Publications

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Journal Article
D. Kazantsev, Thompson, W. M., Lionheart, W. R. B., Van Eyndhoven, G., Kaestner, A. P., Dobson, K. J., Withers, P. J., and Lee, P. D., 4D-CT reconstruction with unified spatial-temporal patch-based regularization, Inverse Problems and Imaging, vol. 9, no. 2, pp. 447-467, 2015.
E. Pechenkova, Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., Mershina, E., Sinitsyn, V., Van Ombergen, A., Jeurissen, B., Jillings, S., Laureys, S., Sijbers, J., Grishin, A., Chernikova, L., Naumov, I., Kornilova, L., Wuyts, F. L., Tomilovskaya, E., and Kozlovskaya, I., Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI., Front Physiol, vol. 10, p. 761, 2019.
A. Van Ombergen, Heine, L., Jillings, S., Roberts, E., Jeurissen, B., Van Rompaey, V., Mucci, V., Vanhecke, S., Sijbers, J., Vanhevel, F., Sunaert, S., Bahri, M. Ali, Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., Altered functional brain connectivity in patients with visually induced dizziness, NeuroImage: Clinical, vol. 14, pp. 538–545, 2017.
M. Shahrimie Asaari, Mertens, S., Dhondt, S., Inze, D., Wuyts, N., and Scheunders, P., Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform, Computers and Electronics in Agriculture, vol. 162, pp. 749-758, 2019.
B. Weyn, Van de Wouwer, G., Van Daele, A., Scheunders, P., Van Dyck, D., Van Marck, E., and Jacob, W., Automated breast tumour diagnosis and grading based on wavelet chromatin texture description, Cytometry, vol. 33, pp. 32-40, 1998.
G. Van de Wouwer, Weyn, B., Scheunders, P., Jacob, W., Van Marck, E., and Van Dyck, D., Automated chromatin-texture based diagnosis of carcinoma nuclei, Journal of Microscopy, vol. 197, pp. 25-35, 2000.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rühl, M., Rumshiskaya, A., Nosikova, I., Litvinova, L., Annen, J., Pechenkova, E. V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain Tissue–Volume Changes in Cosmonauts, New England Journal of Medicine, vol. 379, no. 17, pp. 1678 - 1680, 2018.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rumshiskaya, A., Litvinova, L., Nosikova, I., Pechenkova, E. V., Rukavishnikov, I., Manko, O., Danylichev, S., R. Rühl, M., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain ventricular volume changes induced by long-duration spaceflight, Proceedings of the National Academy of Sciences, vol. 116, no. 21, pp. 10531-10536, 2019.
W. R. Crum, Danckaers, F., Huysmans, T., Cotel, M. - C., Natesan, S., Modo, M. M., Sijbers, J., Williams, S. C. R., Kapur, S., and Vernon, A. C., Chronic exposure to haloperidol and olanzapine leads to common and divergent shape changes in the rat hippocampus in the absence of grey-matter volume loss, Psychological Medicine, vol. 46, no. 15, pp. 3081-3093, 2016.
S. Livens, Scheunders, P., Van de Wouwer, G., Van Dyck, D., Smets, H., Winkelmans, J., and Bogaerts, W., Classification of corrosion images by wavelet signatures and LVQ networks, Lecture Notes in Computer Science, vol. 970, pp. 538-543, 1995.
M. Shahrimie Asaari, Mishra, P., Mertens, S., Dhondt, S., Inze, D., Wuyts, N., and Scheunders, P., Close-range hyperspectral image analysis for the early detection of plant stress responses in individual plants in a high-throughput phenotyping platform, ISPRS Journal of Photogrammetry and Remote Sensing , vol. 138, pp. 121-138, 2018.
B. Weyn, Van de Wouwer, G., Samir, G. K., Van Daele, A., Scheunders, P., Van Marck, E., and Jacob, W., Computer-assisted differential diagnosis of malignant mesothelioma based on syntactic structure analysis, Cytometry, vol. 35, pp. 23-29, 1999.
P. Scheunders, De Clerck, N., and Wille, J., Computerized image storage and analysis of contracting cardiac myocytes, Journal of Computer Assisted Microscopy, vol. 6, pp. 77-83, 1994.
A. Demertzi, Van Ombergen, A., Tomilovskaya, E., Jeurissen, B., Pechenkova, E. V., Di Perri, C., Litvinova, L., Amico, E., Rumshiskaya, A., Rukavishnikov, I., Sijbers, J., Sinitsyn, V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., Cortical reorganization in an astronaut’s brain after long-duration spaceflight, Brain Structure and Function, vol. 221, no. 5, pp. 2873–2876, 2016.PDF icon Download paper (820.49 KB)
H. Struyfs, Van Hecke, W., Veraart, J., Sijbers, J., Slaets, S., De Belder, M., Wuyts, L., Peters, B., Sleegers, K., Robberecht, C., Van Broeckhoven, C., De Belder, F., Parizel, P. M., and Engelborghs, S., Diffusion Kurtosis Imaging: a possible MRI biomarker for AD diagnosis?, Journal of Alzheimer’s Disease, vol. 48, pp. 937-948, 2015.PDF icon Download paper (374.95 KB)
A. Van Ombergen, Demertzi, A., Tomilovskaya, E., Jeurissen, B., Sijbers, J., Kozlovskaya, I. B., Parizel, P. M., Van de Heyning, P. H., Sunaert, S., Laureys, S. S. L., and Wuyts, F. L., The effect of spaceflight and microgravity on the human brain, Journal of Neurology, vol. 246, no. 1, pp. 18-22, 2017.
D. Kazantsev, Van Eyndhoven, G., Lionheart, W. R. B., Withers, P. J., Dobson, K. J., McDonald, S. A., Atwood, R., and Lee, P. D., Employing temporal self-similarity across the entire time domain in computed tomography reconstruction, Philosophical Transactions of the Royal Society of London A: Mathematical, Physical and Engineering Sciences, vol. 373, 2015.
G. Wolf and Scheunders, P., Evaluation of the swimming activity of Daphnia magna by image analysis after administration of sublethal Cadmium concentrations, Comparative Biochemistry and Physiology A, vol. 120, pp. 99-105, 1998.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., Extraction of airways from CT (EXACT'09)., IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., Extraction of airways from CT (EXACT'09)., IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., Improved sensitivity to cerebral white matter abnormalities in Alzheimer's disease with spherical deconvolution based tractography., PloS one, vol. 7, no. 8, p. e44074, 2012.
A. Van Ombergen, Wuyts, F. L., Jeurissen, B., Sijbers, J., Vanhevel, F., Jillings, S., Parizel, P. M., Sunaert, S., Van de Heyning, P. H., Dousset, V., Laureys, S. S. L., and Demertzi, A., Intrinsic connectivity reduces in vestibular-related regions after first-time exposure to short-term gravitational alterations, Scientific Reports, vol. 7, no. 3061, 2017.PDF icon Download paper (3.47 MB)
E. Fransen, Dhooghe, R., Van Camp, G., Verhoye, M., Sijbers, J., Reyniers, E., Soriano, P., Kamiguchi, H., Willemsen, R., Koekoek, K. E., Zeeuw, D. C. I., De Deyn, P. P., Van Der Linden, A., Lemmon, V., Kooy, R. F., and Willems, P. J., L1 knockout mice show dilated ventricles, vermis hypoplasia and impaired exploration patterns, Human Molecular Genetics, vol. 7, pp. 999-1009, 1998.PDF icon Download paper (248.02 KB)
E. Fransen, Dhooghe, R., Van Camp, G., Verhoye, M., Sijbers, J., Reyniers, E., Soriano, P., Kamiguchi, H., Willemsen, R., Koekoek, K. E., Zeeuw, D. C. I., De Deyn, P. P., Van Der Linden, A., Lemmon, V., Kooy, R. F., and Willems, P. J., L1 knockout mice show dilated ventricles, vermis hypoplasia and impaired exploration patterns, Human Molecular Genetics, vol. 7, pp. 999-1009, 1998.PDF icon Download paper (248.02 KB)
R. Delgado Y Palacios, Adriaan, C., Kim, H., Verhoye, M., Poot, D. H. J., Jouke, D., Van Audekerke, J., Benveniste, H., Sijbers, J., Wiborg, O., and Van Der Linden, A., Magnetic resonance imaging and spectroscopy reveal differential hippocampal changes in anhedonic and resilient subtypes of the chronic mild stress rat model, Biological psychiatry, vol. 70, pp. 449-457, 2011.

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