Publications

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Journal Article
A. Van Ombergen, Jillings, S., Jeurissen, B., Tomilovskaya, E., Rühl, M., Rumshiskaya, A., Nosikova, I., Litvinova, L., Annen, J., Pechenkova, E. V., Kozlovskaya, I. B., Sunaert, S., Parizel, P. M., Sinitsyn, V., Laureys, S. S. L., Sijbers, J., Eulenburg, Pzu, and Wuyts, F. L., Brain Tissue–Volume Changes in Cosmonauts, New England Journal of Medicine, vol. 379, no. 17, pp. 1678 - 1680, 2018.
Z. Mai, Hanel, R., Batenburg, K. J., Verhoye, M., Scheunders, P., and Sijbers, J., Bias field reduction by localized Lloyd-Max quantization, Magnetic Resonance Imaging, vol. 29, no. 4, pp. 536-545, 2011.
W. Van Aarle, Batenburg, K. J., and Sijbers, J., Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART), IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4608-4621, 2012.PDF icon Download paper (3.91 MB)
J. Sijbers, Vanrumste, B., Van Hoey, G., Boon, P., Verhoye, M., Van Der Linden, A., and Van Dyck, D., Automatic localization of EEG electrode markers within 3D MR data, Magnetic Resonance Imaging, vol. 18, pp. 485-488, 2000.PDF icon Download full paper (185.08 KB)
J. Sijbers, Poot, D. H. J., den Dekker, A. J., and Pintjens, W., Automatic estimation of the noise variance from the histogram of a magnetic resonance image, Physics in Medicine and Biology, vol. 52, pp. 1335-1348, 2007.PDF icon Download paper (297.18 KB)
T. Huysmans, Sijbers, J., and Verdonk, B., Automatic Construction of Correspondences for Tubular Surfaces, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 636-651, 2010.PDF icon Download paper (3.46 MB)
B. Jeurissen, Leemans, A., and Sijbers, J., Automated correction of improperly rotated diffusion gradient orientations in diffusion-weighted MRI, Medical Image Analysis, vol. 18, pp. 953-962, 2014.
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
B. G. Booth, Keijsers, N. L. W., Sijbers, J., and Huysmans, T., An assessment of the information lost when applying data reduction techniques to dynamic plantar pressure measurements, Journal of Biomechanics , vol. 87, pp. 161-166, 2019.
P. Van Dyck, Zazulia, K., Smekens, C., Heusdens, C. H. W., Janssens, T., and Sijbers, J., Assessment of Anterior Cruciate Ligament Graft Maturity With Conventional Magnetic Resonance Imaging, The Orthopaedic Journal of Sports Medicine, vol. 7, no. 6, pp. 1-9, 2019.PDF icon Download paper (202.39 KB)
R. Pinho, Tournoy, K. G., and Sijbers, J., Assessment and Stenting of Tracheal Stenosis using Deformable Shape Models, Medical Image Analysis, vol. 15, pp. 250-266, 2011.
A. Bernat, Huysmans, T., Van Glabbeek, F., Sijbers, J., Gielen, J., and Van Tongel, A., The anatomy of the clavicle: A Three-dimensional Cadaveric Study, Clinical anatomy, vol. 27, no. 5, pp. 712–723, 2014.PDF icon Download paper (554.93 KB)
W. Jacquet, Nyssen, E., Sun, Y., De Munter, S., Sijbers, J., and Politis, C., Alveolar Nerve Unfolding Technique for Synoptic Analysis: Visualization and Quantification of Inferior Alveolar Nerve Tracings in Three-dimensional Cone-Beam Computed Tomography., The Journal of craniofacial surgery, vol. 24, no. 4, pp. e374-7, 2013.
A. Van Ombergen, Heine, L., Jillings, S., Roberts, E., Jeurissen, B., Van Rompaey, V., Mucci, V., Vanhecke, S., Sijbers, J., Vanhevel, F., Sunaert, S., Bahri, M. Ali, Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., Altered functional brain connectivity in patients with visually induced dizziness, NeuroImage: Clinical, vol. 14, pp. 538–545, 2017.
B. T. Antonsen, Jiang, Y., Veraart, J., Qu, H., Nguyen, H. P., Sijbers, J., Von Hörsten, S., Johnson, A. G., and Leergaard, T. B., Altered diffusion tensor imaging measurements in aged transgenic Huntington disease rats., Brain structure & function, vol. 218, no. 3, pp. 767-78, 2013.PDF icon Download paper (645.02 KB)
E. Pechenkova, Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., Mershina, E., Sinitsyn, V., Van Ombergen, A., Jeurissen, B., Jillings, S., Laureys, S., Sijbers, J., Grishin, A., Chernikova, L., Naumov, I., Kornilova, L., Wuyts, F. L., Tomilovskaya, E., and Kozlovskaya, I., Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI., Front Physiol, vol. 10, p. 761, 2019.
F. Bleichrodt, De Beenhouwer, J., Sijbers, J., and Batenburg, K. J., Aligning Projection Images from Binary Volumes, Fundamenta Informaticae, vol. 135, pp. 1-22, 2014.
A. Leemans, Sijbers, J., De Backer, S., Vandervliet, E., and Parizel, P. M., Affine Coregistration of Diffusion Tensor Magnetic Resonance Images Using Mutual Information, Lecture Notes in Computer Science, vol. 3708, pp. 523-530, 2005.PDF icon Download full paper (1.26 MB)
K. J. Batenburg, De Carlo, F., Mancini, L., and Sijbers, J., Advanced X-ray tomography: experiment, modeling, and algorithms, Measurement Science and Technology, vol. 29, no. 8, p. 080101, 2018.
A. Dabravolski, Batenburg, K. J., and Sijbers, J., Adaptive zooming in X-ray computed tomography, Journal of X-Ray Science and Technology, vol. 22, pp. 77-89, 2014.PDF icon Download paper (3.77 MB)
K. J. Batenburg and Sijbers, J., Adaptive thresholding of tomograms by projection distance minimization, Pattern Recognition, vol. 42, pp. 2297-2305, 2009.PDF icon Download paper (1.05 MB)
J. Sijbers, den Dekker, A. J., Verhoye, M., Van Der Linden, A., and Van Dyck, D., Adaptive anisotropic noise filtering for magnitude MR data, Magnetic Resonance Imaging, vol. 17, pp. 1533-1539, 1999.PDF icon Download full paper (366 KB)
T. Roelandts, Batenburg, K. J., Biermans, E., Kubel, C., Bals, S., and Sijbers, J., Accurate segmentation of dense nanoparticles by partially discrete electron tomography, Ultramicroscopy, vol. 114, pp. 96-105, 2012.PDF icon Download paper (1.71 MB)
J. Soons, Danckaers, F., Keustermans, W., Huysmans, T., Sijbers, J., Casselman, J. W., and Dirckx, J. J. J., 3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT, Hearing research, vol. 340, pp. 79-88, 2016.

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