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W. J. Palenstijn, Bédorf, J., Sijbers, J., and Batenburg, K. J., “A distributed ASTRA Toolbox”, Advanced Structural and Chemical Imaging, vol. 2, no. 19, 2016.PDF icon Download paper (2.7 MB)
P. Paramonov, Francken, N., Renders, J., Iuso, D., Elberfeld, T., De Beenhouwer, J., and Sijbers, J., “CAD-ASTRA: A versatile and efficient mesh projector for X-ray tomography with the ASTRA-toolbox”, Optics Express, vol. 32, no. 3, pp. 3425-3439, 2024.PDF icon Download paper (11.29 MB)
P. M. Parizel, Van Goethem, J., van den Hauwe, L., Salgado, R., Vandervliet, E., and Leemans, A., “Characterization of brain tumors”, NeuroRadiology, vol. 47, pp. 80-83, 2005.
P. M. Parizel, Van Rompaey, V., Loock, V. R., Van Hecke, W., Van Goethem, J., Leemans, A., and Sijbers, J., “Influence of User-Defined Parameters on Diffusion Tensor Tractography of the Corticospinal Tract”, The Neuroradiology Journal, pp. 139-147, 2007.
H. R. P. Park, Verhelst, H., Quak, M., Jeurissen, B., and Krebs, R. M., “Associations between different white matter properties and reward-based performance modulation”, Brain Structure and Function, 2021.
E. Pechenkova, Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., Mershina, E., Sinitsyn, V., Van Ombergen, A., Jeurissen, B., Jillings, S., Laureys, S., Sijbers, J., Grishin, A., Chernikova, L., Naumov, I., Kornilova, L., Wuyts, F. L., Tomilovskaya, E., and Kozlovskaya, I., “Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI.”, Front Physiol, vol. 10, no. 761, pp. 1-23, 2019.
D. Pelt, Gursoy, D., Palenstijn, W. J., Sijbers, J., De Carlo, F., and Batenburg, K. J., “Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data”, Journal of Synchrotron Radiation, vol. 23, pp. 842-849, 2016.
D. Perrone, Jeurissen, B., Aelterman, J., Roine, T., Sijbers, J., Pizurica, A., Leemans, A., and Philips, W., “D-BRAIN: Anatomically Accurate Simulated Diffusion MRI Brain Data”, PlosOne, vol. 11, pp. 1-23, 2016.PDF icon Download paper (16.22 MB)
D. Perrone, Aelterman, J., Piżurica, A., Jeurissen, B., Philips, W., and Leemans, A., “The effect of Gibbs ringing artifacts on measures derived from diffusion MRI”, NeuroImage, vol. 120, pp. 441–455, 2015.
R. Pinho, Tournoy, K. G., and Sijbers, J., “Assessment and Stenting of Tracheal Stenosis using Deformable Shape Models”, Medical Image Analysis, vol. 15, pp. 250-266, 2011.
D. H. J. Poot, den Dekker, A. J., Achten, E., Verhoye, M., and Sijbers, J., “Optimal experimental design for Diffusion Kurtosis Imaging”, IEEE Transactions on Medical Imaging, vol. 29, pp. 819-829, 2010.PDF icon Download paper (1.12 MB)
D. H. J. Poot, Jeurissen, B., Bastiaensen, Y., Veraart, J., Van Hecke, W., Parizel, P. M., and Sijbers, J., “Super-Resolution for Multislice Diffusion Tensor Imaging”, Magnetic Resonance in Medicine, vol. 69, no. 1, pp. 103–113, 2013.PDF icon Download paper (1.04 MB)
D. H. J. Poot, Pintjens, W., Verhoye, M., Van Der Linden, A., and Sijbers, J., “Improved B0 field map estimation for high field EPI”, Magnetic Resonance Imaging, vol. 28, pp. 441-450, 2010.PDF icon Download paper (1.29 MB)
A. Postnov, De Schutter, T. T., Sijbers, J., Karperien, M., and De Clerck, N., “Glucocorticoid-Induced Osteoporosis in Growing Mice Is Not Prevented by Simultaneous Intermittent PTH Treatment”, Calcified Tissue International, vol. 85, pp. 530-537, 2009.PDF icon Download paper (344.96 KB)
J. Praet, Manyakov, N., Muchene, L., Mai, Z., Terzopoulos, V., De Backer, S., Torremans, A., Guns, P. - J., Van De Casteele, T., Bottelbergs, A., Van Broeck, B., Sijbers, J., Smeets, D., Shkedy, Z., Bijnens, L., Pemberton, D., Schmidt, M., Van Der Linden, A., and Verhoye, M., “Diffusion kurtosis imaging allows the early detection and longitudinal follow-up of amyloid β-induced pathology.”, Alzheimer's Research & Therapy , vol. 10, no. 1, pp. 1-16, 2018.
A. Presenti, Liang, Z., Alves Pereira, L. F., Sijbers, J., and De Beenhouwer, J., “Automatic anomaly detection from X-ray images based on autoencoder”, Nondestructive Testing and Evaluation, vol. 37, no. 5, 2022.
A. Presenti, Sijbers, J., and De Beenhouwer, J., “Dynamic few-view X-ray imaging for inspection of CAD-based objects”, Expert Systems with Applications, vol. 180, p. 115012, 2021.
A. Presenti, Liang, Z., Alves Pereira, L. F., Sijbers, J., and De Beenhouwer, J., “Fast and accurate pose estimation of additive manufactured objects from few X-ray projections”, Expert Systems With Applications, vol. 213, no. 118866, pp. 1-10, 2023.
P. Pullens, Bladt, P., Sijbers, J., Maas, A. I. R., and Parizel, P. M., “A safe, cheap and easy-to-use isotropic diffusion phantom for clinical and multicenter studies”, Medical Physics, vol. 44, no. 3, pp. 1063–1070, 2017.
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J. Rajan, Veraart, J., Van Audekerke, J., Verhoye, M., and Sijbers, J., “Nonlocal maximum likelihood estimation method for denoising multiple-coil magnetic resonance images.”, Magnetic resonance imaging, vol. 30, no. 10, pp. 1512-8, 2012.
J. Rajan, Jeurissen, B., Verhoye, M., Van Audekerke, J., and Sijbers, J., “Maximum likelihood estimation based denoising of magnetic resonance images using restricted local neighborhoods”, Physics in Medicine and Biology, vol. 56, pp. 5221-5234, 2011.PDF icon Download full paper (643.93 KB)
J. Rajan, den Dekker, A. J., and Sijbers, J., “A new non local maximum likelihood estimation method for Rician noise reduction in Magnetic Resonance images using the Kolmogorov-Smirnov test”, Signal Processing, vol. 103, pp. 16-23, 2014.
J. Rajan, Veraart, J., Van Audekerke, J., Verhoye, M., and Sijbers, J., “Nonlocal maximum likelihood estimation method for denoising multiple-coil magnetic resonance images”, Magnetic Resonance Imaging, vol. 30, no. 10, pp. 1512-1518, 2012.PDF icon Download full paper (1.11 MB)
J. Rajan, Poot, D. H. J., Juntu, J., and Sijbers, J., “Noise measurement from magnitude MRI using local estimates of variance and skewness.”, Physics in medicine and biology, vol. 55, no. 16, pp. N441-9, 2010.PDF icon Download paper (219.85 KB)
G. Ramos-Llordén, den Dekker, A. J., Van Steenkiste, G., Jeurissen, B., Vanhevel, F., Van Audekerke, J., Verhoye, M., and Sijbers, J., “A unified Maximum Likelihood framework for simultaneous motion and T1 estimation in quantitative MR T1 mapping”, IEEE Transactions on Medical Imaging, vol. 36, no. 2, pp. 433 - 446, 2017.

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