Publications
“A geometric unmixing concept for the selection of optimal binary endmember combinations”, IEEE Geoscience and Remote Sensing letters, vol. 12, pp. 82-86, 2015.
, “MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation.”, Neuroimage, p. 116137, 2019.
, “Cluster size diversity, percolation, and complex systems”, Physical Review E, vol. 60, pp. 2684-2698, 1999.
, “Pattern Recognition and Complex Systems”, University of Antwerp, Antwerp, 2000.
, “Image processing using neighbourhood coding”, Pattern Recognition Letters, vol. 20, pp. 1279-1286, 1999.
, “Pattern Recognition using neighborhood coding”, in Proc. CVPRIP'98, Intern. Workshop on Computer Vision, Pattern Recognition and Image Processing , North Carolina, october 23-28, 1998, pp. 250-253.
, “Pattern Recognition, Neighborhood Codes, and Lattice Animals”, University of Antwerp, Antwerp, 2000.
, “Scaling and critical probability for cluster size and lattice animals diversity on randomly occupied square lattices”, Journal of Physics A: Mathematical and General, vol. 33, pp. 2739-2754, 2000.
, “Discrete tomographic reconstruction from deliberately motion blurred X-ray projections”, in 6th Conference on Industrial Computed Tomography, Wels, Austria, 2016, pp. 1-6. Download paper (444.66 KB)
, “A 3-dimensional discrete tomography approach for superresolution micro-CT images: application to foams”, in The first international conference on image formation in X-ray computed tomography, 2010, pp. 45-48. Download full paper (816.87 KB)
, “Threshold Selection for Segmentation of Dense Objects in Tomograms”, in International Symposium on Visual Computing, Berlin Heidelberg, 2008, vol. 5358, pp. 700-709.
, “Tomographic segmentation and discrete tomography for quantitative analysis of transmission tomography data”, University of Antwerp, Antwerp, Belgium, 2012. Download PhD thesis (39.16 MB)
, “Super-resolution for computed tomography based on discrete tomography”, IEEE Transactions on Image Processing, vol. 23, no. 3, pp. 1181 - 1193, 2014. Download paper (2.24 MB)
, “Memory access optimization for iterative tomography on many-core architectures”, in The 12th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2013, pp. 364-367. fully3d_wvaarle.pdf (2.8 MB)
, “Optimal threshold selection for segmentation of dense homogeneous objects in tomographic reconstructions”, IEEE Transactions on Medical Imaging, vol. 30, pp. 980-989, 2011. Download paper (1.59 MB)
, “Computed tomography on all scales using the ASTRA toolbox”, Liege Image Days 2008: Medical Imaging. 2008. wvaarle_poster.pdf (610.59 KB)
, “The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography”, Ultramicroscopy, vol. 157, pp. 35–47, 2015. Download paper (3.47 MB)
, “Efficient parameter estimation for discrete tomography using adaptive modeling”, in 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2011. Download full paper (853.19 KB)
, “Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART)”, IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4608-4621, 2012. Download paper (3.91 MB)
, “Fast and Flexible X-ray Tomography Using the ASTRA Toolbox”, Optics Express, vol. 24, pp. 25129-25147, 2016. Download paper (8.34 MB)
, “An accurate projection model for diffraction image formation and inversion using a polychromatic cone beam”, Journal of Applied Crystallography, vol. 48, pp. 334-343, 2015.
, “3D Atomic Scale Quantification of Nanostructures and their Dynamics Using Model-based STEM”, Microscopy & Microanalysis 2020 (online), Milwaukee, United States. 2020.
, “Quantifying 3D atomic structures of nanomaterials and their dynamics using model-based scanning transmission electron microscopy”, Spring Meeting of the EMRS, Nice, France. 2019.
, “Strategies for quantifying 3D atomic structures of nanomaterials and their dynamics using dose-efficient ADF STEM”, PICO2019, Vaalsbroek, The Netherlands. 2019.
, “Strategies for quantifying the 3D atomic structure and the dynamics of nanomaterials using model-based STEM”, Virtual MRS Spring/ Fall Meeting, Boston, United States (online). 2020.
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