Publications

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2013
T. Nath, Liu, G., Weyn, B., Hassan, B., De Backer, S., and Scheunders, P., “Tracking for Quantifying Social Network of Drosophila Melanogaster”, in 15th Computer Analysis of Images and Patterns (CAIP), 2013, vol. 8048, pp. 539–545.
2012
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., “Improved sensitivity to cerebral white matter abnormalities in Alzheimer's disease with spherical deconvolution based tractography.”, PloS one, vol. 7, no. 8, p. e44074, 2012.
B. de Smit, McClure, M., Palenstijn, W. J., Sparling, I. E., and Wagon, S., “Through the Looking-Glass, and What the Quadratic Camera Found There”, The Mathematical Intelligencer, vol. 34, no. 3, pp. 30 - 34, 2012.
2011
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., “Constrained spherical deconvolution based tractography and cognition in Alzheimer’s disease”, International Conference on Alzheimer’s Disease. Paris, France, 2011.
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., “Constrained spherical deconvolution based tractography and cognition in Alzheimer’s disease”, Congress of the International Society for Vascular, Cognitive and Behavioural Disorders, vol. 5. Lille, France, 2011.
Y. D. Reijmer, Leemans, A., Heringa, S. M., Wielaard, I., Jeurissen, B., Koek, H. L., and Biessels, G. J., “Constrained spherical deconvolution based tractography and cognition in Alzheimer’s disease”, Human Brain Mapping. Québec, Canada, 2011.
I. Wielaard, Reijmer, Y. D., Leemans, A., Heringa, S. M., Jeurissen, B., Koek, H. L., and Biessels, G. J., “Diffusion tensor imaging and cognition in Alzheimer’s disease: the influence of crossing fibers”, Endo-Neuro Psycho Meeting. Lunteren, The Netherlands, 2011.
R. Delgado Y Palacios, Adriaan, C., Kim, H., Verhoye, M., Poot, D. H. J., Jouke, D., Van Audekerke, J., Benveniste, H., Sijbers, J., Wiborg, O., and Van Der Linden, A., “Magnetic resonance imaging and spectroscopy reveal differential hippocampal changes in anhedonic and resilient subtypes of the chronic mild stress rat model”, Biological psychiatry, vol. 70, pp. 449-457, 2011.
2010
G. Perfetti, Van de Casteele, E., Rieger, B., Wildeboer, W. J., and Meesters, G. M. H., “X-ray micro tomography and image analysis as complementary methods for morphological characterization and coating thickness measurement of coated particles”, Advanced Powder Technology, vol. 21, no. 6, pp. 663 - 675, 2010.
2009
R. Delgado Y Palacios, Verhoye, M., Van Audekerke, J., Poot, D. H. J., Sijbers, J., Wiborg, O., and Van Der Linden, A., “DKI visualizes hippocampal alterations in the chronic mild stress ratmodel”, ISMRM conference proceedings, vol. 2009. p. 744, 2009.
S. van der Maar, Batenburg, K. J., and Sijbers, J., “Experiences with Cell-BE and GPU for tomography”, in Embedded COmputer Systems: Architectures, Modeling, and Simulation - 9th International Workshop, SAMOS 2009 - Proceedings, 2009, pp. 298-307.
2007
A. Leemans, Van Hecke, W., Lebel, C., Walker, L., Sijbers, J., and Beaulieu, C., “A model based approach for voxelwise analysis of multi-subject diffusion tensor data”, in Joint Annual Meeting ISMRM-ESMRMB, Berlin, 2007.
2005
J. Juntu, Sijbers, J., Van Dyck, D., and Gielen, J. L., “Bias Field Correction for MRI Images”, in Proceedings of the 4th International Conference on Computer Recognition Systems (CORES05), Rydzyna Castle, Poland, 2005, pp. 543-551.
2004
A. J. den Dekker and Sijbers, J., “Detection of brain activation from magnitude fMRI data using a generalized likelihood ratio test”, in Proceedings of the 12th European Signal Processing Conference, Vienna, Austria, 2004, pp. 233-236.
2003
J. H. Waarsing, Leemans, A., Day, J., Ederveen, A. G. H., Van Dyck, D., Buelens, E., De Clerck, N., Sasov, A., and Weinans, H., “Effects of Growth and OVX in the Tibia of Individual Rats: an in-vivo Micro-CT Study”, in 49th Annual Meeting - Orthopaedic Research Society, New Orleans, LA, USA, 2003.
J. H. Waarsing, Leemans, A., Day, J., Ederveen, A. G. H., Van Dyck, D., Buelens, E., De Clerck, N., Sasov, A., and Weinans, H., “Effects of Growth and OVX in the Tibia of Individual Rats: an in-vivo Micro-CT Study”, in 49th Annual Meeting - Orthopaedic Research Society, New Orleans, LA, USA, 2003.
2000
G. Van de Wouwer, Weyn, B., Scheunders, P., Jacob, W., Van Marck, E., and Van Dyck, D., “Automated chromatin-texture based diagnosis of carcinoma nuclei”, Journal of Microscopy, vol. 197, pp. 25-35, 2000.
B. Weyn, Tjalam, W., Van de Wouwer, G., Van Daele, A., Scheunders, P., Jacob, W., Van Marck, E., and Van Dyck, D., “Validation of nuclear texture density, morphometry and tissue syntactic structure analysis as prognosticators of cervical carcinoma”, Analytical and Quantitative Cytology and Histology, vol. 22, pp. 373-382, 2000.
1999
B. Weyn, Van de Wouwer, G., Samir, G. K., Van Daele, A., Scheunders, P., Van Marck, E., and Jacob, W., “Computer-assisted differential diagnosis of malignant mesothelioma based on syntactic structure analysis”, Cytometry, vol. 35, pp. 23-29, 1999.
M. Verhoye, Sijbers, J., Fransen, E., Kooy, R. F., Soriano, P., Willems, P. J., and Van Der Linden, A., “In vivo neuro MRI microscopy of L1 knockout mice demonstrated similarities with human crash syndrome”, in Belgian Society for Neuroscience, Brussels, 1999.
R. F. Kooy, Reyniers, E., Verhoye, M., Sijbers, J., Cras, P., Oostra, B. A., Willems, P. J., and Van Der Linden, A., “Neuroanatomy of the fragile X knockout mouse brain studied using in vivo high resolution Magnetic Resonance Imaging (MRI)”, European Journal of Human Genetics, vol. 7, pp. 526-532, 1999.PDF icon ejhg99.pdf (261.08 KB)
B. Weyn, Van de Wouwer, G., Koprowski, M., Van Daele, A., Dhaene, K., Scheunders, P., Jacob, W., and Van Marck, E., “Value of morphometry, texture analysis, densitometry and histometry in the differential diagnosis and prognosis of malignant mesothelioma”, Journal of Pathology, vol. 4, pp. 581-589, 1999.
1998
B. Weyn, Van de Wouwer, G., Van Daele, A., Scheunders, P., Van Dyck, D., Van Marck, E., and Jacob, W., “Automated breast tumour diagnosis and grading based on wavelet chromatin texture description”, Cytometry, vol. 33, pp. 32-40, 1998.

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