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J. Sijbers and den Dekker, A. J., “The performance of generalized likelihood ratio tests for complex functional MRI data in the presence of phase model misspecification”, in European Society of Magnetic Resonance in Medicine (ESMRMB), Copenhagen, Denmark, 2004, p. 96.
J. Sijbers, den Dekker, A. J., Scheunders, P., Raman, E., and Van Dyck, D., “Unbiased signal estimation in magnitude MR images”, in Proceedings of the European Society for Magnetic Resonance in Medicine and Biology, Brussels, Belgium, 1997, vol. 2, p. 174.
M. Siqueira Pinto, Winzeck, S., Kornaropoulos, E. N., Richter, S., Paolella, R., Correia, M. M., Glocker, B., Williams, G., Vik, A., Posti, J., Håberg, A. Kristine, Stenberg, J., Guns, P. - J., den Dekker, A. J., Menon, D. K., Sijbers, J., Van Dyck, P., and Newcombe, V. F. J., “Use of support vector machines approach via ComBat harmonized diffusion tensor imaging for the diagnosis and prognosis of mild traumatic brain injury: a CENTER-TBI study”, Journal of Neurotrauma, vol. 40, no. 13-14, pp. 1317-1338, 2023.
M. Siqueira Pinto, Paolella, R., Billiet, T., Van Dyck, P., Guns, P. - J., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J., “Harmonisation of Brain Diffusion MRI: Concepts and Methods”, Frontiers in Neuroscience , vol. 14, pp. 1-17, 2020.PDF icon Download paper (2.61 MB)
M. Siqueira Pinto, Anania, V., Paolella, R., Smekens, C., Billiet, T., Janssens, T., den Dekker, A. J., Sijbers, J., Guns, P. - J., and Van Dyck, P., “Harmonization of diffusion MRI on healthy subjects using NeuroCombat and LongCombat: a B-Q MINDED Brain Intra-and Inter-Scanner Study”, Frontiers in Neuroscience, vol. 19, 2025.
M. Siqueira Pinto, Winzeck, S., Correia, M. M., Kornaropoulos, E. N., Menon, D. K., Glocker, B., den Dekker, A. J., Sijbers, J., Guns, P. - J., Van Dyck, P., and Newcombe, V. F. J., “Outcome prediction in Mild Traumatic Brain Injury patients using conventional and diffusion MRI via Support Vector Machine: A CENTER-TBI study”, ISMRM & SMRT Annual Meeting. 2021.
M. Siqueira Pinto, Winzeck, S., Richter, S., Correia, M. M., Kornaropoulos, E. N., Menon, D. K., Glocker, B., Guns, P. - J., den Dekker, A. J., Sijbers, J., Newcombe, V. F. J., and Van Dyck, P., “Outcome prediction of mild traumatic brain injury using support vector machine based on longitudinal MRdiffusion imaging from CENTER-TBI”, Magn Reson Mater Phy (ESMRMB), vol. 34. p. S54, 2021.
M. Siqueira Pinto, Paolella, R., Billiet, T., Van Dyck, P., Guns, P. - J., Jeurissen, B., Ribbens, A., den Dekker, A. J., and Sijbers, J., “Voxelwise harmonisation of FA on a cohort of 605 healthy subjects using ComBat: an exploratory study”, ESMRMB 2019, 36th Annual Scientific Meeting, Rotterdam, NL. 2019.
M. Siqueira Pinto, “Improved Diagnosis and Prognosis of Mild Traumatic Brain Injury via Harmonised Diffusion MRI”, 2025.
N. Six, Renders, J., Sijbers, J., and De Beenhouwer, J., “Gauss-Newton-Krylov for Reconstruction of Polychromatic X-ray CT Images”, IEEE Transactions on Computational Imaging, vol. 7, pp. 1304-1313, 2021.
N. Six, De Beenhouwer, J., Van Nieuwenhove, V., Vanroose, W., and Sijbers, J., “Joint reconstruction and flat-field estimation using support estimation”, in IEEE Nuclear Science Symposium and Medical Imaging Conference, Sydney, Australia, 2018.PDF icon Download paper (1.53 MB)
N. Six, Renders, J., De Beenhouwer, J., and Sijbers, J., “Joint multi-contrast CT for edge illumination X-ray phase contrast imaging using split Barzilai-Borwein steps”, Optics Express, vol. 32, no. 2, pp. 1135-1150, 2024.PDF icon Download paper (13.42 MB)
N. Six, Renders, J., De Beenhouwer, J., and Sijbers, J., “Joint reconstruction of attenuation, refraction and dark field X-ray phase contrasts using split Barzilai-Borwein steps”, in SPIE Optical Engineering: Developments in X-Ray Tomography XIV , 2022, vol. 12242, p. 122420O.
N. Six, De Beenhouwer, J., and Sijbers, J., “poly-DART: A discrete algebraic reconstruction technique for polychromatic X-ray CT”, Optics Express, vol. 27, no. 23, pp. 33427-33435, 2019.PDF icon Download paper (997.08 KB)
N. Six, “Improved X-ray CT reconstruction techniques with non-linear imaging models”, 2024.
N. Six, Renders, J., Sijbers, J., and De Beenhouwer, J., “Newton-Krylov Methods For Polychromatic X-Ray CT”, in 2020 IEEE International Conference on Image Processing (ICIP), Abu Dhabi, 2020, pp. 3045-3049.
N. Six, De Beenhouwer, J., and Sijbers, J., “pDART: Discrete algebraic reconstruction using a polychromatic forward model”, in The Fifth International Conference on Image Formation in X-Ray Computed Tomography, Salt Lake City, Utah, USA, 2018.PDF icon Download paper (1.61 MB)
C. Smekens, Vanhevel, F., Beirinckx, Q., Janssens, T., and Van Dyck, P., “Accelerated Dual-contrast Three-dimensional Knee Magnetic Resonance Imaging Using Super-resolution Reconstructed Deep Learning-enhanced Two-dimensional Dixon Turbo Spin-echo Imaging”, Seminars in Musculoskeletal Radiology, vol. 27, no. S01. Thieme Medical Publishers, Inc., pp. 1-24, 2023.
C. Smekens, Vanhevel, F., Jeurissen, B., Van Dyck, P., Sijbers, J., and Janssens, T., “Short T2* quantification of knee structures based on accelerated UTE Spiral VIBE MRI with SPIRiT reconstruction”, 12th Annual Meeting of the ISMRM Benelux Chapter, Arnhem, The Netherlands. 2020.
C. Smekens, Vanhevel, F., Jeurissen, B., Van Dyck, P., Sijbers, J., and Janssens, T., “Short T2* quantification of knee structures based on accelerated UTE Spiral VIBE MRI with SPIRiT reconstruction”, Proc Intl Soc Mag Reson Med 28. p. 2687, 2020.
C. Smekens, Beirinckx, Q., Vanhevel, F., Van Dyck, P., den Dekker, A. J., Sijbers, J., Janssens, T., and Jeurissen, B., “Super-resolution T2* mapping of the knee using UTE Spiral VIBE MRI”, Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), 29th Annual Meeting, An Online Experience. p. 3920, 2021.
C. Smekens, Beirinckx, Q., Bosmans, F., Vanhevel, F., Snoeckx, A., Sijbers, J., Jeurissen, B., Janssens, T., and Van Dyck, P., “Deep Learning-Enhanced Accelerated 2D TSE and 3D Super-Resolution Dixon TSE for Rapid Comprehensive Knee Joint Assessment”, Investigative Radiology, vol. 60, no. 3, pp. 220-233, 2025.
C. Smekens, Beirinckx, Q., Vanhevel, F., Van Dyck, P., den Dekker, A. J., Sijbers, J., Janssens, T., and Jeurissen, B., “High-resolution T2* mapping of the knee based on UTE Spiral VIBE MRI”, Magn Reson Mater Phy, vol. 34. pp. S53-S54, 2021.
B. de Smit, McClure, M., Palenstijn, W. J., Sparling, I. E., and Wagon, S., “Through the Looking-Glass, and What the Quadratic Camera Found There”, The Mathematical Intelligencer, vol. 34, no. 3, pp. 30 - 34, 2012.
A. Smolders, “Data-driven methods for the analysis of time-resolved mental chronometry fMRI data sets”, 2007.PDF icon Download thesis (3.79 MB)

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