Publications

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Journal Article
J. Van Houtte, Vandenberghe, F., Zheng, G., Huysmans, T., and Sijbers, J., “EquiSim: An open-source articulatable statistical model of the equine distal limb”, Frontiers in Veterinary Science , vol. 8, no. 75, 2021.
S. Van Doorslaer, Beirinckx, Q., Nys, K., Mangiameli, M. Florencia, Cuypers, B., Callens, F., Vrielinck, H., and González, J. Carlos, “EPR and DFT analysis of biologically relevant chromium(V) complexes with d-glucitol and d-glucose”, Journal of Inorganic Biochemistry, vol. 162, pp. 216 - 226, 2016.
Z. Mahmood and Scheunders, P., “Enhanced visualization of hyperspectral images”, IEEE Geoscience and Remote Sensing letters, vol. 8, pp. 869-873, 2011.
J. Goyens, Vasilopoulou-Kampitsi, M., Claes, R., Sijbers, J., and Mancini, L., “Enhanced contrast in X-ray microtomographic images of the membranous labyrinth using different X-ray sources and scanning modes”, Journal of Anatomy, vol. 233, p. 770--782, 2018.PDF icon Download paper (1.44 MB)
E. Van de Casteele, Van Dyck, D., Sijbers, J., and Raman, E., “An energy-based beam hardening model in tomography”, Physics in Medicine and Biology, vol. 47, pp. 4181-4190, 2002.PDF icon Download full paper (203.21 KB)
D. Kazantsev, Van Eyndhoven, G., Lionheart, W. R. B., Withers, P. J., Dobson, K. J., McDonald, S. A., Atwood, R., and Lee, P. D., “Employing temporal self-similarity across the entire time domain in computed tomography reconstruction”, Philosophical Transactions of the Royal Society of London A: Mathematical, Physical and Engineering Sciences, vol. 373, 2015.
N. Francken, Sanctorum, J., Huyge, B., Sijbers, J., and De Beenhouwer, J., “Efficient X-ray dark field contrast simulations using a condensed history approach”, Optics Express, vol. 33, no. 2, pp. 3562-3576, 2025.
B. Koirala and Scheunders, P., “An efficient method for water content estimation of building materials from spectral reflectance”, NDT & E International, vol. 147, p. 103214, 2024.PDF icon Download paper (7.21 MB)
L. - P. Lumbeeck, Paramonov, P., Sijbers, J., and De Beenhouwer, J., “Efficient iterative reconstruction with beam shape compensation for THz computed tomography”, Applied Optics, vol. 62, no. 17, pp. F31-F40, 2023.PDF icon Download paper (1.81 MB)
W. Van Hecke, Leemans, A., Sage, C. A., Veraart, J., Sijbers, J., and Sunaert, S., “The effect of template selection on diffusion tensor voxel based analysis results”, NeuroImage, vol. 55, pp. 566-573, 2011.
A. Van Ombergen, Demertzi, A., Tomilovskaya, E., Jeurissen, B., Sijbers, J., Kozlovskaya, I. B., Parizel, P. M., Van de Heyning, P. H., Sunaert, S., Laureys, S. S. L., and Wuyts, F. L., “The effect of spaceflight and microgravity on the human brain”, Journal of Neurology, vol. 246, no. 1, pp. 18-22, 2017.
B. De Samber, De Rycke, R., De Bruyne, M., Kienhuis, M., Sandblad, L., Bohic, S., Cloetens, P., Urban, C., Polerecky, L., and Vincze, L., “Effect of sample preparation techniques upon single cell chemical imaging: A practical comparison between synchrotron radiation based X-ray fluorescence (SR-XRF) and Nanoscopic Secondary Ion Mass Spectrometry (nano-SIMS)”, Analytica Chimica Acta, vol. 1106, pp. 22-32, 2020.PDF icon Download paper (4.01 MB)
G. Barisano, Sepehrband, F., Collins, H. R., Jillings, S., Jeurissen, B., Taylor, A. J., Schoenmaekers, C., De Laet, C., Rukavishnikov, I., Nosikova, I., Rumshiskaya, A., Annen, J., Sijbers, J., Laureys, S. S. L., Van Ombergen, A., Petrovichev, V., Sinitsyn, V., Pechenkova, E. V., Grishin, A., Eulenburg, Pzu, Law, M., Sunaert, S., Parizel, P. M., Tomilovskaya, E., Roberts, D., and Wuyts, F. L., “The effect of prolonged Spaceflight on Cerebrospinal Fluid and Perivascular Spaces of Astronauts and Cosmonauts”, PNAS, vol. 119, no. 17, 2022.
W. Keustermans, Huysmans, T., Schmelzer, B., Sijbers, J., and Dirckx, J. J. J., “The effect of nasal shape on the thermal conditioning of inhaled air: Using clinical tomographic data to build a large-scale statistical shape model”, Computers in Biology and Medicine, vol. 117, no. 103600, pp. 1-13, 2020.
D. Perrone, Aelterman, J., Piżurica, A., Jeurissen, B., Philips, W., and Leemans, A., “The effect of Gibbs ringing artifacts on measures derived from diffusion MRI”, NeuroImage, vol. 120, pp. 441–455, 2015.
N. Francken, Sanctorum, J., Paramonov, P., Sijbers, J., and De Beenhouwer, J., “Edge illumination x-ray phase contrast simulations using the CAD-ASTRA toolbox”, Optics Express, vol. 32, no. 6, pp. 10005-10021, 2024.
K. Hufkens, Ceulemans, R., and Scheunders, P., “Ecotones in vegetation ecology: methodology and definitions revisited”, Ecological Research, vol. 24, pp. 977-986, 2009.
F. Bleichrodt, van Leeuwen, T., Palenstijn, W. J., Van Aarle, W., Sijbers, J., and Batenburg, K. J., “Easy implementation of advanced tomography algorithms using the ASTRA toolbox with Spot operators”, Numerical Algorithms, vol. 71, pp. 673-697, 2016.
V. Van Nieuwenhove, De Beenhouwer, J., De Carlo, F., Mancini, L., Marone, F., and Sijbers, J., “Dynamic intensity normalization using eigen flat fields in X-ray imaging”, Optics Express, vol. 23, no. 21, pp. 27975-27989, 2015.Package icon Download Matlab code (2.92 MB)PDF icon Download paper (1.68 MB)
A. Presenti, Sijbers, J., and De Beenhouwer, J., “Dynamic few-view X-ray imaging for inspection of CAD-based objects”, Expert Systems with Applications, vol. 180, p. 115012, 2021.
A. Dabravolski, Batenburg, K. J., and Sijbers, J., “Dynamic Angle Selection in X-ray Computed Tomography”, Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, vol. 324, pp. 17-24, 2014.
K. J. Batenburg, Palenstijn, W. J., Balazs, P., and Sijbers, J., “Dynamic angle selection in binary tomography”, Computer Vision and Image Understanding, vol. 117, no. 5, pp. 306–318, 2013.PDF icon Download paper (2.71 MB)
E. Ribeiro Sabidussi, Klein, S., Jeurissen, B., and Poot, D. H. J., “dtiRIM: A generalisable deep learning method for diffusion tensor imaging”, Neuroimage, vol. 269, 2023.PDF icon Download paper (5.11 MB)
T. De Bondt, Van Hecke, W., Veraart, J., Leemans, A., Sijbers, J., Sunaert, S., Jacquemyn, Y., and Parizel, P. M., “Does the use of hormonal contraceptives cause microstructural changes in cerebral white matter? Preliminary results of a DTI and tractography study.”, European radiology, vol. 23, no. 1, pp. 57-64, 2013.PDF icon Download paper (411.18 KB)
W. J. Palenstijn, Bédorf, J., Sijbers, J., and Batenburg, K. J., “A distributed ASTRA Toolbox”, Advanced Structural and Chemical Imaging, vol. 2, no. 19, 2016.PDF icon Download paper (2.7 MB)

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