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W. Van Aarle, Batenburg, K. J., Van Gompel, G., Van de Casteele, E., and Sijbers, J., Super-resolution for computed tomography based on discrete tomography, IEEE Transactions on Image Processing, vol. 23, no. 3, pp. 1181 - 1193, 2014.PDF icon Download paper (2.24 MB)
W. Van Aarle, Batenburg, K. J., and Sijbers, J., Optimal threshold selection for segmentation of dense homogeneous objects in tomographic reconstructions, IEEE Transactions on Medical Imaging, vol. 30, pp. 980-989, 2011.PDF icon Download paper (1.59 MB)
W. Van Aarle, Ludwig, W., King, A., and Penumadu, D., An accurate projection model for diffraction image formation and inversion using a polychromatic cone beam, Journal of Applied Crystallography, vol. 48, pp. 334-343, 2015.
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
W. Van Aarle, Palenstijn, W. J., Cant, J., Janssens, E., Bleichrodt, F., Dabravolski, A., De Beenhouwer, J., Batenburg, K. J., and Sijbers, J., Fast and Flexible X-ray Tomography Using the ASTRA Toolbox, Optics Express, vol. 24, pp. 25129-25147, 2016.PDF icon Download paper (8.34 MB)
W. Van Aarle, Batenburg, K. J., and Sijbers, J., Automatic parameter estimation for the Discrete Algebraic Reconstruction Technique (DART), IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4608-4621, 2012.PDF icon Download paper (3.91 MB)
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I. J. Tsang, Tsang, I. R., and Van Dyck, D., Image processing using neighbourhood coding, Pattern Recognition Letters, vol. 20, pp. 1279-1286, 1999.
I. R. Tsang and Tsang, I. J., Cluster size diversity, percolation, and complex systems, Physical Review E, vol. 60, pp. 2684-2698, 1999.
I. J. Tsang, Tsang, I. R., De Boeck, B., and Van Dyck, D., Scaling and critical probability for cluster size and lattice animals diversity on randomly occupied square lattices, Journal of Physics A: Mathematical and General, vol. 33, pp. 2739-2754, 2000.
J. - D. Tournier, Smith, R., Raffelt, D., Tabbara, R., Dhollander, T., Pietsch, M., Christiaens, D., Jeurissen, B., Yeh, C. - H., and Connelly, A., MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation., Neuroimage, p. 116137, 2019.
L. Tits, Heylen, R., Somers, B., Scheunders, P., and Coppin, P., A geometric unmixing concept for the selection of optimal binary endmember combinations, IEEE Geoscience and Remote Sensing letters, vol. 12, pp. 82-86, 2015.
G. Thoonen, Hufkens, K., Vanden Borre, J., Spanhove, T., and Scheunders, P., Accuracy assessment of contextual classification results for vegetation mapping, International Journal of Applied Earth Observation and Geoinformation, vol. 15, pp. 7 - 15, 2012.
G. Thoonen, Mahmood, Z., Peeters, S., and Scheunders, P., Multisource classification of color and hyperspectral images using color attribute profiles and composite decision fusion, Selected Topics in Applied Earth Observations and Remote Sensing, IEEE Journal of, vol. 5, pp. 510 - 521, 2012.
G. Thoonen, Spanhove, T., Vanden Borre, J., and Scheunders, P., Classification of heathland vegetation in a hierarchical contextual framework, International Journal of Remote Sensing, vol. 34, no. 1, pp. 96 - 111, 2013.
G. Thoonen, Nys, B., Haegen, V. Y., Roy, D. G., and Scheunders, P., Automatic forensic analysis of automotive paints using optical microscopy, Forensic Science International, vol. 259, pp. 210-220, 2016.
C. M. W. Tax, Jeurissen, B., Vos, S. B., Viergever, M. A., and Leemans, A., Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data., NeuroImage, vol. 86, pp. 67-80, 2014.
F. Tajdari, Huysmans, T., Yang, Y., and Song, Y., Feature preserving non-rigid iterative weighted closest point and semi-curvature registration, IEEE Transactions on Image Processing, 2022.
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P. V. Sudeep, Palanisamy, P., Kesavadas, C., Sijbers, J., den Dekker, A. J., and Rajan, J., A nonlocal maximum likelihood estimation method for enhancing magnetic resonance phase maps, Signal Image and Video Processing, vol. 11, no. 5, pp. 913-920, 2017.
H. Struyfs, Van Hecke, W., Veraart, J., Sijbers, J., Slaets, S., De Belder, M., Wuyts, L., Peters, B., Sleegers, K., Robberecht, C., Van Broeckhoven, C., De Belder, F., Parizel, P. M., and Engelborghs, S., Diffusion Kurtosis Imaging: a possible MRI biomarker for AD diagnosis?, Journal of Alzheimer’s Disease, vol. 48, pp. 937-948, 2015.PDF icon Download paper (374.95 KB)
K. Stanković, Huysmans, T., Danckaers, F., Sijbers, J., and Booth, B. G., Subject-specific identification of three dimensional foot shape deviations using statistical shape analysis, Expert Systems With Applications, vol. 151, no. 113372, pp. 1-11, 2020.
K. Stanković, Booth, B. G., Danckaers, F., Burg, F., Vermaelen, P., Duerinck, S., Sijbers, J., and Huysmans, T., Three-dimensional quantitative analysis of healthy foot shape: a proof of concept study, Journal of Foot and Ankle Research, vol. 11, no. 8, pp. 1-13, 2018.PDF icon Download paper (2.24 MB)
J. Soons, Danckaers, F., Keustermans, W., Huysmans, T., Sijbers, J., Casselman, J. W., and Dirckx, J. J. J., 3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT, Hearing research, vol. 340, pp. 79-88, 2016.
A. Smolders, Martino, D. F., Staeren, N., Scheunders, P., Sijbers, J., Goebel, R., and Formisano, E., Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis, Magnetic Resonance Imaging, vol. 25, pp. 860-868, 2007.PDF icon Download paper (658.36 KB)
B. de Smit, McClure, M., Palenstijn, W. J., Sparling, I. E., and Wagon, S., Through the Looking-Glass, and What the Quadratic Camera Found There, The Mathematical Intelligencer, vol. 34, no. 3, pp. 30 - 34, 2012.
C. Smekens, Beirinckx, Q., Bosmans, F., Vanhevel, F., Snoeckx, A., Sijbers, J., Jeurissen, B., Janssens, T., and Van Dyck, P., Deep Learning-Enhanced Accelerated 2D TSE and 3D Super-Resolution Dixon TSE for Rapid Comprehensive Knee Joint Assessment, Investigative Radiology, In Press.

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