Publications

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Journal Article
F. Bleichrodt, De Beenhouwer, J., Sijbers, J., and Batenburg, K. J., “Aligning Projection Images from Binary Volumes”, Fundamenta Informaticae, vol. 135, pp. 1-22, 2014.
A. Leemans, Sijbers, J., De Backer, S., Vandervliet, E., and Parizel, P. M., “Affine Coregistration of Diffusion Tensor Magnetic Resonance Images Using Mutual Information”, Lecture Notes in Computer Science, vol. 3708, pp. 523-530, 2005.PDF icon Download full paper (1.26 MB)
P. Reischig, King, A., Nervo, L., Viganó, N., Guilhem, Y., Palenstijn, W. J., Batenburg, K. J., Preuss, M., and Ludwig, W., “Advances in X-ray diffraction contrast tomography: flexibility in the setup geometry and application to multiphase materials”, Journal of Applied Crystallography, vol. 46, no. 2, pp. 297 - 311, 2013.
K. J. Batenburg, De Carlo, F., Mancini, L., and Sijbers, J., “Advanced X-ray tomography: experiment, modeling, and algorithms”, Measurement Science and Technology, vol. 29, no. 8, p. 080101, 2018.
W. Guo, Hung, C. - C., Scheunders, P., Kuo, B. - C., Lan, Y., and Ma, Z., “Advanced techniques for computational and information sciences”, Mathematical Problems in Engineering, vol. 2016, 2016.
B. Goris, Roelandts, T., Batenburg, K. J., Heidari Mezerji, H., and Bals, S., “Advanced reconstruction algorithms for electron tomography: from comparison to combination”, Ultramicroscopy, vol. 127, pp. 40–47, 2013.
S. Van Aert, De Backer, A., Martinez, G. T., den Dekker, A. J., Van Dyck, D., Bals, S., and Van Tendeloo, G., “Advanced electron crystallography through model-based imaging”, IUCrJ, vol. 3, 2016.
J. Renders, Sijbers, J., and De Beenhouwer, J., “Adjoint image warping using multivariate splines with application to 4D-CT”, Medical Physics, vol. 48, no. 10, pp. 6362-6374, 2021.PDF icon Download paper (6.28 MB)
B. Shafieizargar, Jeurissen, B., Poot, D. H. J., Klein, S., Van Audekerke, J., Verhoye, M., den Dekker, A. J., and Sijbers, J., “ADEPT: Accurate Diffusion EPI with multi-contrast shoTs”, Magnetic Resonance in Medicine, vol. 89, no. 1, pp. 396-410, 2023.PDF icon Download paper (5.82 MB)
A. Dabravolski, Batenburg, K. J., and Sijbers, J., “Adaptive zooming in X-ray computed tomography”, Journal of X-Ray Science and Technology, vol. 22, pp. 77-89, 2014.PDF icon Download paper (3.75 MB)
K. J. Batenburg and Sijbers, J., “Adaptive thresholding of tomograms by projection distance minimization”, Pattern Recognition, vol. 42, pp. 2297-2305, 2009.PDF icon Download paper (1.05 MB)
J. Sijbers, den Dekker, A. J., Verhoye, M., Van Der Linden, A., and Van Dyck, D., “Adaptive anisotropic noise filtering for magnitude MR data”, Magnetic Resonance Imaging, vol. 17, pp. 1533-1539, 1999.PDF icon Download full paper (366 KB)
B. Huyge, Vanthienen, P. - J., Six, N., Sijbers, J., and De Beenhouwer, J., “Adapting an XCT-scanner to enable edge illumination X-ray phase contrast imaging”, e-Journal of Nondestructive Testing, vol. 28, no. 3, 2023.
W. Van den Broek, Verbeeck, J., De Backer, S., Scheunders, P., and Schryvers, D., “Acquisition of the EELS data cube by tomographic reconstruction”, Ultramicroscopy, vol. 106, pp. 269-276, 2006.
T. Roelandts, Batenburg, K. J., Biermans, E., Kubel, C., Bals, S., and Sijbers, J., “Accurate segmentation of dense nanoparticles by partially discrete electron tomography”, Ultramicroscopy, vol. 114, pp. 96-105, 2012.PDF icon Download paper (1.71 MB)
W. Van Aarle, Ludwig, W., King, A., and Penumadu, D., “An accurate projection model for diffraction image formation and inversion using a polychromatic cone beam”, Journal of Applied Crystallography, vol. 48, pp. 334-343, 2015.
G. Thoonen, Hufkens, K., Vanden Borre, J., Spanhove, T., and Scheunders, P., “Accuracy assessment of contextual classification results for vegetation mapping”, International Journal of Applied Earth Observation and Geoinformation, vol. 15, pp. 7 - 15, 2012.
M. Naeyaert, Aelterman, J., Golkov, V., Cremers, D., Pizurica, A., Sijbers, J., and Verhoye, M., “Accelerating in vivo fast spin echo high angular resolution diffusion imaging with an isotropic resolution in mice through compressed sensing”, Magnetic Resonance in Medicine, vol. 85, no. 3, pp. 1397-1413, 2021.
U. Roine, Roine, T., Salmi, J., Nieminen-von Wendt, T., Tani, P., Leppämäki, S., Rintahaka, P., Caeyenberghs, K., Leemans, A., and Sams, M., “Abnormal wiring of the connectome in adults with high-functioning autism spectrum disorder”, Molecular Autism, vol. 6, p. 65, 2015.PDF icon Download paper (1.64 MB)
D. Kazantsev, Thompson, W. M., Lionheart, W. R. B., Van Eyndhoven, G., Kaestner, A. P., Dobson, K. J., Withers, P. J., and Lee, P. D., “4D-CT reconstruction with unified spatial-temporal patch-based regularization”, Inverse Problems and Imaging, vol. 9, no. 2, pp. 447-467, 2015.
R. Heylen, Thanki, A., Verhees, D., Iuso, D., De Beenhouwer, J., Sijbers, J., Witvrouw, A., Haitjema, H., and Bey-Temsamani, A., “3D total variation denoising in X-CT imaging applied to pore extraction in additively manufactured parts”, Measurement Science and Technology, vol. 33, no. 4, pp. 1-12, 2022.
J. Soons, Danckaers, F., Keustermans, W., Huysmans, T., Sijbers, J., Casselman, J. W., and Dirckx, J. J. J., “3D morphometric analysis of the human incudomallear complex using clinical cone-beam CT”, Hearing research, vol. 340, pp. 79-88, 2016.
K. J. Batenburg, Bals, S., Sijbers, J., Kubel, C., Midgley, P. A., Hernandez, J. C., Kaiser, U., Encina, E. R., Coronado, E. A., and Van Tendeloo, G., “3D imaging of nanomaterials by discrete tomography”, Ultramicroscopy, vol. 109, pp. 730-740, 2009.

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