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Journal Article
J. Gonnissen, De Backer, A., den Dekker, A. J., Sijbers, J., and Van Aert, S., Atom-counting in High Resolution Electron Microscopy: TEM or STEM - that’s the question, Ultramicroscopy, vol. 147, pp. 112–120, 2017.
W. Van Aarle, Palenstijn, W. J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K. J., and Sijbers, J., The ASTRA Toolbox: a platform for advanced algorithm development in electron tomography, Ultramicroscopy, vol. 157, pp. 35–47, 2015.PDF icon Download paper (3.47 MB)
B. G. Booth, Keijsers, N. L. W., Sijbers, J., and Huysmans, T., An assessment of the information lost when applying data reduction techniques to dynamic plantar pressure measurements, Journal of Biomechanics , vol. 87, pp. 161-166, 2019.
P. Van Dyck, Zazulia, K., Smekens, C., Heusdens, C. H. W., Janssens, T., and Sijbers, J., Assessment of Anterior Cruciate Ligament Graft Maturity With Conventional Magnetic Resonance Imaging, The Orthopaedic Journal of Sports Medicine, vol. 7, no. 6, pp. 1-9, 2019.PDF icon Download paper (202.39 KB)
R. Pinho, Tournoy, K. G., and Sijbers, J., Assessment and Stenting of Tracheal Stenosis using Deformable Shape Models, Medical Image Analysis, vol. 15, pp. 250-266, 2011.
B. Bosmans, Huysmans, T., Lopes, P., Verhoelst, E., Dezutter, T., de Jaegere, P., Sijbers, J., Vander Sloten, J., and Bosmans, J., Aortic root sizing for transcatheter aortic valve implantation using a shape model parameterisation, Medical & Biological Engineering & Computing, vol. 57, no. 10, pp. 2081–2092, 2019.PDF icon Download paper (1.79 MB)
A. Bernat, Huysmans, T., Van Glabbeek, F., Sijbers, J., Gielen, J., and Van Tongel, A., The anatomy of the clavicle: A Three-dimensional Cadaveric Study, Clinical anatomy, vol. 27, no. 5, pp. 712–723, 2014.PDF icon Download paper (554.93 KB)
B. Fröhler, Elberfeld, T., Möller, T., Hege, H. - C., De Beenhouwer, J., Sijbers, J., Kastner, J., and Heinzl, C., Analysis and Comparison of Algorithms for the Tomographic Reconstruction of Curved Fibres, Nondestructive Testing and Evaluation, vol. 35, no. 3, pp. 328-341, 2020.
W. Jacquet, Nyssen, E., Sun, Y., De Munter, S., Sijbers, J., and Politis, C., Alveolar Nerve Unfolding Technique for Synoptic Analysis: Visualization and Quantification of Inferior Alveolar Nerve Tracings in Three-dimensional Cone-Beam Computed Tomography., The Journal of craniofacial surgery, vol. 24, no. 4, pp. e374-7, 2013.
A. Van Ombergen, Heine, L., Jillings, S., Roberts, E., Jeurissen, B., Van Rompaey, V., Mucci, V., Vanhecke, S., Sijbers, J., Vanhevel, F., Sunaert, S., Bahri, M. Ali, Parizel, P. M., Van de Heyning, P. H., Laureys, S. S. L., and Wuyts, F. L., Altered functional brain connectivity in patients with visually induced dizziness, NeuroImage: Clinical, vol. 14, pp. 538–545, 2017.
B. T. Antonsen, Jiang, Y., Veraart, J., Qu, H., Nguyen, H. P., Sijbers, J., Von Hörsten, S., Johnson, A. G., and Leergaard, T. B., Altered diffusion tensor imaging measurements in aged transgenic Huntington disease rats., Brain structure & function, vol. 218, no. 3, pp. 767-78, 2013.PDF icon Download paper (645.02 KB)
E. Pechenkova, Nosikova, I., Rumshiskaya, A., Litvinova, L., Rukavishnikov, I., Mershina, E., Sinitsyn, V., Van Ombergen, A., Jeurissen, B., Jillings, S., Laureys, S., Sijbers, J., Grishin, A., Chernikova, L., Naumov, I., Kornilova, L., Wuyts, F. L., Tomilovskaya, E., and Kozlovskaya, I., Alterations of Functional Brain Connectivity After Long-Duration Spaceflight as Revealed by fMRI., Front Physiol, vol. 10, no. 761, pp. 1-23, 2019.
F. Bleichrodt, De Beenhouwer, J., Sijbers, J., and Batenburg, K. J., Aligning Projection Images from Binary Volumes, Fundamenta Informaticae, vol. 135, pp. 1-22, 2014.
A. Leemans, Sijbers, J., De Backer, S., Vandervliet, E., and Parizel, P. M., Affine Coregistration of Diffusion Tensor Magnetic Resonance Images Using Mutual Information, Lecture Notes in Computer Science, vol. 3708, pp. 523-530, 2005.PDF icon Download full paper (1.26 MB)
K. J. Batenburg, De Carlo, F., Mancini, L., and Sijbers, J., Advanced X-ray tomography: experiment, modeling, and algorithms, Measurement Science and Technology, vol. 29, no. 8, p. 080101, 2018.
A. Dabravolski, Batenburg, K. J., and Sijbers, J., Adaptive zooming in X-ray computed tomography, Journal of X-Ray Science and Technology, vol. 22, pp. 77-89, 2014.PDF icon Download paper (3.75 MB)
K. J. Batenburg and Sijbers, J., Adaptive thresholding of tomograms by projection distance minimization, Pattern Recognition, vol. 42, pp. 2297-2305, 2009.PDF icon Download paper (1.05 MB)
J. Sijbers, den Dekker, A. J., Verhoye, M., Van Der Linden, A., and Van Dyck, D., Adaptive anisotropic noise filtering for magnitude MR data, Magnetic Resonance Imaging, vol. 17, pp. 1533-1539, 1999.PDF icon Download full paper (366 KB)
T. Roelandts, Batenburg, K. J., Biermans, E., Kubel, C., Bals, S., and Sijbers, J., Accurate segmentation of dense nanoparticles by partially discrete electron tomography, Ultramicroscopy, vol. 114, pp. 96-105, 2012.PDF icon Download paper (1.71 MB)
M. Naeyaert, Aelterman, J., Golkov, V., Cremers, D., Pizurica, A., Sijbers, J., and Verhoye, M., Accelerating in vivo fast spin echo high angular resolution diffusion imaging with an isotropic resolution in mice through compressed sensing, Magnetic Resonance in Medicine, In Press.
J. Soons, Danckaers, F., Keustermans, W., Huysmans, T., Sijbers, J., Casselman, J. W., and Dirckx, J. J. J., 3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT, Hearing research, vol. 340, pp. 79-88, 2016.
K. J. Batenburg, Bals, S., Sijbers, J., Kubel, C., Midgley, P. A., Hernandez, J. C., Kaiser, U., Encina, E. R., Coronado, E. A., and Van Tendeloo, G., 3D imaging of nanomaterials by discrete tomography, Ultramicroscopy, vol. 109, pp. 730-740, 2009.
Editor of Conference Proceedings
D. Frenkel, De Beenhouwer, J., and Sijbers, J., An adaptive probability map for the Discrete Algebraic Reconstruction Technique, 10th Conference on Industrial Computed Tomography (ICT 2020). 2020.
Conference Paper
J. Sanctorum, De Beenhouwer, J., and Sijbers, J., X-ray Phase-contrast Simulations of Fibrous Phantoms using GATE, in 2018 IEEE Nuclear Science Symposium and Medical Imaging Conference, Sydney, Australia, 2018.PDF icon Download poster (884.48 KB)
A. Leemans, Sijbers, J., Verhoye, M., Van Der Linden, A., and Van Dyck, D., White Matter Fiber Bundle Coregistration for Diffusion Tensor Magnetic Resonance Tractography, in 13th Annual Meeting - Section for Magnetic Resonance Technologists, Kyoto, Japan, 2004.