Publications

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2022
V. Anania, Collier, Q., Veraart, J., Buikema, A. Eline, Vanhevel, F., Billiet, T., Jeurissen, B., den Dekker, A. J., and Sijbers, J., “Improved diffusion parameter estimation by incorporating T2 relaxation properties into the DKI-FWE model”, NeuroImage, vol. 256, p. 119219, 2022.
M. Shahrimie Asaari, Mertens, S., Verbraeken, L., Dhondt, S., Inze, D., Koirala, B., and Scheunders, P., “Non-Destructive Analysis of Plant Physiological Traits Using Hyperspectral Imaging: A Case Study on Drought Stress”, Computers and Electronics in Agriculture, vol. 195, no. 106806, 2022.PDF icon 1-s2.0-s0168169922001235-main.pdf (5.53 MB)
M. Shahrimie Asaari, Mertens, S., Verbraeken, L., Dhondt, S., Inze, D., Bikram, K., and Scheunders, P., “Non-destructive analysis of plant physiological traits using hyperspectral imaging: A case study on drought stress”, Computers and Electronics in Agriculture, vol. 195, p. 106806, 2022.PDF icon non-destructive_analysis_of_plant_physiological_traits_using_hyperspectral.pdf (5.53 MB)
2021
M. Naeyaert, Aelterman, J., Golkov, V., Cremers, D., Pizurica, A., Sijbers, J., and Verhoye, M., “Accelerating in vivo fast spin echo high angular resolution diffusion imaging with an isotropic resolution in mice through compressed sensing”, Magnetic Resonance in Medicine, vol. 85, no. 3, pp. 1397-1413, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
2020
M. Roshani, Sattari, M. Amir, Ali, P. Jammal Muh, Roshani, G. Hossein, Corniani, E., and Nazemi, E., “Application of GMDH neural network technique to improve measuring precision of a simplified photon attenuation based two-phase flowmeter”, Flow Measurement and Instrumentation, vol. 75, 2020.
P. Bladt, den Dekker, A. J., Clement, P., Achten, E., and Sijbers, J., “The costs and benefits of estimating T1 of tissue alongside cerebral blood flow and arterial transit time in pseudo-continuous arterial spin labeling”, NMR in Biomedicine, vol. 33, no. 12, pp. 1-17, 2020.PDF icon Download paper (16.44 MB)
B. Auer, Kalluri, K., De Beenhouwer, J., Zeraatkar, N., Momsen, N., Kuo, P. H., Furenlid, L. R., and King, M. A., “Keel-Edge Height Selection for Improved Multi-Pinhole 123I Brain SPECT Imaging”, Journal of Nuclear Medicine, vol. 61, p. 573, 2020.PDF icon Download paper (127.73 KB)
B. Auer, Kalluri, K., De Beenhouwer, J., Doty, K., Zeraatkar, N., Kuo, P. H., Furenlid, L. R., and King, M. A., “Reconstruction using Depth of Interaction Information of Curved and Flat Detector Designs for Quantitative Multi-Pinhole Brain SPECT”, Journal of Nuclear Medicine, vol. 61, p. 103, 2020.PDF icon snm2020_recon_curved.pdf (103.23 KB)
P. Bladt, van Osch, M. J. P., Clement, P., Achten, E., Sijbers, J., and den Dekker, A. J., “Supporting measurements or more averages? How to quantify cerebral blood flow most reliably in 5 minutes by arterial spin labeling”, Magnetic Resonance in Medicine, vol. 84, no. 5, pp. 2523-2536, 2020.PDF icon Download paper (1.3 MB)
2019
M. Shahrimie Asaari, Mertens, S., Dhondt, S., Inze, D., Wuyts, N., and Scheunders, P., “Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform”, Computers and Electronics in Agriculture, vol. 162, pp. 749-758, 2019.PDF icon shahrimie_2019.pdf (3.12 MB)
V. Andrejchenko, Liao, W., Philips, W., and Scheunders, P., “Decision Fusion Framework for Hyperspectral Image Classification Based on Markov and Conditional Random Fields”, Remote Sensing, vol. 11, 2019.PDF icon remotesensing-11-00624.pdf (1.5 MB)
J. Sanctorum, Adriaens, D., Dirckx, J. J. J., Sijbers, J., Van Ginneken, C., Aerts, P., and Van Wassenbergh, S., “Methods for characterization and optimisation of measuring performance of stereoscopic x-ray systems with image intensifiers”, Measurement Science and Technology, vol. 30, no. 10, 2019.
J. Sanctorum, Adriaens, D., Dirckx, J. J. J., Sijbers, J., Van Ginneken, C., Aerts, P., and Van Wassenbergh, S., “Methods for characterization and optimisation of measuring performance of stereoscopic x-ray systems with image intensifiers”, Measurement Science and Technology, vol. 30, no. 10, 2019.
R. Heylen, Andrejchenko, V., Zahiri, Z., Parente, M., and Scheunders, P., “Nonlinear hyperspectral unmixing with graphical models”, IEEE Transaction on Geoscience and Remote Sensing, vol. 57, no. 7, pp. 4844-4856, 2019.PDF icon published.pdf (3.15 MB)
A. Könik, Auer, B., De Beenhouwer, J., Kalluri, K., Zeraatkar, N., Furenlid, L. R., and King, M. A., “Primary, scatter, and penetration characterizations of parallel-hole and pinhole collimators for I-123 SPECT”, Physics in Medicine & Biology, vol. 64, no. 24, p. 245001, 2019.PDF icon i123_spectra_final_revision_11_7_19.pdf (7.63 MB)
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Philips, W., Sijbers, J., and Leemans, A., “Reproducibility and intercorrelation of graph theoretical measures in structural brain connectivity networks”, Medical Image Analysis, vol. 52, pp. 56-67, 2019.PDF icon Download paper (4.03 MB)
2018
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rühl, M., Rumshiskaya, A., Nosikova, I., Litvinova, L., Annen, J., Pechenkova, E. V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., “Brain Tissue–Volume Changes in Cosmonauts”, New England Journal of Medicine, vol. 379, no. 17, pp. 1678 - 1680, 2018.
M. Shahrimie Asaari, Mishra, P., Mertens, S., Dhondt, S., Inze, D., Wuyts, N., and Scheunders, P., “Close-range hyperspectral image analysis for the early detection of plant stress responses in individual plants in a high-throughput phenotyping platform”, ISPRS Journal of Photogrammetry and Remote Sensing , vol. 138, pp. 121-138, 2018.
H. Aerts, Schirner, M., Jeurissen, B., Van Roost, D., Achten, E., Ritter, P., and Marinazzo, D., “Modeling brain dynamics in brain tumor patients using The Virtual Brain”, eNeuro, 2018.
H. Aerts, Schirner, M., Jeurissen, B., Van Roost, D., Achten, E., Ritter, P., and Marinazzo, D., “Modeling brain dynamics in brain tumor patients using The Virtual Brain”, eNeuro, 2018.

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