Publications
“3D imaging of nanomaterials by discrete tomography”, Ultramicroscopy, vol. 109, pp. 730-740, 2009.
, “Advanced electron crystallography through model-based imaging”, IUCrJ, vol. 3, 2016.
, “Advanced techniques for computational and information sciences”, Mathematical Problems in Engineering, vol. 2016, 2016.
, “Advanced X-ray tomography: experiment, modeling, and algorithms”, Measurement Science and Technology, vol. 29, no. 8, p. 080101, 2018.
, “Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI.”, Front Physiol, vol. 10, no. 761, pp. 1-23, 2019.
, “Altered functional brain connectivity in patients with visually induced dizziness”, NeuroImage: Clinical, vol. 14, pp. 538–545, 2017.
, “Analysis and Comparison of Algorithms for the Tomographic Reconstruction of Curved Fibres”, Nondestructive Testing and Evaluation, vol. 35, no. 3, pp. 328-341, 2020.
, “Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform”, Computers and Electronics in Agriculture, vol. 162, pp. 749-758, 2019.
shahrimie_2019.pdf (3.12 MB)
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“The arcuate fasciculus network and verbal deficits in psychosis”, Translational Neuroscience, vol. 8, no. 1, pp. 117-126, 2017.
, “The arcuate fasciculus network and verbal deficits in psychosis”, Translational Neuroscience, vol. 8, no. 1, pp. 117-126, 2017.
, “The arcuate fasciculus network and verbal deficits in psychosis”, Translational Neuroscience, vol. 8, no. 1, pp. 117-126, 2017.
, “Atom column detection from simultaneously acquired ABF and ADF STEM images”, Ultramicroscopy, vol. 219, p. 113046, 2020.
, “Automatic landmark detection and mapping for 2D/3D registration with BoneNet”, Frontiers Veterinary Science, 2022.
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“Bias field reduction by localized Lloyd-Max quantization”, Magnetic Resonance Imaging, vol. 29, no. 4, pp. 536-545, 2011.
, “Brain ventricular volume changes induced by long-duration spaceflight”, Proceedings of the National Academy of Sciences, vol. 116, no. 21, pp. 10531-10536, 2019.
, “Chronic exposure to haloperidol and olanzapine leads to common and divergent shape changes in the rat hippocampus in the absence of grey-matter volume loss”, Psychological Medicine, vol. 46, no. 15, pp. 3081-3093, 2016.
, “Close-range hyperspectral image analysis for the early detection of plant stress responses in individual plants in a high-throughput phenotyping platform”, ISPRS Journal of Photogrammetry and Remote Sensing , vol. 138, pp. 121-138, 2018.
, “Close-range hyperspectral image analysis for the early detection of plant stress responses in individual plants in a high-throughput phenotyping platform”, ISPRS Journal of Photogrammetry and Remote Sensing , vol. 138, pp. 121-138, 2018.
, “Colon Visualization Using Cylindrical Parameterization”, Lecture Notes in Computer Science, vol. 4678, pp. 607-615, 2007.
Full text (1.44 MB)
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“A complementary DTI-histological study in a model of Huntingtons disease”, Neurobiology of Aging, vol. 33, pp. 945-959, 2012.
, “Computer Analysis of Two-Dimensional Electrophoresis Gels : A New Segmentation and Modeling Algorithm”, Electrophoresis, vol. 18, pp. 792-798, 1997.
, “Constrained spherical deconvolution of non-spherically sampled diffusion MRI data”, Human Brain Mapping, vol. 42, pp. 521–538, 2020.
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“On the construction of an inter-subject diffusion tensor magnetic resonance atlas of the healthy human brain”, NeuroImage, vol. 43, pp. 69-80, 2008.
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“Contextual Subpixel Mapping of Hyperspectral Images Making Use of a High Resolution Color Image”, IEEE JSTARS, Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 6, no. 2, pp. 779 - 791, 2013.
, “Diffusion kurtosis imaging allows the early detection and longitudinal follow-up of amyloid β-induced pathology.”, Alzheimer's Research & Therapy , vol. 10, no. 1, pp. 1-16, 2018.
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