Jan Sijbers

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Journal Article
M. Siqueira Pinto, Anania, V., Paolella, R., Smekens, C., Billiet, T., Janssens, T., den Dekker, A. J., Sijbers, J., Guns, P. - J., and Van Dyck, P., “Harmonization of diffusion MRI on healthy subjects using NeuroCombat and LongCombat: a B-Q MINDED Brain Intra-and Inter-Scanner Study”, Frontiers in Neuroscience, vol. 19, 2025.
Thesis
M. Siqueira Pinto, “Improved Diagnosis and Prognosis of Mild Traumatic Brain Injury via Harmonised Diffusion MRI”, 2025.
Conference Paper
J. Deng, Meenaketan, B. Linkoon P., Takalloo, S. Ebrahimi, Chai, Y. Chin, Torfs, T., Braeken, D., De Beenhouwer, J., and Sijbers, J., “In-depth imaging of in-vitro tissue models using electrical impedance tomography”, in iCT 2025 - 14th Conference on Industrial Computed Tomography, 2025, vol. 4 - 7 February.
Journal Article
H. Khan, Giraldo, D., Woodruff, H. C., Werthen-Brabants, L., Mali, S. Atul, Amirrajab, S., De Brouwer, E., Popescu, V., Van Wijmeersch, B., Gerlach, O., Sijbers, J., Peeters, L. M., and Lambin, P., “Leveraging Hand-Crafted Radiomics on Multicenter FLAIR MRI for Predicting Disability Worsening in People with Multiple Sclerosis”, Front. Neurosci., vol. 19, 2025.
Y. Huybrechts, De Ridder, R., Bergen, D., De Samber, B., Boudin, E., Tonelli, F., Knapen, D., Vergauwen, L., Schepers, D., Van Dijck, E., Tong, Q., Verhulst, A., De Beenhouwer, J., Sijbers, J., Hammond, C., Forlino, A., Mortier, G., Coucke, P., P Witten, E., Kwon, R. Young, Willaert, A., Hendrickx, G., and Van Hul, W., “Loss of the Ubiquitin-Associated Domain of sqstm1/p62 in Zebrafish Causes a Phenotype Resembling Paget’s Disease of Bone”, Calcified Tissue International, vol. 116, no. 1, pp. 1-15, 2025.
J. Sanctorum, Sijbers, J., and De Beenhouwer, J., “Multi-contrast benchmarking of edge illumination Monte Carlo simulations using virtual gratings”, Journal of Applied Physics, vol. 137, no. 10, p. 104904, 2025.
K. Duquesne, Van Oevelen, A., Sijbers, J., Van Paepegem, W., and Audenaert, E., “A novel Soft Tissue-Integrated Kinematic Solver for skeletal motion: Validation and applications”, Computer Methods and Programs in Biomedicine, vol. 265, 2025.
Patent
J. De Beenhouwer and Sijbers, J., “A PHASE‑CONTRAST X‑RAY IMAGING SYSTEM FOR OBTAINING A DARK‑FIELD IMAGE AND A METHOD THEREFOR”, U.S. Patent EP 4 351 425 B12025.PDF icon Download patent (547.58 KB)
Conference Paper
H. Le, Bossuyt, C., Escoda, J., Costin, M., De Beenhouwer, J., and Sijbers, J., “Proximal Neural Networks based reconstruction for few-view CT applications”, in 14th Conference on Industrial Computed Tomography (iCT), 4 - 7 February 2025, Antwerp, Belgium, 2025.PDF icon Download paper (4.27 MB)
Journal Article
T. Van De Looverbosch, De Beuckeleer, S., De Smet, F., Sijbers, J., and De Vos, W., “Proximity Adjusted Centroid Mapping for Accurate Detection of Nuclei in Dense 3D Cell Systems”, Computers in Biology and Medicine, vol. 185, p. 109561, 2025.
Thesis
J. Grammens, “Shaping the future: 3D knee morphology analysis and predictive models for data-driven patient selection”, 2025.PDF icon Download thesis (4.98 MB)
Conference Paper
F. Linsen, Iuso, D., and Sijbers, J., “Single X-ray Projection Material Decomposition using a Mesh Projector”, in 14th Conference on Industrial Computed Tomography (iCT), 4 - 7 February 2025, Antwerp, Belgium (iCT 2025), 2025.PDF icon Download paper (857.7 KB)
Journal Article
M. Yosifov, Fröhler, B., Sijbers, J., De Beenhouwer, J., Kastner, J., and Heinzl, C., “Superimposing Synthetic Defects into Real XCT Data and Segmentation-Based Comparison for Advanced Probability of Detection Evaluation”, Journal of Nondestructive Evaluation , vol. 44, no. 119, 2025.
J. Van der Rauwelaert, Bossuyt, C., Verleden, S., and Sijbers, J., “SwinIR-based Dual-Domain Reconstruction for Sparse-View Computed Tomography”, Journal of Nondestructive Evaluation, vol. 44, no. 111, 2025.
Thesis
P. - J. Vanthienen, “Towards adaptive multi-resolution edge illumination X-ray phase contrast imaging”, 2025.
Conference Paper
L. - P. Lumbeeck, Paramonov, P., Sijbers, J., and De Beenhouwer, J., “About rapid phase-wrapping in terahertz phase contrast imaging”, in SPIE, 2024, vol. 13141, pp. 69-73.
Conference Abstract
J. Lüken, Fleischmann, C., Sijbers, J., and De Beenhouwer, J., “AdAPTS: An Adaptive Atom Probe Tomography Simulation Library”, Microscopy and Microanalysis, vol. 30, no. 1. 2024.
J. Lüken, Fleischmann, C., Sijbers, J., and De Beenhouwer, J., “AdAPTS: An Adaptive Atom Probe Tomography Simulation Library”, APT User Meeting. 2024.
Journal Article
J. Grammens, Van Haver, A., Lumban-Gaol, I., Danckaers, F., Verdonk, P., and Sijbers, J., “Automated landmark annotation for morphometric analysis of distal femur and proximal tibia”, Journal of Imaging, vol. 10, no. 4, 2024.PDF icon Download paper (2.06 MB)
Thesis
P. Lopes, “Automating the planning of transcatheter Mitral Valve Interventions”, 2024.
Journal Article
P. Paramonov, Francken, N., Renders, J., Iuso, D., Elberfeld, T., De Beenhouwer, J., and Sijbers, J., “CAD-ASTRA: A versatile and efficient mesh projector for X-ray tomography with the ASTRA-toolbox”, Optics Express, vol. 32, no. 3, pp. 3425-3439, 2024.PDF icon Download paper (11.29 MB)
Conference Paper
L. - P. Lumbeeck, Paramonov, P., Sijbers, J., and De Beenhouwer, J., “Coherent detection terahertz imaging with a continuous wave source”, in SPIE, 2024, vol. 13141, pp. 63-68.
C. Bossuyt, den Dekker, A. J., Iuso, D., Le Hoang, T., Escoda, J., Costin, M., Sijbers, J., and De Beenhouwer, J., “Deep image prior for sparse-view reconstruction in static, rectangular multi-source x-ray CT systems for cargo scanning”, in SPIE Developments in X-Ray Tomography XV, 2024, vol. 13152.
Thesis
M. A. Zampini, “Development of spoiled gradient echo sequences for MRI relaxometry”, 2024.PDF icon Download PhD thesis (17.25 MB)
Journal Article
J. Renders, Mancini, L., De Beenhouwer, J., and Sijbers, J., “Direct reconstruction of wet foam from sparse-view, dynamic X-ray CT scans”, Advanced Engineering Materials, vol. 2400957, pp. 1-10, 2024.PDF icon Download paper (2.77 MB)

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