Publications

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1997
E. Bettens, Scheunders, P., Van Dyck, D., Moens, L., and Osta, V. P., “Computer Analysis of Two-Dimensional Electrophoresis Gels : A New Segmentation and Modeling Algorithm”, Electrophoresis, vol. 18, pp. 792-798, 1997.
1999
J. Sijbers, Michiels, I., Verhoye, M., Van Audekerke, J., Van Der Linden, A., and Van Dyck, D., “Restoration of MR induced artifacts in simultaneously recorded MR/EEG data”, Magnetic Resonance Imaging, vol. 17, pp. 1383-1393, 1999.PDF icon Download paper (1.09 MB)
2007
Z. Mai, Huysmans, T., and Sijbers, J., “Colon Visualization Using Cylindrical Parameterization”, Lecture Notes in Computer Science, vol. 4678, pp. 607-615, 2007.PDF icon Full text (1.44 MB)
A. Smolders, Martino, D. F., Staeren, N., Scheunders, P., Sijbers, J., Goebel, R., and Formisano, E., “Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis”, Magnetic Resonance Imaging, vol. 25, pp. 860-868, 2007.PDF icon Download paper (658.36 KB)
2008
W. Van Hecke, Sijbers, J., D'Agostino, E., Maes, F., De Backer, S., Vandervliet, E., Parizel, P. M., and Leemans, A., “On the construction of an inter-subject diffusion tensor magnetic resonance atlas of the healthy human brain”, NeuroImage, vol. 43, pp. 69-80, 2008.PDF icon Download paper (3.34 MB)
P. Kempeneers, Zarco-Tejada, P. J., North, P. R. J., De Backer, S., Delalieux, S., Sepulcre-Canto, G., Morales, F., van Aardt, J., Sagardoy, R., Coppin, P., and Scheunders, P., “Model inversion for chlorophyll estimation in open canopies from hyperspectral imagery”, International Journal of Remote Sensing, vol. 29, pp. 5093-5111, 2008.
S. De Backer, Cornelissen, F., Lemeire, J., Nuydens, R., Meert, T., Schelkens, P., and Scheunders, P., “Mosiacing of Fibered Fluorescence Microscopy Video”, Lecture notes in Computer Science, vol. 5259, pp. 915-923, 2008.
2009
K. J. Batenburg, Bals, S., Sijbers, J., Kubel, C., Midgley, P. A., Hernandez, J. C., Kaiser, U., Encina, E. R., Coronado, E. A., and Van Tendeloo, G., “3D imaging of nanomaterials by discrete tomography”, Ultramicroscopy, vol. 109, pp. 730-740, 2009.
C. A. Sage, Van Hecke, W., Peeters, R. R., Sijbers, J., Robberecht, W., Parizel, P. M., Marchal, G., Leemans, A., and Sunaert, S., “Quantitative diffusion tensor imaging in amyotrophic lateral sclerosis: revisited.”, Human brain mapping, vol. 30, no. 11, pp. 3657-75, 2009.
2010
Z. Mai, Verhoye, M., Van Der Linden, A., and Sijbers, J., “Diffusion tensor image up-sampling: a registration-based approach”, Magnetic resonance Imaging, vol. 28, pp. 1497-1506, 2010.PDF icon Download paper (814.96 KB)
N. Van Camp, Vreys, R., Van Laere, K., Lauwers, E., Beque, D., Verhoye, M., Casteels, C., Verbruggen, A., Debyser, Z., Mortelmans, L., Sijbers, J., Nuyts, J., Baekelandt, V., and Van Der Linden, A., “Morphologic and functional changes in the unilateral 6-hydroxydopamine lesion rat model for Parkinson's disease discerned with microSPECT and quantitative MRI.”, Magnetic Resonance Materials in Physics, Biology and Medicine, vol. 23, no. 2, pp. 65-75, 2010.
2011
Z. Mai, Hanel, R., Batenburg, K. J., Verhoye, M., Scheunders, P., and Sijbers, J., “Bias field reduction by localized Lloyd-Max quantization”, Magnetic Resonance Imaging, vol. 29, no. 4, pp. 536-545, 2011.
Z. Mahmood and Scheunders, P., “Enhanced visualization of hyperspectral images”, IEEE Geoscience and Remote Sensing letters, vol. 8, pp. 869-873, 2011.
P. Fillard, Descoteaux, M., Goh, A., Gouttard, S., Jeurissen, B., Malcolm, J., Ramirez-Manzanares, A., Reisert, M., Sakaie, K., Tensaouti, F., Yo, T. - S., Mangin, J. - F., and Poupon, C., “Quantitative Evaluation of 10 Tractography Algorithms on a Realistic Diffusion MR Phantom”, NeuroImage, vol. 56, pp. 220-234, 2011.
P. Fillard, Descoteaux, M., Goh, A., Gouttard, S., Jeurissen, B., Malcolm, J., Ramirez-Manzanares, A., Reisert, M., Sakaie, K., Tensaouti, F., Yo, T. - S., Mangin, J. - F., and Poupon, C., “Quantitative Evaluation of 10 Tractography Algorithms on a Realistic Diffusion MR Phantom”, NeuroImage, vol. 56, pp. 220-234, 2011.
Z. Mai, Rajan, J., Verhoye, M., and Sijbers, J., “Robust edge-directed interpolation of magnetic resonance images”, Physics in medicine and biology, vol. 56, pp. 7287-7303, 2011.PDF icon Download paper (1.3 MB)
2012
N. Van Camp, Blockx, I., Camon, L., de Vera, N., Verhoye, M., Veraart, J., Van Hecke, W., Martinez, E., Guadelupe, S., Sijbers, J., Planas, A., and Van Der Linden, A., “A complementary DTI-histological study in a model of Huntingtons disease”, Neurobiology of Aging, vol. 33, pp. 945-959, 2012.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., “Extraction of airways from CT (EXACT'09).”, IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
G. Thoonen, Mahmood, Z., Peeters, S., and Scheunders, P., “Multisource classification of color and hyperspectral images using color attribute profiles and composite decision fusion”, Selected Topics in Applied Earth Observations and Remote Sensing, IEEE Journal of, vol. 5, pp. 510 - 521, 2012.
B. de Smit, McClure, M., Palenstijn, W. J., Sparling, I. E., and Wagon, S., “Through the Looking-Glass, and What the Quadratic Camera Found There”, The Mathematical Intelligencer, vol. 34, no. 3, pp. 30 - 34, 2012.
2013
Z. Mahmood, Akhter, M. A., Thoonen, G., and Scheunders, P., “Contextual Subpixel Mapping of Hyperspectral Images Making Use of a High Resolution Color Image”, IEEE JSTARS, Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 6, no. 2, pp. 779 - 791, 2013.
L. Emsell, Leemans, A., Langan, C., Van Hecke, W., Barker, G. J., McCarthy, P., Jeurissen, B., Sijbers, J., Sunaert, S., Cannon, D. M., and McDonald, C., “Limbic and callosal white matter changes in euthymic bipolar I disorder: an advanced diffusion MRI tractography study”, Biologicial Psychiatry, vol. 73, no. 2, pp. 194-201, 2013.
L. Emsell, Leemans, A., Langan, C., Van Hecke, W., Barker, G. J., McCarthy, P., Jeurissen, B., Sijbers, J., Sunaert, S., Cannon, D. M., and McDonald, C., “Limbic and callosal white matter changes in euthymic bipolar I disorder: an advanced diffusion MRI tractography study”, Biologicial Psychiatry, vol. 73, no. 2, pp. 194-201, 2013.
S. Sekar, Jonckers, E., Verhoye, M., Willems, R., Veraart, J., Van Audekerke, J., Couto, J., Giugliano, M., Wuyts, K., Dedeurwaerdere, S., Sijbers, J., Mackie, C., Ver Donck, L., Steckler, T., and Van Der Linden, A., “Subchronic memantine induced concurrent functional disconnectivity and altered ultra-structural tissue integrity in the rodent brain: revealed by multimodal MRI.”, Psychopharmacology, vol. 227, no. 3, pp. 479-91, 2013.

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