Publications

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2018
J. Goyens, Vasilopoulou-Kampitsi, M., Claes, R., Sijbers, J., and Mancini, L., “Enhanced contrast in X-ray microtomographic images of the membranous labyrinth using different X-ray sources and scanning modes”, Journal of Anatomy, vol. 233, p. 770--782, 2018.PDF icon Download paper (1.44 MB)
B. Rasti, Scheunders, P., Ghesami, P., Licciardi, G., and Chanussot, J., “Noise reduction in hyperspectral imagery: overview and application”, Remote Sensing , vol. 10, no. 3, p. 482, 2018.
G. Liu, Nath, T., Guo, Z., Linneweber, G., Claeys, A., Li, J., Bengochea, M., De Backer, S., Weyn, B., Sneyders, M., Nicasy, H., Yu, P., Scheunders, P., and Hassan, B., “A simple computer vision pipeline reveals the effects of isolation on social interaction dynamics in Drosophila”, Plos Computational Biology, vol. 14, no. 8, p. e1006410, 2018.
F. De Carlo, Gursoy, D., Ching, D., Batenburg, K. J., Ludwig, W., Mancini, L., Welford, F. M., Mokso, R., Pelt, D., Sijbers, J., and Rivers, M., “TomoBank: A Tomographic Data Repository for Computational X-ray Science”, Measurement Science and Technology, vol. 29, no. 3, pp. 1-10, 2018.PDF icon Download paper (5.71 MB)
H. Zivari Adab, Chalavi, S., Beets, I., Gooijers, J., Leunissen, I., Cheval, B., Collier, Q., Sijbers, J., Jeurissen, B., Swinnen, S. P., and Boisgontier, M., “White matter microstructural organization of interhemispheric pathways predicts different stages of bimanual coordination learning in young and older adults”, European Journal of Neuroscience , vol. 47, no. 5, pp. 446–459, 2018.
2017
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., “Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question”, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
E. K. Ghasrodashti, Karami, A., Heylen, R., and Scheunders, P., “Spatial Resolution Enhancement of Hyperspectral Images Using Spectral Unmixing and Bayesian Sparse Representation”, Remote Sensing, vol. 9, no. 6, 2017.
2016
W. Guo, Hung, C. - C., Scheunders, P., Kuo, B. - C., Lan, Y., and Ma, Z., “Advanced techniques for computational and information sciences”, Mathematical Problems in Engineering, vol. 2016, 2016.
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., “Detecting and locating light atoms from high-resolution STEM images: the quest for a single optimal design Ultramicroscopy”, Ultramicroscopy, vol. 170, pp. 128-138, 2016.
C. Guglielmetti, Veraart, J., Roelant, E., Mai, Z., Daans, J., Van Audekerke, J., Naeyaert, M., Vanhoutte, G., Delgado Y Palacios, R., Praet, J., Fieremans, E., Ponsaerts, P., Sijbers, J., Van Der Linden, A., and Verhoye, M., “Diffusion kurtosis imaging probes cortical alterations and white matter pathology following cuprizone-induced demyelination and spontaneous remyelination”, NeuroImage, vol. 125, pp. 363–377, 2016.
R. Heylen, Zare, A., Gader, P., and Scheunders, P., “Hyperspectral unmixing with endmember variability via alternating angle minimization”, IEEE Transactions on Geoscience and Remote Sensing, vol. 54, no. 8, pp. 4983-4993, 2016.
D. Pelt, Gursoy, D., Palenstijn, W. J., Sijbers, J., De Carlo, F., and Batenburg, K. J., “Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data”, Journal of Synchrotron Radiation, vol. 23, pp. 842-849, 2016.
2015
B. Goris, De Beenhouwer, J., De Backer, A., Zanaga, D., Batenburg, K. J., Sánchez-Iglesias, A., Liz-Marzán, L. M., Van Aert, S., Bals, S., Sijbers, J., and Van Tendeloo, G., “Measuring Lattice Strain in Three Dimensions through Electron Microscopy”, Nano Letters, vol. 15, no. 10, pp. 6996–7001, 2015.
S. Cools, Ghysels, P., Van Aarle, W., Sijbers, J., and Vanroose, W., “A multi-level preconditioned Krylov method for the efficient solution of algebraic tomographic reconstruction problems”, Journal of Computational and Applied Mathematics, vol. 238, no. 1, pp. 1-16, 2015.
R. Heylen, Scheunders, P., Gader, P., and Rangarajan, A., “Nonlinear unmixing by using different metrics in a linear unmixing chain”, IEEE-JSTARS, Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 2015.
2014
A. Bernat, Huysmans, T., Van Glabbeek, F., Sijbers, J., Gielen, J., and Van Tongel, A., “The anatomy of the clavicle: A Three-dimensional Cadaveric Study”, Clinical anatomy, vol. 27, no. 5, pp. 712–723, 2014.PDF icon Download paper (554.93 KB)
J. Gonnissen, De Backer, A., den Dekker, A. J., Martinez, G. T., Rosenauer, A., Sijbers, J., and Van Aert, S., “Optimal experimental design for the detection of light atoms from high-resolution scanning transmission electron microscopy images”, Applied Physics Letters, vol. 105, no. 063116, 2014.
2013
B. Goris, Roelandts, T., Batenburg, K. J., Heidari Mezerji, H., and Bals, S., “Advanced reconstruction algorithms for electron tomography: from comparison to combination”, Ultramicroscopy, vol. 127, pp. 40–47, 2013.
P. Reischig, King, A., Nervo, L., Viganó, N., Guilhem, Y., Palenstijn, W. J., Batenburg, K. J., Preuss, M., and Ludwig, W., “Advances in X-ray diffraction contrast tomography: flexibility in the setup geometry and application to multiphase materials”, Journal of Applied Crystallography, vol. 46, no. 2, pp. 297 - 311, 2013.
D. Burazerovic, Geens, B., Heylen, R., Sterckx, S., and Scheunders, P., “Detecting the adjacency effect in hyperspectral imagery with spectral unmixing techniques”, IEEE JSTARS, Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 6, no. 3, pp. 1070-1078, 2013.
G. Vanhoutte, Pereson, S., Delgado Y Palacios, R., Guns, P. - J., Asselbergh, B., Veraart, J., Sijbers, J., Verhoye, M., Van Broeckhoven, C., and Van Der Linden, A., “Diffusion kurtosis imaging to detect amyloidosis in an APP/PS1 mouse model for Alzheimer's disease”, Magnetic Resonance in Medicine, vol. 69, no. 4, pp. 1115–1121, 2013.
A. J. den Dekker, Gonnissen, J., De Backer, A., Sijbers, J., and Van Aert, S., “Estimation of unknown structure parameters from high-resolution (S)TEM images: what are the limits?”, Ultramicroscopy, vol. 134, pp. 34-43, 2013.
S. Sekar, Jonckers, E., Verhoye, M., Willems, R., Veraart, J., Van Audekerke, J., Couto, J., Giugliano, M., Wuyts, K., Dedeurwaerdere, S., Sijbers, J., Mackie, C., Ver Donck, L., Steckler, T., and Van Der Linden, A., “Subchronic memantine induced concurrent functional disconnectivity and altered ultra-structural tissue integrity in the rodent brain: revealed by multimodal MRI.”, Psychopharmacology, vol. 227, no. 3, pp. 479-91, 2013.
2012
N. Van Camp, Blockx, I., Camon, L., de Vera, N., Verhoye, M., Veraart, J., Van Hecke, W., Martinez, E., Guadelupe, S., Sijbers, J., Planas, A., and Van Der Linden, A., “A complementary DTI-histological study in a model of Huntingtons disease”, Neurobiology of Aging, vol. 33, pp. 945-959, 2012.
S. Van Cauter, Veraart, J., Sijbers, J., Peeters, R. R., Himmelreich, U., Gool, V. S., Van Calenbergh, F., De Vleeschouwer, S., Van Hecke, W., and Sunaert, S., “Diffusion kurtosis imaging in the grading of gliomas”, Radiology, vol. 2, pp. 492-501, 2012.

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