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Journal Article
L. - P. Lumbeeck, Paramonov, P., Sijbers, J., and De Beenhouwer, J., “Efficient iterative reconstruction with beam shape compensation for THz computed tomography”, Applied Optics, vol. 62, no. 17, pp. F31-F40, 2023.PDF icon Download paper (1.81 MB)
W. Van Hecke, Leemans, A., Sage, C. A., Veraart, J., Sijbers, J., and Sunaert, S., “The effect of template selection on diffusion tensor voxel based analysis results”, NeuroImage, vol. 55, pp. 566-573, 2011.
A. Van Ombergen, Demertzi, A., Tomilovskaya, E., Jeurissen, B., Sijbers, J., Kozlovskaya, I. B., Parizel, P. M., Van de Heyning, P. H., Sunaert, S., Laureys, S. S. L., and Wuyts, F. L., “The effect of spaceflight and microgravity on the human brain”, Journal of Neurology, vol. 246, no. 1, pp. 18-22, 2017.
B. De Samber, De Rycke, R., De Bruyne, M., Kienhuis, M., Sandblad, L., Bohic, S., Cloetens, P., Urban, C., Polerecky, L., and Vincze, L., “Effect of sample preparation techniques upon single cell chemical imaging: A practical comparison between synchrotron radiation based X-ray fluorescence (SR-XRF) and Nanoscopic Secondary Ion Mass Spectrometry (nano-SIMS)”, Analytica Chimica Acta, vol. 1106, pp. 22-32, 2020.PDF icon Download paper (4.01 MB)
G. Barisano, Sepehrband, F., Collins, H. R., Jillings, S., Jeurissen, B., Taylor, A. J., Schoenmaekers, C., De Laet, C., Rukavishnikov, I., Nosikova, I., Rumshiskaya, A., Annen, J., Sijbers, J., Laureys, S. S. L., Van Ombergen, A., Petrovichev, V., Sinitsyn, V., Pechenkova, E. V., Grishin, A., Eulenburg, Pzu, Law, M., Sunaert, S., Parizel, P. M., Tomilovskaya, E., Roberts, D., and Wuyts, F. L., “The effect of prolonged Spaceflight on Cerebrospinal Fluid and Perivascular Spaces of Astronauts and Cosmonauts”, PNAS, vol. 119, no. 17, 2022.
N. Van Brempt, Sgammato, R., Beirinckx, Q., Hammerschmid, D., Sobott, F., Dewilde, S., Moens, L., Herrebout, W., Johannessen, C., and Van Doorslaer, S., “The effect of pH and nitrite on the haem pocket of GLB-33, a globin-coupled neuronal transmembrane receptor of Caenorhabditis elegans.”, Biochim Biophys Acta Proteins Proteom, vol. 1871, no. 4, p. 140913, 2023.
W. Keustermans, Huysmans, T., Schmelzer, B., Sijbers, J., and Dirckx, J. J. J., “The effect of nasal shape on the thermal conditioning of inhaled air: Using clinical tomographic data to build a large-scale statistical shape model”, Computers in Biology and Medicine, vol. 117, no. 103600, pp. 1-13, 2020.
D. Perrone, Aelterman, J., Piżurica, A., Jeurissen, B., Philips, W., and Leemans, A., “The effect of Gibbs ringing artifacts on measures derived from diffusion MRI”, NeuroImage, vol. 120, pp. 441–455, 2015.
K. Hufkens, Ceulemans, R., and Scheunders, P., “Ecotones in vegetation ecology: methodology and definitions revisited”, Ecological Research, vol. 24, pp. 977-986, 2009.
F. Bleichrodt, van Leeuwen, T., Palenstijn, W. J., Van Aarle, W., Sijbers, J., and Batenburg, K. J., “Easy implementation of advanced tomography algorithms using the ASTRA toolbox with Spot operators”, Numerical Algorithms, vol. 71, pp. 673-697, 2016.
V. Van Nieuwenhove, De Beenhouwer, J., De Carlo, F., Mancini, L., Marone, F., and Sijbers, J., “Dynamic intensity normalization using eigen flat fields in X-ray imaging”, Optics Express, vol. 23, no. 21, pp. 27975-27989, 2015.Package icon Download Matlab code (2.92 MB)PDF icon Download paper (1.68 MB)
A. Presenti, Sijbers, J., and De Beenhouwer, J., “Dynamic few-view X-ray imaging for inspection of CAD-based objects”, Expert Systems with Applications, vol. 180, p. 115012, 2021.
A. Dabravolski, Batenburg, K. J., and Sijbers, J., “Dynamic Angle Selection in X-ray Computed Tomography”, Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, vol. 324, pp. 17-24, 2014.
K. J. Batenburg, Palenstijn, W. J., Balazs, P., and Sijbers, J., “Dynamic angle selection in binary tomography”, Computer Vision and Image Understanding, vol. 117, no. 5, pp. 306–318, 2013.PDF icon Download paper (2.71 MB)
E. Ribeiro Sabidussi, Klein, S., Jeurissen, B., and Poot, D. H. J., “dtiRIM: A generalisable deep learning method for diffusion tensor imaging”, Neuroimage, vol. 269, 2023.PDF icon Download paper (5.11 MB)
T. De Bondt, Van Hecke, W., Veraart, J., Leemans, A., Sijbers, J., Sunaert, S., Jacquemyn, Y., and Parizel, P. M., “Does the use of hormonal contraceptives cause microstructural changes in cerebral white matter? Preliminary results of a DTI and tractography study.”, European radiology, vol. 23, no. 1, pp. 57-64, 2013.PDF icon Download paper (411.18 KB)
W. J. Palenstijn, Bédorf, J., Sijbers, J., and Batenburg, K. J., “A distributed ASTRA Toolbox”, Advanced Structural and Chemical Imaging, vol. 2, no. 19, 2016.PDF icon Download paper (2.7 MB)
R. Heylen and Scheunders, P., “A distance geometric framework for non-linear hyperspectral unmixing”, IEEE-JSTARS, Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 7, pp. 1879-1888, 2014.
A. Smolders, Martino, D. F., Staeren, N., Scheunders, P., Sijbers, J., Goebel, R., and Formisano, E., “Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis”, Magnetic Resonance Imaging, vol. 25, pp. 860-868, 2007.PDF icon Download paper (658.36 KB)
H. Segers, Palenstijn, W. J., Batenburg, K. J., and Sijbers, J., “Discrete Tomography in MRI: a Simulation Study”, Fundamenta Informaticae, vol. 125, no. 3-4, pp. 223-237, 2013.
E. Van de Casteele, Perilli, E., Van Aarle, W., Reynolds, K., and Sijbers, J., “Discrete tomography in an in vivo small animal bone study”, Journal of Bone and Mineral Metabolism, vol. 36, no. 1, pp. 40–53, 2018.
J. Christopher, Lumbeeck, L. - P., Paramonov, P., De Beenhouwer, J., and Sijbers, J., “Discrete Terahertz tomography: a simulation study”, e-Journal of Nondestructive Testing, vol. 27, no. 3, 2022.PDF icon Download paper (345.5 KB)
P. Van Dyck, Billiet, T., Desbuquoit, D., Verdonk, P., Heusdens, C. H., Roelant, E., Sijbers, J., and Froeling, M., “Diffusion tensor imaging of the anterior cruciate ligament graft following reconstruction: a longitudinal study”, European Radiology, vol. 34, pp. 6673–6684, 2020.
P. Van Dyck, Froeling, M., De Smet, E., Pullens, P., Torfs, M., Verdonck, P., Sijbers, J., Parizel, P. M., and Jeurissen, B., “Diffusion Tensor Imaging of the Anterior Cruciate Ligament Graft”, Journal of Magnetic Resonance Imaging, vol. 46, no. 5, pp. 1423–1432, 2017.
P. Van Dyck, Froeling, M., Heusdens, C. H. W., Sijbers, J., Ribbens, A., and Billiet, T., “Diffusion Tensor Imaging of the Anterior Cruciate Ligament Following Primary Repair with Internal Bracing: a Longitudinal Study”, Journal of Orthopaedic Research , vol. 39, pp. 1318–1330, 2021.

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