Publications

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Journal Article
S. Van der Jeught, Sijbers, J., and Dirckx, J. J. J., Fast Fourier-based phase unwrapping on the graphics processing unit in real-time imaging applications, Journal of Imaging, vol. 1, pp. 31-44, 2015.PDF icon Download paper (1.35 MB)
W. Van Aarle, Palenstijn, W. J., Cant, J., Janssens, E., Bleichrodt, F., Dabravolski, A., De Beenhouwer, J., Batenburg, K. J., and Sijbers, J., Fast and Flexible X-ray Tomography Using the ASTRA Toolbox, Optics Express, vol. 24, pp. 25129-25147, 2016.PDF icon Download paper (8.34 MB)
P. Lo, van Ginneken, B., Reinhardt, J. M., Yavarna, T., de Jong, P. A., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijańska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., van Rikxoort, E. M., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H., and de Bruijne, M., Extraction of airways from CT (EXACT'09)., IEEE Transactions on Medical Imaging, vol. 31, no. 11, pp. 2093-107, 2012.
J. Hamaide, De Groof, G., Van Steenkiste, G., Jeurissen, B., Van Audekerke, J., Naeyaert, M., Van Ruijssevelt, L., Cornil, C., Sijbers, J., Verhoye, M., and Van Der Linden, A., Exploring sex differences in the adult zebra finch brain: In vivo diffusion tensor imaging and ex vivo super-resolution track density imaging, NeuroImage, vol. 146, pp. 789-803, 2017.
A. Van Tongel, Huysmans, T., Bernat, A., Piepers, I., Sijbers, J., Van Glabbeek, F., and De Wilde, L., Evaluation of prominence of straight plates and precontoured clavicle plates using automated plate-to-bone fitting, Acta Orthopaedica Belgica, vol. 80, no. 3, pp. 301-308, 2014.PDF icon Download paper (582.85 KB)
D. Lacko, Huysmans, T., Parizel, P. M., De Bruyne, G., Verwulgen, S., Van Hulle, M. M., and Sijbers, J., Evaluation of an anthropometric shape model of the human scalp, Applied Ergonomics, vol. 48, pp. 70-85, 2015.PDF icon Paper (3.63 MB)File Shape matrix (cfr section 2.1.1) (36.93 MB)File Measurement matrix (cfr section 2.2.1) (20.05 KB)File Labeled measurements (cfr section 2.2.1) (47.63 KB)
A. J. den Dekker, Gonnissen, J., De Backer, A., Sijbers, J., and Van Aert, S., Estimation of unknown structure parameters from high-resolution (S)TEM images: what are the limits?, Ultramicroscopy, vol. 134, pp. 34-43, 2013.
J. Sijbers, den Dekker, A. J., Van Audekerke, J., Verhoye, M., and Van Dyck, D., Estimation of the noise in magnitude MR images, Magnetic Resonance Imaging, vol. 16, pp. 87-90, 1998.PDF icon Download paper (64.9 KB)
D. Lacko, Vleugels, J., Fransen, E., Huysmans, T., De Bruyne, G., Van Hulle, M. M., Sijbers, J., and Verwulgen, S., Ergonomic design of an EEG headset using 3D anthropometry, Applied Ergonomics, vol. 58, pp. 128–136, 2017.
J. Goyens, Vasilopoulou-Kampitsi, M., Claes, R., Sijbers, J., and Mancini, L., Enhanced contrast in X-ray microtomographic images of the membranous labyrinth using different X-ray sources and scanning modes, Journal of Anatomy, vol. 233, p. 770--782, 2018.PDF icon Download paper (1.44 MB)
E. Van de Casteele, Van Dyck, D., Sijbers, J., and Raman, E., An energy-based beam hardening model in tomography, Physics in Medicine and Biology, vol. 47, pp. 4181-4190, 2002.PDF icon Download full paper (203.21 KB)
W. Van Hecke, Leemans, A., Sage, C. A., Veraart, J., Sijbers, J., and Sunaert, S., The effect of template selection on diffusion tensor voxel based analysis results, NeuroImage, vol. 55, pp. 566-573, 2011.
A. Van Ombergen, Demertzi, A., Tomilovskaya, E., Jeurissen, B., Sijbers, J., Kozlovskaya, I. B., Parizel, P. M., Van de Heyning, P. H., Sunaert, S., Laureys, S. S. L., and Wuyts, F. L., The effect of spaceflight and microgravity on the human brain, Journal of Neurology, vol. 246, no. 1, pp. 18-22, 2017.
W. Keustermans, Huysmans, T., Schmelzer, B., Sijbers, J., and Dirckx, J. J. J., The effect of nasal shape on the thermal conditioning of inhaled air: Using clinical tomographic data to build a large-scale statistical shape model, Computers in Biology and Medicine, vol. 117, no. 103600, pp. 1-13, 2020.
F. Bleichrodt, van Leeuwen, T., Palenstijn, W. J., Van Aarle, W., Sijbers, J., and Batenburg, K. J., Easy implementation of advanced tomography algorithms using the ASTRA toolbox with Spot operators, Numerical Algorithms, vol. 71, pp. 673-697, 2016.
V. Van Nieuwenhove, De Beenhouwer, J., De Carlo, F., Mancini, L., Marone, F., and Sijbers, J., Dynamic intensity normalization using eigen flat fields in X-ray imaging, Optics Express, vol. 23, no. 21, pp. 27975-27989, 2015.Package icon Download Matlab code (2.92 MB)PDF icon Download paper (1.68 MB)
A. Dabravolski, Batenburg, K. J., and Sijbers, J., Dynamic Angle Selection in X-ray Computed Tomography, Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, vol. 324, pp. 17-24, 2014.
K. J. Batenburg, Palenstijn, W. J., Balazs, P., and Sijbers, J., Dynamic angle selection in binary tomography, Computer Vision and Image Understanding, vol. 117, no. 5, pp. 306–318, 2013.PDF icon Download paper (2.71 MB)
T. De Bondt, Van Hecke, W., Veraart, J., Leemans, A., Sijbers, J., Sunaert, S., Jacquemyn, Y., and Parizel, P. M., Does the use of hormonal contraceptives cause microstructural changes in cerebral white matter? Preliminary results of a DTI and tractography study., European radiology, vol. 23, no. 1, pp. 57-64, 2013.PDF icon Download paper (411.18 KB)
W. J. Palenstijn, Bédorf, J., Sijbers, J., and Batenburg, K. J., A distributed ASTRA Toolbox, Advanced Structural and Chemical Imaging, vol. 2, no. 19, 2016.PDF icon Download paper (2.7 MB)
A. Smolders, Martino, D. F., Staeren, N., Scheunders, P., Sijbers, J., Goebel, R., and Formisano, E., Dissecting cognitive stages with time-resolved fMRI data: a comparison of fuzzy clustering and independent component analysis, Magnetic Resonance Imaging, vol. 25, pp. 860-868, 2007.PDF icon Download paper (658.36 KB)
H. Segers, Palenstijn, W. J., Batenburg, K. J., and Sijbers, J., Discrete Tomography in MRI: a Simulation Study, Fundamenta Informaticae, vol. 125, no. 3-4, pp. 223-237, 2013.
E. Van de Casteele, Perilli, E., Van Aarle, W., Reynolds, K., and Sijbers, J., Discrete tomography in an in vivo small animal bone study, Journal of Bone and Mineral Metabolism, vol. 36, no. 1, pp. 40–53, 2018.
P. Van Dyck, Froeling, M., De Smet, E., Pullens, P., Torfs, M., Verdonck, P., Sijbers, J., Parizel, P. M., and Jeurissen, B., Diffusion Tensor Imaging of the Anterior Cruciate Ligament Graft, Journal of Magnetic Resonance Imaging, vol. 46, no. 5, pp. 1423–1432, 2017.
P. Van Dyck, Froeling, M., Heusdens, C. H. W., Sijbers, J., Ribbens, A., and Billiet, T., Diffusion Tensor Imaging of the Anterior Cruciate Ligament Following Primary Repair with Internal Bracing: a Longitudinal Study, Journal of Orthopaedic Research , 2020.

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