Publications

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Journal Article
N. Six, Renders, J., Sijbers, J., and De Beenhouwer, J., “Gauss-Newton-Krylov for Reconstruction of Polychromatic X-ray CT Images”, IEEE Transactions on Computational Imaging, vol. 7, pp. 1304-1313, 2021.
A. De Luca, Ianus, A., Leemans, A., Palombo, M., Shemesh, N., Zhang, H., Alexander, D. C., Nilsson, M., Froeling, M., Biessels, G. - J., Zucchelli, M., Frigo, M., Albay, E., Sedlar, S., Alimi, A., Deslauriers-Gauthier, S., Deriche, R., Fick, R., Afzali, M., Pieciak, T., Bogusz, F., Aja-Fernandez, S., Ozarslan, E., Jones, D. K., Chen, H., Jin, M., Zhang, Z., Wang, F., Nath, V., Parvathaneni, P., Morez, J., Sijbers, J., Jeurissen, B., Shreyas,, Fadnavis,, Endres, S., Rokem, A., Garyfallidis, E., Sanchez, I., Prchkovska, V., Rodrigues, P., Landman, B. A., and Schilling, K. G., “On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge”, NeuroImage, vol. 240, no. 118367, 2021.
J. Sijbers and den Dekker, A. J., “Generalized likelihood Ratio tests for complex fMRI data: a simulation study”, IEEE Transactions on Medical Imaging, vol. 24, pp. 604-611, 2005.PDF icon Download paper (377.11 KB)
K. J. Batenburg and Sijbers, J., “Generic iterative subset algorithms for discrete tomography”, Discrete Applied Mathematics, vol. 157, pp. 438-451, 2009.PDF icon Download paper (1.41 MB)
V. Nguyen, Sanctorum, J., Van Wassenbergh, S., Dirckx, J. J. J., Sijbers, J., and De Beenhouwer, J., “Geometry Calibration of a Modular Stereo Cone-Beam X-ray CT System”, Journal of Imaging, vol. 7, no. 54, pp. 1-12, 2021.PDF icon Download paper (4.2 MB)
A. Postnov, De Schutter, T. T., Sijbers, J., Karperien, M., and De Clerck, N., “Glucocorticoid-Induced Osteoporosis in Growing Mice Is Not Prevented by Simultaneous Intermittent PTH Treatment”, Calcified Tissue International, vol. 85, pp. 530-537, 2009.PDF icon Download paper (344.96 KB)
P. - J. Vanthienen, Sanctorum, J., Huyge, B., Six, N., Sijbers, J., and De Beenhouwer, J., “Grating designs for cone beam edge illumination X-ray phase contrast imaging: a simulation study”, Optics Express, vol. 31, no. 17, pp. 28051-28064, 2023.
M. Siqueira Pinto, Paolella, R., Billiet, T., Van Dyck, P., Guns, P. - J., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J., “Harmonisation of Brain Diffusion MRI: Concepts and Methods”, Frontiers in Neuroscience , vol. 14, pp. 1-17, 2020.PDF icon Download paper (2.61 MB)
W. Keustermans, Huysmans, T., Danckaers, F., Zarowski, A., Schmelzer, B., Sijbers, J., and Dirckx, J. J. J., “High quality statistical shape modelling of the human nasal cavity and applications”, Royal Society Open Science, vol. 5, no. 12, 2018.PDF icon Download paper (1.85 MB)
A. J. den Dekker, Sijbers, J., and Van Dyck, D., “How to optimize the design of a quantitative HREM experiment so as to attain the highest precision”, Journal of Microscopy, vol. 194, pp. 95-104, 1999.PDF icon Download full paper (601.48 KB)
I. Blockx, Verhoye, M., Van Audekerke, J., Bergwerf, I., Kane, J. X., Delgado Y Palacios, R., Veraart, J., Jeurissen, B., Raber, K., Von Hörsten, S., Ponsaerts, P., Sijbers, J., Leergaard, T. B., and Van Der Linden, A., “Identification and characterization of Huntington related pathology: an in vivo DKI imaging study”, NeuroImage, vol. 63, no. 2, pp. 653-662, 2012.
J. Deng, Renders, J., Meenaketan, B. Linkoon P., Takalloo, S. Ebrahimi, Braeken, D., De Beenhouwer, J., and Sijbers, J., “Imaging Algorithm and Optimal Measurement Protocol for 3D Impedance Tomography on 2D High Density Micro Electrode Array”, IEEE Sensors, In Press.
M. Verhoye, Van Der Linden, A., Van Audekerke, J., Sijbers, J., Eens, M., and Balthazart, J., “Imaging birds in a bird cage: in-vivo FSE 3D MRI of bird brain”, MAGMA: Magnetic Resonance Materials in Physics, Biology and Medicine, vol. 6, pp. 22-27, 1998.PDF icon Download paper (1.33 MB)
A. J. den Dekker and Sijbers, J., “Implications of the Rician distribution for fMRI generalized likelihood ratio tests”, Magnetic Resonance Imaging, vol. 23, pp. 953-959, 2005.PDF icon Download paper (1.36 MB)
D. H. J. Poot, Pintjens, W., Verhoye, M., Van Der Linden, A., and Sijbers, J., “Improved B0 field map estimation for high field EPI”, Magnetic Resonance Imaging, vol. 28, pp. 441-450, 2010.PDF icon Download paper (1.29 MB)
V. Anania, Collier, Q., Veraart, J., Buikema, A. Eline, Vanhevel, F., Billiet, T., Jeurissen, B., den Dekker, A. J., and Sijbers, J., “Improved diffusion parameter estimation by incorporating T2 relaxation properties into the DKI-FWE model”, NeuroImage, vol. 256, p. 119219, 2022.
T. Huysmans, Sijbers, J., Vanpoucke, F., and Verdonk, B., “Improved Shape Modeling of Tubular Objects Using Cylindrical Parameterization”, Lecture Notes in Computer Science, vol. 4091, pp. 84-91, 2006.
J. Renders, Jeurissen, B., Nguyen, A. - T., De Beenhouwer, J., and Sijbers, J., “ImWIP: open-source image warping toolbox with adjoints and derivatives”, SoftwareX, vol. 24, p. 101524, 2023.PDF icon Download paper (1 MB)
P. M. Parizel, Van Rompaey, V., Loock, V. R., Van Hecke, W., Van Goethem, J., Leemans, A., and Sijbers, J., “Influence of User-Defined Parameters on Diffusion Tensor Tractography of the Corticospinal Tract”, The Neuroradiology Journal, pp. 139-147, 2007.
T. Roine, Jeurissen, B., Perrone, D., Aelterman, J., Philips, W., Leemans, A., and Sijbers, J., “Informed constrained spherical deconvolution (iCSD)”, Medical Image Analysis, vol. 24, no. 1, pp. 269–281, 2015.PDF icon Download accepted manuscript (987.95 KB)
L. F. Alves Pereira, Janssens, E., Cavalcanti, G. D. C., Tsang, I. R., Van Dael, M., Verboven, P., Nicolai, B., and Sijbers, J., “Inline Discrete Tomography system: application to agricultural product inspection”, Computers and Electronics in Agriculture, vol. 138, pp. 117–126, 2017.
N. Francken, Sanctorum, J., Sanctorum, J., Vanthienen, P. - J., Sijbers, J., and De Beenhouwer, J., “Inline edge illumination X-ray phase contrast imaging through mask misalignment”, Optics Express, In Press.
T. De Schryver, Dhaene, J., Dierick, M., Boone, M. N., Janssens, E., Sijbers, J., Van Dael, M., Verboven, P., Nicolai, B., and Van Hoorebeke, L., “In-line NDT with X-Ray CT combining sample rotation and translation”, NDT & E International, vol. 89, pp. 89–98, 2016.
T. Van De Looverbosch, Jiaqi, H., Tempelaere, A., Kelchtermans, K., Verboven, P., Tuytelaars, T., Sijbers, J., and Nicolai, B., “Inline nondestructive internal disorder detection in pear fruit using explainable deep anomaly detection on X-ray images”, Computers and Electronics in Agriculture, vol. 197, no. 106962, pp. 1-14, 2022.
D. Pelt, Gursoy, D., Palenstijn, W. J., Sijbers, J., De Carlo, F., and Batenburg, K. J., “Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data”, Journal of Synchrotron Radiation, vol. 23, pp. 842-849, 2016.

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