithm and Optimal Measurement Protocol for 3D Impedance Tomography on 2D High Density Micro Electrode Array”, IEEE Sensors, vol. 24, no. 15, pp. 24452-24465, 2024.
A. Murcia-Tapias, Giraldo, D., and Romero, E., “Synthesizing fractional anisotropy maps from T1-weighted magnetic resonance images using a simplified generative adversarial network”, in Medical Imaging 2024: Clinical and Biomedical Imaging, 2024, vol. 12930, p. 129302P.
J. Grammens, Van Haver, A., Danckaers, F., Vuylsteke, K., Sijbers, J., Mahluf, L., Angele, P., Kon, E., and Verdonck, P., “Three-dimensional bone morphology is a risk factor for medial postmeniscectomy syndrome: A retrospective cohort study”, Journal of Experimental Orthopaedics, vol. 11, no. 3, p. e12090, 2024.
F. Sierra-Jerez, Valencia, Y., Giraldo, D., and Martínez, F., “Towards dopaminergic SPECT estimation from structural MRI sequences to characterize Parkinson’s disease”, in 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2024, pp. 1-4.
2023
Z. Bnoulkacem, Vlaminck, M., Morocho, G. Raimundo L., Zivariadab, H., Zahiri, Z., Koirala, B., Platisa, L., Luong, H., Scheunders, P., Mangialetto, F., and Bufi, I., “Corrosion detection using hyperspectral VNIR and SWIR imaging for drone-based inspection of electrical pylons”, in EUROCORR 2023, European Corrosion Congress, Proceedings, 2023, p. 2.PDF icon exhibit_17_corrosion_detection_using_hyperspectral_vnir_and_swir_imaging.pdf (138.17 KB)
Z. Bnoulkacem, Vlaminck, M., Morocho, G. Raimundo L., Zivariadab, H., Zahiri, Z., Koirala, B., Platisa, L., Luong, H., Scheunders, P., Mangialetto, F., and Bufi, I., “Corrosion detection using hyperspectral VNIR and SWIR imaging for drone-based inspection of electrical pylons”, in EUROCORR 2023, European Corrosion Congress, Proceedings, 2023, p. 2.PDF icon exhibit_17_corrosion_detection_using_hyperspectral_vnir_and_swir_imaging.pdf (138.17 KB)
M. Vlaminck, Bnoulkacem, Z., Luzardo, G., Zivariadab, H., Zahiri, Z., Koirala, B., Mangialetto, F., Bufi, I., Platisa, L., Jayapala, M., Scheunders, P., and Luong, H., “Drone-Based Corrosion Detection on High-Voltage Transmission Towers Using Hyperspectral Imaging”, in 2023 13th Workshop on Hyperspectral Imaging and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2023, pp. 1-5.PDF icon whispers2023.pdf (10.52 MB)
B. Koirala, Rasti, B., Bnoulkacem, Z., Ribeiro, A. De Lima, Madriz, Y., Herrmann, E., Gestels, A., De Kerf, T., Janssens, K., Steenackers, G., Gloaguen, R., and Scheunders, P., “An Extensive Multisensor Hyperspectral Benchmark Datasets of Intimate Mixtures of Mineral Powders”, in IEEE International Geoscience and Remote Sensing Symposium, 2023, pp. 5890-5893.PDF icon igarss_2022_1.pdf (1001.3 KB)
J. Merckx, Sijbers, J., and De Beenhouwer, J., “Fitting a 2D mesh to X-ray measurements”, in 17th International Meeting on Fully 3D Image Reconstruction in Radiology and Nuclear Medicine, Stony Brook, 2023.

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