Publications
“A simple computer vision pipeline reveals the effects of isolation on social interaction dynamics in Drosophila”, Plos Computational Biology, vol. 14, no. 8, p. e1006410, 2018.
, “A three-dimensional digital neurological atlas of the mustached bat (Pteronotus parnellii)”, NeuroImage, vol. 183, pp. 300-313, 2018.
, “A three-dimensional digital neurological atlas of the mustached bat (Pteronotus parnellii)”, NeuroImage, vol. 183, pp. 300-313, 2018.
, “TomoBank: A Tomographic Data Repository for Computational X-ray Science”, Measurement Science and Technology, vol. 29, no. 3, pp. 1-10, 2018.
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“Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI.”, Front Physiol, vol. 10, no. 761, pp. 1-23, 2019.
, “Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform”, Computers and Electronics in Agriculture, vol. 162, pp. 749-758, 2019.
shahrimie_2019.pdf (3.12 MB)
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“Brain ventricular volume changes induced by long-duration spaceflight”, Proceedings of the National Academy of Sciences, vol. 116, no. 21, pp. 10531-10536, 2019.
, “Diffusion-weighted imaging reveals structural brain changes in cosmonauts after long-duration spaceflight”, 36th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine & Biology, Rotterdam, The Netherlands, vol. 32 (Suppl. 1). p. Magn Reson Mater Phy. 2019; 32(Suppl. 1):S101, 2019.
, “Improved precision and accuracy in q-space trajectory imaging by model-based super-resolution reconstruction”, Proc Intl Soc Mag Reson Med 27. p. 556, 2019.
, “An Interactive Visual Comparison Tool for 3D Volume Datasets represented by Nonlinearly Scaled 1D Line Plots through Space-filling Curves”, in 9th Conference on Industrial Computed Tomography, Padova, Italy, 2019.
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“Novel insight on effect and recovery of long-duration spaceflight on the ventricles of the space traveller's brain”, Proceedings of the International Astronautical Congress, IAC, vol. 2019. International Astronautical Federation, p. IAC–19_A1_2_4_x51230, 2019.
“Simulated grating-based x-ray phase contrast images of CFRP-like objects”, in 9th Conference on Industrial Computed Tomography, Padova, Italy, 2019, pp. 1-8.
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“Tools for the Analysis of Datasets from X-Ray Computed Tomography based on Talbot-Lau Grating Interferometry”, in 9th Conference on Industrial Computed Tomography, Padova, Italy, 2019.
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“A Visual Tool for the Analysis of Algorithms for Tomographic Fiber Reconstruction in Materials Science”, Computer Graphics Forum, vol. 38, no. 3, pp. 273-283, 2019.
, “Diffusion MRI reveals macro- and microstructural changes in cosmonauts' brains after long-duration spaceflight”, Proc Intl Soc Mag Reson Med 28. p. 4531, 2020.
, “Macro- and microstructural changes in cosmonauts’ brains after long-duration spaceflight”, Science Advances, vol. 6, no. 36, p. eaaz9488, 2020.
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“On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
, “The impact of long-duration spaceflight on brain structure and function”, University of Antwerp, 2021.
, “Outcome prediction in Mild Traumatic Brain Injury patients using conventional and diffusion MRI via Support Vector Machine: A CENTER-TBI study”, ISMRM & SMRT Annual Meeting. 2021.
, “Outcome prediction of mild traumatic brain injury using support vector machine based on longitudinal MRdiffusion imaging from CENTER-TBI”, Magn Reson Mater Phy (ESMRMB), vol. 34. p. S54, 2021.
, “3D total variation denoising in X-CT imaging applied to pore extraction in additively manufactured parts”, Measurement Science and Technology, vol. 33, no. 4, pp. 1-12, 2022.
, “An accelerated motion-compensated iterative reconstruction technique for dynamic computed tomography”, in Proc. SPIE 12242, Developments in X-Ray Tomography XIV, 122421F, San Diego, CA, United States, 2022.
, “Analytic derivatives of scaling motion-compensated projection operators for dynamic computed tomography”, in e-Journal of Nondestructive Testing, 2022, vol. 27 (3), pp. 1-5.
, “Automated Mitral Valve Assessment for Transcatheter Mitral Valve Replacement (TMVR) Planning”, Frontiers in Bioengineering and Biotechnology, vol. 16, pp. 1-13, 2022.
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“Brain Connectometry Changes in Space Travelers After Long-Duration Spaceflight”, Front. Neural Circuits, vol. 16, 2022.
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