Journal Article
V. Anania, Collier, Q., Veraart, J., Buikema, A. Eline, Vanhevel, F., Billiet, T., Jeurissen, B., den Dekker, A. J., and Sijbers, J.,
“Improved diffusion parameter estimation by incorporating T2 relaxation properties into the DKI-FWE model”,
NeuroImage, vol. 256, p. 119219, 2022.
I. Blockx, Verhoye, M., Van Audekerke, J., Bergwerf, I., Kane, J. X., Delgado Y Palacios, R., Veraart, J., Jeurissen, B., Raber, K., Von Hörsten, S., Ponsaerts, P., Sijbers, J., Leergaard, T. B., and Van Der Linden, A.,
“Identification and characterization of Huntington related pathology: an in vivo DKI imaging study”,
NeuroImage, vol. 63, no. 2, pp. 653-662, 2012.
M. Siqueira Pinto, Paolella, R., Billiet, T., Van Dyck, P., Guns, P. - J., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J.,
“Harmonisation of Brain Diffusion MRI: Concepts and Methods”,
Frontiers in Neuroscience , vol. 14, pp. 1-17, 2020.
Download paper (2.61 MB) A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G.,
“On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”,
NeuroImage, vol. 240, no. 118367, 2021.
B. Huyge, Sanctorum, J., Jeurissen, B., De Beenhouwer, J., and Sijbers, J.,
“Fiber Orientation Estimation from X-ray Dark Field Images of Fiber Reinforced Polymers using Constrained Spherical Deconvolution”,
Polymers, vol. 15, no. 13, p. 2887, 2023.
Download paper (2.95 MB) J. Hamaide, De Groof, G., Van Steenkiste, G., Jeurissen, B., Van Audekerke, J., Naeyaert, M., Van Ruijssevelt, L., Cornil, C., Sijbers, J., Verhoye, M., and Van Der Linden, A.,
“ Exploring sex differences in the adult zebra finch brain: In vivo diffusion tensor imaging and ex vivo super-resolution track density imaging”,
NeuroImage, vol. 146, pp. 789-803, 2017.
A. Van Ombergen, Demertzi, A., Tomilovskaya, E., Jeurissen, B., Sijbers, J., Kozlovskaya, I. B., Parizel, P. M., Van de Heyning, P. H., Sunaert, S., Laureys, S. S. L., and Wuyts, F. L.,
“The effect of spaceflight and microgravity on the human brain”,
Journal of Neurology, vol. 246, no. 1, pp. 18-22, 2017.
G. Barisano, Sepehrband, F., Collins, H. R., Jillings, S., Jeurissen, B., Taylor, A. J., Schoenmaekers, C., De Laet, C., Rukavishnikov, I., Nosikova, I., Rumshiskaya, A., Annen, J., Sijbers, J., Laureys, S. S. L., Van Ombergen, A., Petrovichev, V., Sinitsyn, V., Pechenkova, E. V., Grishin, A., Eulenburg, Pzu, Law, M., Sunaert, S., Parizel, P. M., Tomilovskaya, E., Roberts, D., and Wuyts, F. L.,
“The effect of prolonged Spaceflight on Cerebrospinal Fluid and Perivascular Spaces of Astronauts and Cosmonauts”,
PNAS, vol. 119, no. 17, 2022.
D. Perrone, Aelterman, J., Piżurica, A., Jeurissen, B., Philips, W., and Leemans, A.,
“The effect of Gibbs ringing artifacts on measures derived from diffusion MRI”,
NeuroImage, vol. 120, pp. 441–455, 2015.
E. Ribeiro Sabidussi, Klein, S., Jeurissen, B., and Poot, D. H. J.,
“dtiRIM: A generalisable deep learning method for diffusion tensor imaging”,
Neuroimage, vol. 269, 2023.
Download paper (5.11 MB) P. Van Dyck, Froeling, M., De Smet, E., Pullens, P., Torfs, M., Verdonk, P., Sijbers, J., Parizel, P. M., and Jeurissen, B.,
“Diffusion Tensor Imaging of the Anterior Cruciate Ligament Graft”,
Journal of Magnetic Resonance Imaging, vol. 46, no. 5, pp. 1423–1432, 2017.
N. Vidas-Guscic, van Rijswijk, J., Van Audekerke, J., Jeurissen, B., Nnah, I., Tang, H., Muñoz-Sanjuan, I., Pustina, D., Cachope, R., Van der Linden, A., Bertoglio, D., and Verhoye, M.,
“Diffusion MRI marks progressive alterations in fiber integrity in the zQ175DN mouse model of Huntington's disease”,
Neurobiology of Disease, vol. 193, p. 106438, 2024.
Q. Collier, Veraart, J., Jeurissen, B., Vanhevel, F., Pullens, P., Parizel, P. M., den Dekker, A. J., and Sijbers, J.,
“Diffusion kurtosis imaging with free water elimination: a Bayesian estimation approach”,
Magnetic Resonance in Medicine, vol. 80, no. 2, pp. 802-813, 2018.
Download paper (1.93 MB) C. Smekens, Beirinckx, Q., Bosmans, F., Vanhevel, F., Snoeckx, A., Sijbers, J., Jeurissen, B., Janssens, T., and Van Dyck, P.,
“Deep Learning-Enhanced Accelerated 2D TSE and 3D Super-Resolution Dixon TSE for Rapid Comprehensive Knee Joint Assessment”,
Investigative Radiology, vol. 60, no. 3, pp. 220-233, 2025.
D. Perrone, Jeurissen, B., Aelterman, J., Roine, T., Sijbers, J., Pizurica, A., Leemans, A., and Philips, W.,
“D-BRAIN: Anatomically Accurate Simulated Diffusion MRI Brain Data”,
PlosOne, vol. 11, pp. 1-23, 2016.
Download paper (16.22 MB) A. Demertzi, Van Ombergen, A., Tomilovskaya, E., Jeurissen, B., Pechenkova, E. V., Di Perri, C., Litvinova, L., Amico, E., Rumshiskaya, A., Rukavishnikov, I., Sijbers, J., Sinitsyn, V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L.,
“Cortical reorganization in an astronaut’s brain after long-duration spaceflight”,
Brain Structure and Function, vol. 221, no. 5, pp. 2873–2876, 2016.
Download paper (820.49 KB) J. Morez, Sijbers, J., Vanhevel, F., and Jeurissen, B.,
“Constrained spherical deconvolution of non-spherically sampled diffusion MRI data”,
Human Brain Mapping, vol. 42, pp. 521–538, 2020.
Download paper (5.87 MB) K. G. Schilling, Grussu, F., Ianus, A., Hansen, B., Howard, A. F. D., Barrett, R. L. C., Aggarwal, M., Michielse, S., Nasrallah, F., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., Tendler, B. C., Hertanu, A., Jeurissen, B., Verhoye, M., Frydman, L., van de Looij, Y., Hike, D., Dunn, J. F., Miller, K., Landman, B. A., Shemesh, N., Anderson, A., McKinnon, E., Farquharson, S., Dell'Acqua, F., Pierpaoli, C., Drobnjak, I., Leemans, A., Harkins, K. D., Descoteaux, M., Xu, D., Huang, H., Santin, M. D., Grant, S. C., Obenaus, A., Kim, G. S., Wu, D., Le Bihan, D., Blackband, S. J., Ciobanu, L., Fieremans, E., Bai, R., Leergaard, T. B., Zhang, J., Dyrby, T. B., G. Johnson, A., Cohen‐Adad, J., Budde, M. D., and Jelescu, I. O.,
“Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 2—Ex vivo imaging: Added value and acquisition”,
Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2535 - 2560, 2025.
I. O. Jelescu, Grussu, F., Ianus, A., Hansen, B., Barrett, R. L. C., Aggarwal, M., Michielse, S., Nasrallah, F., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., Tendler, B. C., Hertanu, A., Jeurissen, B., Verhoye, M., Frydman, L., van de Looij, Y., Hike, D., Dunn, J. F., Miller, K., Landman, B. A., Shemesh, N., Anderson, A., McKinnon, E., Farquharson, S., Dell'Acqua, F., Pierpaoli, C., Drobnjak, I., Leemans, A., Harkins, K. D., Descoteaux, M., Xu, D., Huang, H., Santin, M. D., Grant, S. C., Obenaus, A., Kim, G. S., Wu, D., Le Bihan, D., Blackband, S. J., Ciobanu, L., Fieremans, E., Bai, R., Leergaard, T. B., Zhang, J., Dyrby, T. B., G. Johnson, A., Cohen‐Adad, J., Budde, M. D., and Schilling, K. G.,
“Considerations and recommendations from the ISMRM diffusion study group for preclinical diffusion MRI: Part 1: In vivo small-animal imaging”,
Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2507 - 2534, 2025.
K. G. Schilling, Howard, A. F. D., Grussu, F., Ianus, A., Hansen, B., Barrett, R. L. C., Aggarwal, M., Michielse, S., Nasrallah, F., Syeda, W., Wang, N., Veraart, J., Roebroeck, A., Bagdasarian, A. F., Eichner, C., Sepehrband, F., Zimmermann, J., Soustelle, L., Bowman, C., Tendler, B. C., Hertanu, A., Jeurissen, B., Verhoye, M., Frydman, L., van de Looij, Y., Hike, D., Dunn, J. F., Miller, K., Landman, B. A., Shemesh, N., Anderson, A., McKinnon, E., Farquharson, S., Dell'Acqua, F., Pierpaoli, C., Drobnjak, I., Leemans, A., Harkins, K. D., Descoteaux, M., Xu, D., Huang, H., Santin, M. D., Grant, S. C., Obenaus, A., Kim, G. S., Wu, D., Le Bihan, D., Blackband, S. J., Ciobanu, L., Fieremans, E., Bai, R., Leergaard, T. B., Zhang, J., Dyrby, T. B., G. Johnson, A., Cohen‐Adad, J., Budde, M. D., and Jelescu, I. O.,
“Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3—Ex vivo imaging: Data processing, comparisons with microscopy, and tractography”,
Magnetic Resonance in Medicine, vol. 93, no. 6, pp. 2561 - 2582, 2025.
W. Van Hecke, Leemans, A., De Backer, S., Jeurissen, B., Parizel, P. M., and Sijbers, J.,
“Comparing isotropic and anisotropic smoothing for voxel-based DTI analyses: A simulation study”,
Human Brain Mapping, vol. 31, pp. 98-114, 2010.
H. Verhelst, Giraldo, D., Linden, C. Vander, Vingerhoets, G., Jeurissen, B., and Caeyenberghs, K.,
“Cognitive Training in Young Patients With Traumatic Brain Injury: A Fixel-Based Analysis.”,
Neurorehabil Neural Repair, 2019.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rumshiskaya, A., Litvinova, L., Nosikova, I., Pechenkova, E. V., Rukavishnikov, I., Manko, O., Danylichev, S., R. Rühl, M., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L.,
“Brain ventricular volume changes induced by long-duration spaceflight”,
Proceedings of the National Academy of Sciences, vol. 116, no. 21, pp. 10531-10536, 2019.
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rühl, M., Rumshiskaya, A., Nosikova, I., Litvinova, L., Annen, J., Pechenkova, E. V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L.,
“Brain Tissue–Volume Changes in Cosmonauts”,
New England Journal of Medicine, vol. 379, no. 17, pp. 1678 - 1680, 2018.
]